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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0248200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7832016:7833726:-1 gene:Os03g0248200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 family protein, expressed. (Os03t0248200-01)
Sequence

TGTACGCCGTGCGTTATTCTCCTTCTCTCCTCCCTGTACCTCCTCCGTCTCTTCGTCGAC
GCCCGCCGCAACCTGCCGCCGGGTCCCCGCCCGCAGCCGCTCATCGGCAACATCCTCGAC
CTCGGCTCCCAGCCGCACCGCTCCCTCGCGCGCCTCGCGGGGCGCTATGGCCCGCTCATG
ACGCTCCGCCTCGGCACCGTCACCACCGTCGTCGCCTCCTCCCCGGGCGCCGCCCGCGAC
ATCCTCCAGCGCCACGACGCCGCCTTCTCCGCGCGCTCCGTGCCGGACGCCGCCCGCGCG
TGCGGGCACGACGGCTTCTCCATGGGCATGCTCCCGCCCAGCAGCGCCCTGTGGCGCGCG
CTCCGCAGGGTGTGCGCCGCGGAGCTCTTCGCGCCGCGCAGCCTCGACGCGCACCAGCGC
CTCCGCCGGGACAAGGTGCGCCAGCTCGTGTCCCACGTCGCGCGCCTGGCGCGCGACGGC
GCGGCCGTCGACGTCGGCCGCGCCGCGTTCACGGCTTCCCTGAACCTGCTCTCCAGCACC
ATCTTCTCCGCCGACCTCGCGGATTTCGGCGACGCCCGAGCTGAGTCGTCGGTGGGGGAC
TTAAGGGACTTGATCTCGGAGTTCACCATCGTCGTCGGGGTGCCGAACGTGTCGGACTTC
TTCCCGGCCGTCGCGCCGCTCGACCCGCAGCGGCTGCGGAGGCGGGTGGCGAGGGTGTTC
GAGCGGCTGCAGGCCGTGTTCGACGGGCACATCGAACGGCGCCTGCGGGACCGCGCTGCC
GGGGAGCCGCCCAAGAACGATTTCCTGGACGCTTTGCTCGACTACCGCAGCCCGGAGGAT
GGCCGGGGTTTTGATCGGCCAACGCTACAGTTTCTGTTTACGGATTTGTTTAGCGCGGGA
AGTGATACAAGCGCAGTAACTGTAGAATGGGCAATGGCTCAGCTGCTACAGAACCCACCA
GCAATGGCGAAAGCTCGTGAGGAGCTTGCTCGAGTGATTGGCTCCAAACAAGAAATTGAG
GAATCCGACATTAGCCAGCTCAAGTACCTCGAAGCCGTCGTGAAGGAGACATTACGGCTT
CATCCTCCGGCGCCATTTCTGCTTCCTCACCAAGCCGAAACGACCACACAGGTTGGTGGC
TACACGGTGCCCAAGGGCACCCGTGTTCTGGTGAATGTTTGGGCGATTGGTCGGGACAGC
AAGGTGTGGTCTGACCCTGACAAGTTCATGCCGGAGAGGTTCCTGCAGAGCGAGGTGGAC
CTGCGTGGCCGTGACTTCGAACTGATTCCATTTGGCTCTGGTCGAAGGATCTGTCCGGGG
TTGCCGCTGGCTGTTCGCATGGTGTACCTGATGCTCGCGTCGTTGCTGCACCGGTTTGAG
TGGAGGCTTCTACCGGAGGTCGAGAAGAACGGGGTGGACATGGCGGAGAAGTTCGGGATG
ATACTAGAGTTGGCTACGCCACTCCGGGCTGTTGCTATACCAGTTTAA

Peptide Sequence

PEP ID

Os03t0248200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7832016:7833726:-1 gene:Os03g0248200 transcript:Os03t0248200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 family protein, expressed. (Os03t0248200-01)
Sequence

CTPCVILLLSSLYLLRLFVDARRNLPPGPRPQPLIGNILDLGSQPHRSLARLAGRYGPLM
TLRLGTVTTVVASSPGAARDILQRHDAAFSARSVPDAARACGHDGFSMGMLPPSSALWRA
LRRVCAAELFAPRSLDAHQRLRRDKVRQLVSHVARLARDGAAVDVGRAAFTASLNLLSST
IFSADLADFGDARAESSVGDLRDLISEFTIVVGVPNVSDFFPAVAPLDPQRLRRRVARVF
ERLQAVFDGHIERRLRDRAAGEPPKNDFLDALLDYRSPEDGRGFDRPTLQFLFTDLFSAG
SDTSAVTVEWAMAQLLQNPPAMAKAREELARVIGSKQEIEESDISQLKYLEAVVKETLRL
HPPAPFLLPHQAETTTQVGGYTVPKGTRVLVNVWAIGRDSKVWSDPDKFMPERFLQSEVD
LRGRDFELIPFGSGRRICPGLPLAVRMVYLMLASLLHRFEWRLLPEVEKNGVDMAEKFGM
ILELATPLRAVAIPV

Transcript Sequence

Transcript ID

Os03t0248200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7832016:7833726:-1 gene:Os03g0248200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 family protein, expressed. (Os03t0248200-01)
Sequence

GTGTACGCCGTGCGTTATTCTCCTTCTCTCCTCCCTGTACCTCCTCCGTCTCTTCGTCGA
CGCCCGCCGCAACCTGCCGCCGGGTCCCCGCCCGCAGCCGCTCATCGGCAACATCCTCGA
CCTCGGCTCCCAGCCGCACCGCTCCCTCGCGCGCCTCGCGGGGCGCTATGGCCCGCTCAT
GACGCTCCGCCTCGGCACCGTCACCACCGTCGTCGCCTCCTCCCCGGGCGCCGCCCGCGA
CATCCTCCAGCGCCACGACGCCGCCTTCTCCGCGCGCTCCGTGCCGGACGCCGCCCGCGC
GTGCGGGCACGACGGCTTCTCCATGGGCATGCTCCCGCCCAGCAGCGCCCTGTGGCGCGC
GCTCCGCAGGGTGTGCGCCGCGGAGCTCTTCGCGCCGCGCAGCCTCGACGCGCACCAGCG
CCTCCGCCGGGACAAGGTGCGCCAGCTCGTGTCCCACGTCGCGCGCCTGGCGCGCGACGG
CGCGGCCGTCGACGTCGGCCGCGCCGCGTTCACGGCTTCCCTGAACCTGCTCTCCAGCAC
CATCTTCTCCGCCGACCTCGCGGATTTCGGCGACGCCCGAGCTGAGTCGTCGGTGGGGGA
CTTAAGGGACTTGATCTCGGAGTTCACCATCGTCGTCGGGGTGCCGAACGTGTCGGACTT
CTTCCCGGCCGTCGCGCCGCTCGACCCGCAGCGGCTGCGGAGGCGGGTGGCGAGGGTGTT
CGAGCGGCTGCAGGCCGTGTTCGACGGGCACATCGAACGGCGCCTGCGGGACCGCGCTGC
CGGGGAGCCGCCCAAGAACGATTTCCTGGACGCTTTGCTCGACTACCGCAGCCCGGAGGA
TGGCCGGGGTTTTGATCGGCCAACGCTACAGTTTCTGTTTACGGATTTGTTTAGCGCGGG
AAGTGATACAAGCGCAGTAACTGTAGAATGGGCAATGGCTCAGCTGCTACAGAACCCACC
AGCAATGGCGAAAGCTCGTGAGGAGCTTGCTCGAGTGATTGGCTCCAAACAAGAAATTGA
GGAATCCGACATTAGCCAGCTCAAGTACCTCGAAGCCGTCGTGAAGGAGACATTACGGCT
TCATCCTCCGGCGCCATTTCTGCTTCCTCACCAAGCCGAAACGACCACACAGGTTGGTGG
CTACACGGTGCCCAAGGGCACCCGTGTTCTGGTGAATGTTTGGGCGATTGGTCGGGACAG
CAAGGTGTGGTCTGACCCTGACAAGTTCATGCCGGAGAGGTTCCTGCAGAGCGAGGTGGA
CCTGCGTGGCCGTGACTTCGAACTGATTCCATTTGGCTCTGGTCGAAGGATCTGTCCGGG
GTTGCCGCTGGCTGTTCGCATGGTGTACCTGATGCTCGCGTCGTTGCTGCACCGGTTTGA
GTGGAGGCTTCTACCGGAGGTCGAGAAGAACGGGGTGGACATGGCGGAGAAGTTCGGGAT
GATACTAGAGTTGGCTACGCCACTCCGGGCTGTTGCTATACCAGTTTAATAAGCTGATCA
TCACCATATGCTACCTTGCTACATACAATCCGTTATCTTTAGGAATGGAACACTTCACTG
GTAAATAAAATCATATACTAGT