Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0248000-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:7819901:7827315:-1 gene:Os03g0248000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9A description:Autophagy protein 9 domain containing protein. (Os03t0248000-02);Similar to Autophagy protein 9. (Os03t0248000-03)
Sequence	ATGATGTCCTTCCGTTCGAAGGACAGAAATGTGCAACCACGATTTAATTGGCCATGGAGA AGCGAATCACCATTATCAGCACAACTGCTCATTGATATTCCACCTGAAATAGAGTTATCG GACTACAGAAGGTTGCCAGGTTCAGGAAGCGAGAGCCCATCTGGACTTCTCCATGGTGAA GGCTTCAAGGACGAACCAATTGCTGACTTGGATATTTTCTTTGAAAGGCTTTATGAATAT TTCTGTGCAAAAGGGCTACGATGCATTGTTACCAAATGGATAATTGAGATGCTTAACGTA CTTTTTATGGTATGCTGTATTGGGTTCTTTTTCTTAATTGTTGATTGGAATGCCCTCGGC CATTTGAAATGTGGTGTAGAGGCACTCGAATCCGGGGAAAAACCATGTGATCTAATGCAA GTCGTTAAGCATAATCCATTAGTTCCATTCACATTTCCTAAAATGATCACTATTGGATCA ATGGTTATATTGACAACTTACGGTCTTATCAACTTCCTCAAGTTTTTCGTGCAACTCAGA AGTACATTGAATATTCGTGACTTCTACTGTAACAGTCTGAAAATTACAGATCTTGAGATC CAAACCATCTCATGGCCCAAAATAATTGAGAAGGTTGTCCTGCTACAGAAATCTCAGAAA CTTTGTGTTGTAAGGGACCTCTCGGAGCATGATATTATCATGAGAATAATGAGGAAAGAA AATTACTTGATTGGGATGGTCAATAAAGGCATTATCTCATTTCCAATTCGTCCTTGGGTA CCTGGAGCTGGACCAACTGTCAAATCCCATTTGCAAAACAGGAGAAACCATCTGATACTC CCGAAAGCCCTAGAATGGACATTAAATTGGTGCATCTTCCAAAGTATGTTTGATAGTAAA TTCTGTGTTCGGAAAGATTTTCTAACAAGCCCAGCTGTGTTAAAGAAGCGACTTGTATTT GTGGGCATTTCAATGCTTATCCTTTCACCCTGCCTTGTAATATTCCCATTAGTGTACCTC ATTCTGAGACATGCTGAAGAAATTTATAATCACCCCAGTACAGCTTCATCTAGAAGATGG TCAAACTTATCAAGGTGGATTTTTAGAGAGTATAATGAGGTAGATCATTTCTTCAGACAT AGGATGAACAACAGCGCTGTGCACTCTTTAAATTACCTGAAGCAATTTCCAACTCCACTG ATTTCTATAATGGCAAAATTCATATCTTTTGTTTCTGGTGGTTTGGCTGGTGCTCTTATA ATCATTGGATTTCTGGGTGAATCTGTTCTTGAGGGCCATATCTTTGGAAGAAATCTATTC TGGTATACTATTGTTTTTGGAACAATAGCTGCCATAAGTCGAAAAGTAGTGGCTGATGAA CTTCAAGTAATTGACCCAGAAGGCGCTATGTGCAATGTTGTCCAACAAACGCATTATATG CCTAAGAGGTGGCGTGGTAAAGAGGACAGTGAAGTGGTGCGAAGAGAATTCGAAACACTA TTTCAGTTTACCATAGTAATGCTGCTTGAAGAGATGGCCTCCATTTTCATCTCTCCTTAC TTGCTCATCTTTGAGGTACCAAAGCGTGTTGATGATATTCTGCGATTCATCTCAGACTTC ACGATTTATGTAGATGGGGTGGGAGATGTGTGCAGCCTAAGCTTGTTTGACTTCAGAAGA CATGGAAATAGAAACTATGCTTCACCATTTGATGCACTTAAAACGCTTAGGAGCTCCCAA GGGAAAATGGAGAAATCATTTTTAAGTTTTCAAAGTGTGTATCCATCATGGGAACCAAAT GCAGAAGGCAAACAATTCTTAACTAACCTCCAAAAGTTCAAGGAAAAGCAAATACGGCAG CAGGCTCTTGCACAATATCAAGCAATGGAAGCATCAGGCTTTGTGGCAAGCACCAGAGGT CACAGGGATGATATCTTCCACCAACTACTCCCTAGTGATATCCATAACCGTGCTGAGGCC ATCTCACCTGCTGTTTACAATTTGGGCCCGTTAGGATTGCTTGACACAGATCAAAGAAGT CATCCATATATTCTGGATTGGTACTACGTCTGCCATCCACCTCACTTGGATAGAACCGAG GCTCCTTATTTCAACGAAGTGTTCCCTGAGACCAGTGAGAACACAGGTTCAGCAGCATTT AAAGCATCTGAAATTGAAGAAGCAAGGGGCTGGGACTCTGATATGGTTCCCCCGCCTCGA GCAGATCGCGATGAGTGGAACTTTAACCATGAAAGGGTTCGAAGCCATATGGATGCATCG ACATCAAGCAATTTGTTTCATCATGCTCCAGTAGAACACCATGATACCAAAGGAAATATT ATCGATTGGTGGGATCAAGCACCTGAACATTCTACTGGTCAACAAGGAAGTTTTCTGGAG CCTCCGGAATTTGGAAATCGATATGTTGCTGGTAACCGTTCCAGTTATCACTCTGGTGAT GTGTCTGATGGAAGTGTGGAAGAGCTTGAGCGAAGCTATAACAGAAGTAGCAGCAGCTGG AGAAGACCTCAAGATTTGTCCACTACAAGGTATATGGACGACTCTGACATTGAGGAAGGG TTGAATCTTCCTTTTGCTGATCTCCCGCAGAAGGATGAAGATGCTCGACATGGCACATCT GATACTAATGACCCCACGCCAGTCGGCCTTCCTGTAAGAATAATTCCTAGAAGCAGTGAC CCTGTTTAG

Peptide Sequence

PEP ID	Os03t0248000-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:7819901:7827315:-1 gene:Os03g0248000 transcript:Os03t0248000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9A description:Autophagy protein 9 domain containing protein. (Os03t0248000-02);Similar to Autophagy protein 9. (Os03t0248000-03)
Sequence	MMSFRSKDRNVQPRFNWPWRSESPLSAQLLIDIPPEIELSDYRRLPGSGSESPSGLLHGE GFKDEPIADLDIFFERLYEYFCAKGLRCIVTKWIIEMLNVLFMVCCIGFFFLIVDWNALG HLKCGVEALESGEKPCDLMQVVKHNPLVPFTFPKMITIGSMVILTTYGLINFLKFFVQLR STLNIRDFYCNSLKITDLEIQTISWPKIIEKVVLLQKSQKLCVVRDLSEHDIIMRIMRKE NYLIGMVNKGIISFPIRPWVPGAGPTVKSHLQNRRNHLILPKALEWTLNWCIFQSMFDSK FCVRKDFLTSPAVLKKRLVFVGISMLILSPCLVIFPLVYLILRHAEEIYNHPSTASSRRW SNLSRWIFREYNEVDHFFRHRMNNSAVHSLNYLKQFPTPLISIMAKFISFVSGGLAGALI IIGFLGESVLEGHIFGRNLFWYTIVFGTIAAISRKVVADELQVIDPEGAMCNVVQQTHYM PKRWRGKEDSEVVRREFETLFQFTIVMLLEEMASIFISPYLLIFEVPKRVDDILRFISDF TIYVDGVGDVCSLSLFDFRRHGNRNYASPFDALKTLRSSQGKMEKSFLSFQSVYPSWEPN AEGKQFLTNLQKFKEKQIRQQALAQYQAMEASGFVASTRGHRDDIFHQLLPSDIHNRAEA ISPAVYNLGPLGLLDTDQRSHPYILDWYYVCHPPHLDRTEAPYFNEVFPETSENTGSAAF KASEIEEARGWDSDMVPPPRADRDEWNFNHERVRSHMDASTSSNLFHHAPVEHHDTKGNI IDWWDQAPEHSTGQQGSFLEPPEFGNRYVAGNRSSYHSGDVSDGSVEELERSYNRSSSSW RRPQDLSTTRYMDDSDIEEGLNLPFADLPQKDEDARHGTSDTNDPTPVGLPVRIIPRSSD PV

Transcript Sequence

Transcript ID	Os03t0248000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7819901:7827315:-1 gene:Os03g0248000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9A description:Autophagy protein 9 domain containing protein. (Os03t0248000-02);Similar to Autophagy protein 9. (Os03t0248000-03)
Sequence	ATTCTGTCCCCGATCCCGTCACGTCTCCTGGAAACACCCCACCCGCTTCTCGTCTCCTCG TCTCCTCGTTCGTCTCTCGCCTCGTCTTCCCCGTCCTCCGCGCGATTCCCCAACCCTCCC CGAAGCCGCAGTCCACCGCAAGTCGCCTGCCTCCTCCGCCCCGCGCCCCCTCCCCCCGTG CGCCGGCGATCGCCGGTGCCCGCCAGGTTATTTCTTGTGGCATGGCAAGGATACATATTG GTCTTGGCTTGTTCTTTCATGAATGATGTCCTTCCGTTCGAAGGACAGAAATGTGCAACC ACGATTTAATTGGCCATGGAGAAGCGAATCACCATTATCAGCACAACTGCTCATTGATAT TCCACCTGAAATAGAGTTATCGGACTACAGAAGGTTGCCAGGTTCAGGAAGCGAGAGCCC ATCTGGACTTCTCCATGGTGAAGGCTTCAAGGACGAACCAATTGCTGACTTGGATATTTT CTTTGAAAGGCTTTATGAATATTTCTGTGCAAAAGGGCTACGATGCATTGTTACCAAATG GATAATTGAGATGCTTAACGTACTTTTTATGGTATGCTGTATTGGGTTCTTTTTCTTAAT TGTTGATTGGAATGCCCTCGGCCATTTGAAATGTGGTGTAGAGGCACTCGAATCCGGGGA AAAACCATGTGATCTAATGCAAGTCGTTAAGCATAATCCATTAGTTCCATTCACATTTCC TAAAATGATCACTATTGGATCAATGGTTATATTGACAACTTACGGTCTTATCAACTTCCT CAAGTTTTTCGTGCAACTCAGAAGTACATTGAATATTCGTGACTTCTACTGTAACAGTCT GAAAATTACAGATCTTGAGATCCAAACCATCTCATGGCCCAAAATAATTGAGAAGGTTGT CCTGCTACAGAAATCTCAGAAACTTTGTGTTGTAAGGGACCTCTCGGAGCATGATATTAT CATGAGAATAATGAGGAAAGAAAATTACTTGATTGGGATGGTCAATAAAGGCATTATCTC ATTTCCAATTCGTCCTTGGGTACCTGGAGCTGGACCAACTGTCAAATCCCATTTGCAAAA CAGGAGAAACCATCTGATACTCCCGAAAGCCCTAGAATGGACATTAAATTGGTGCATCTT CCAAAGTATGTTTGATAGTAAATTCTGTGTTCGGAAAGATTTTCTAACAAGCCCAGCTGT GTTAAAGAAGCGACTTGTATTTGTGGGCATTTCAATGCTTATCCTTTCACCCTGCCTTGT AATATTCCCATTAGTGTACCTCATTCTGAGACATGCTGAAGAAATTTATAATCACCCCAG TACAGCTTCATCTAGAAGATGGTCAAACTTATCAAGGTGGATTTTTAGAGAGTATAATGA GGTAGATCATTTCTTCAGACATAGGATGAACAACAGCGCTGTGCACTCTTTAAATTACCT GAAGCAATTTCCAACTCCACTGATTTCTATAATGGCAAAATTCATATCTTTTGTTTCTGG TGGTTTGGCTGGTGCTCTTATAATCATTGGATTTCTGGGTGAATCTGTTCTTGAGGGCCA TATCTTTGGAAGAAATCTATTCTGGTATACTATTGTTTTTGGAACAATAGCTGCCATAAG TCGAAAAGTAGTGGCTGATGAACTTCAAGTAATTGACCCAGAAGGCGCTATGTGCAATGT TGTCCAACAAACGCATTATATGCCTAAGAGGTGGCGTGGTAAAGAGGACAGTGAAGTGGT GCGAAGAGAATTCGAAACACTATTTCAGTTTACCATAGTAATGCTGCTTGAAGAGATGGC CTCCATTTTCATCTCTCCTTACTTGCTCATCTTTGAGGTACCAAAGCGTGTTGATGATAT TCTGCGATTCATCTCAGACTTCACGATTTATGTAGATGGGGTGGGAGATGTGTGCAGCCT AAGCTTGTTTGACTTCAGAAGACATGGAAATAGAAACTATGCTTCACCATTTGATGCACT TAAAACGCTTAGGAGCTCCCAAGGGAAAATGGAGAAATCATTTTTAAGTTTTCAAAGTGT GTATCCATCATGGGAACCAAATGCAGAAGGCAAACAATTCTTAACTAACCTCCAAAAGTT CAAGGAAAAGCAAATACGGCAGCAGGCTCTTGCACAATATCAAGCAATGGAAGCATCAGG CTTTGTGGCAAGCACCAGAGGTCACAGGGATGATATCTTCCACCAACTACTCCCTAGTGA TATCCATAACCGTGCTGAGGCCATCTCACCTGCTGTTTACAATTTGGGCCCGTTAGGATT GCTTGACACAGATCAAAGAAGTCATCCATATATTCTGGATTGGTACTACGTCTGCCATCC ACCTCACTTGGATAGAACCGAGGCTCCTTATTTCAACGAAGTGTTCCCTGAGACCAGTGA GAACACAGGTTCAGCAGCATTTAAAGCATCTGAAATTGAAGAAGCAAGGGGCTGGGACTC TGATATGGTTCCCCCGCCTCGAGCAGATCGCGATGAGTGGAACTTTAACCATGAAAGGGT TCGAAGCCATATGGATGCATCGACATCAAGCAATTTGTTTCATCATGCTCCAGTAGAACA CCATGATACCAAAGGAAATATTATCGATTGGTGGGATCAAGCACCTGAACATTCTACTGG TCAACAAGGAAGTTTTCTGGAGCCTCCGGAATTTGGAAATCGATATGTTGCTGGTAACCG TTCCAGTTATCACTCTGGTGATGTGTCTGATGGAAGTGTGGAAGAGCTTGAGCGAAGCTA TAACAGAAGTAGCAGCAGCTGGAGAAGACCTCAAGATTTGTCCACTACAAGGTATATGGA CGACTCTGACATTGAGGAAGGGTTGAATCTTCCTTTTGCTGATCTCCCGCAGAAGGATGA AGATGCTCGACATGGCACATCTGATACTAATGACCCCACGCCAGTCGGCCTTCCTGTAAG AATAATTCCTAGAAGCAGTGACCCTGTTTAGACTGAAAAGCTCTCAGATACGTATGTTTG TGCATGGTTGTAAATATCTGTGTGAACCACGTCACAAACTTCACCAAAACTGGCAAACGC CGCAAATTCATTTGTACAGAACCACATATTACCTCACTGTATAGTCTTCTCCCTGCCCTC CTAGGGATTGTGGAGCAGGGGAAGAACCATTCTTTTGCAGCACGAAATGCATGGATCCAG TTGTTGCCTCGTTTC