Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0247100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7782444:7784795:1 gene:Os03g0247100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0247100-01)
Sequence	ATGCCGAAGAGGACCTCCTCGCATTCCCCCACCGTCTCCGCCATGAATCCCCTCCTCCCT TCCTCCTCCTTCCCCAAATTCCCCCACCCGGACCCAAACCTCAGCTCCCCAAACCCTAGC CCGTGTAGCTACCTCCTCCACGCCGACGCCGACGACGAGGCGCTGATCCAAATCCCGTGC CCGAACCCTAGCTCCGGCGCGGCCTCCTCCTCCTCCGTCGTCCTGCCGCCCATCGACCCG GCGCCGCACATCTCATCGCAGTTCTACACCTTCACCGCCGAGTCGCACGCGCTCATGCTG CGATGCGTCCTCGCCGGCCGCCCCGCGGCCGCCGACGAGGTCCGCTCCGCGACGCCCCCC TCCGTGCTCGCCTCGTGGCGGGCGGTGTGGAAGGACCGGAACGAGGACACGGCCTACCTC ACCGCTTGGAAGCGCATCCAGGACAAGCTCGGCGCGTCGGCCGACGGGCGGTCCCTCCAC TTCAAGTCCAACCCTGGGCAGCGCGTCTCGCACGTCGGCCAGTGGCGGGACATAGTCTCG GAGGCGCACGCCGACCCCGACCTGCTCCGCCATCTCGGGCTCAAGGACACCGTCGACCGA ATCAAGCAGTCATGGACCGTGGGTGCCAAATTCTACGGCATTCCGGAGTCATTCGTCCGT GTTTGTGTCTCTGCATGTGCTGTATGTAAGGCCGCACCTGCGGGACAGCCTGATTTTGCT ATGTCATCGCCAGGGCGGGGGAAACGGCGCCGCAGGTTTGAATATACGGAGACACTAGAT GTGCCCGCGCGAGATGTTCCACGCCGACTGCAACAGTTGGCTGCTAAGCATAAGGTGGTT CTCTGTATCAGGCAGAAGTATATAAGGCATAAACCATTCATGGCCGAGGTGAAAGATTAT GCATGCCACCGTGCTGGGGTGCCAACTTCAAGTGGTGTGAATGCTACGTCTTCTTCAGGA AGTGTCCCTGATGGGAAGAAGACACGAGTATTGAAGCGGGAACCATATCAATCAAAGAGG TGTGGTTGTGGGTTTCGTATTCGGGCAATTGTGCCAATAGCTAATTACAATGAGAAAGAC AAGAGTTTTGTATACGAGGAGGAGGGTACTGCAGTGTTCAAGCTTTATGCAGTGCATTCA GGGCATGAGCCAGGGCCACTTGATGGCAATGCCCGAATTGTTCATAGGTTAGTTGGGCAT AAGGGAGCTCTTGAGTTCGATCCAGACATTTATGGTGTCAGTGAGGAAGGAGATCCTAAC TTTACGATTAAGGGAGATTTTGATGTTGAAACTGATGATTCACATCTTGCAGTTTTGCAG CAAATTCGGGATCTCAAAACAGAGGTTGGCTTGTTAGAAGGGAAGGTGGGTAAGATGCAC CCAGAGCTTTTGGGTTCACTATCCAATGAGCTATCTGAGTGTTTGCACAGGATCAGGAAG TTTAATTTTGATGGCAATGTCTGCCAGCCAGAAGATACACTGATGATAGGCAACGAGGAG GTTCCTGGATGGGGGCCAGCTGACGTTTCTCACCATTTAGATCAGCATGACGGTGCATTC TGCAGGGATGATGAGATGCTTGATGATGACGATACTGATTTTGGTTCAAGTCTTGGGCCT ATTGTCTCGTGGGATGGAATGACGGCAGAATGTGAGGATAGGAAGATGCTCATGAGTGAT AGTCCAAAGTGTGACAAATGGATGCTCAAGGAAGACGTGGGCGACTTTGTTGAGAAGAGT ATTCTTAACTGTGGTGATGACGATGGTGTGGAGGATTCAAAAATTATCAAGCCATTGATG CATGATGAGACCATGGTAGCTGACCCAGGTTTGGTAGGTATTCATGTAGAAGGATTCTAC TCTGGAGCCAAATGGTATGATTCACCGGTAGGTTTGGATTCCAGTGGTGATGCAGATGTC AGTTTTAGACATGGTGGACTTGTGTGA

Peptide Sequence

PEP ID	Os03t0247100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7782444:7784795:1 gene:Os03g0247100 transcript:Os03t0247100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0247100-01)
Sequence	MPKRTSSHSPTVSAMNPLLPSSSFPKFPHPDPNLSSPNPSPCSYLLHADADDEALIQIPC PNPSSGAASSSSVVLPPIDPAPHISSQFYTFTAESHALMLRCVLAGRPAAADEVRSATPP SVLASWRAVWKDRNEDTAYLTAWKRIQDKLGASADGRSLHFKSNPGQRVSHVGQWRDIVS EAHADPDLLRHLGLKDTVDRIKQSWTVGAKFYGIPESFVRVCVSACAVCKAAPAGQPDFA MSSPGRGKRRRRFEYTETLDVPARDVPRRLQQLAAKHKVVLCIRQKYIRHKPFMAEVKDY ACHRAGVPTSSGVNATSSSGSVPDGKKTRVLKREPYQSKRCGCGFRIRAIVPIANYNEKD KSFVYEEEGTAVFKLYAVHSGHEPGPLDGNARIVHRLVGHKGALEFDPDIYGVSEEGDPN FTIKGDFDVETDDSHLAVLQQIRDLKTEVGLLEGKVGKMHPELLGSLSNELSECLHRIRK FNFDGNVCQPEDTLMIGNEEVPGWGPADVSHHLDQHDGAFCRDDEMLDDDDTDFGSSLGP IVSWDGMTAECEDRKMLMSDSPKCDKWMLKEDVGDFVEKSILNCGDDDGVEDSKIIKPLM HDETMVADPGLVGIHVEGFYSGAKWYDSPVGLDSSGDADVSFRHGGLV

Transcript Sequence

Transcript ID	Os03t0247100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7782444:7784795:1 gene:Os03g0247100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0247100-01)
Sequence	CTCTCCCTCCCCCAAAAATCCCCGAGATGCCGAAGAGGACCTCCTCGCATTCCCCCACCG TCTCCGCCATGAATCCCCTCCTCCCTTCCTCCTCCTTCCCCAAATTCCCCCACCCGGACC CAAACCTCAGCTCCCCAAACCCTAGCCCGTGTAGCTACCTCCTCCACGCCGACGCCGACG ACGAGGCGCTGATCCAAATCCCGTGCCCGAACCCTAGCTCCGGCGCGGCCTCCTCCTCCT CCGTCGTCCTGCCGCCCATCGACCCGGCGCCGCACATCTCATCGCAGTTCTACACCTTCA CCGCCGAGTCGCACGCGCTCATGCTGCGATGCGTCCTCGCCGGCCGCCCCGCGGCCGCCG ACGAGGTCCGCTCCGCGACGCCCCCCTCCGTGCTCGCCTCGTGGCGGGCGGTGTGGAAGG ACCGGAACGAGGACACGGCCTACCTCACCGCTTGGAAGCGCATCCAGGACAAGCTCGGCG CGTCGGCCGACGGGCGGTCCCTCCACTTCAAGTCCAACCCTGGGCAGCGCGTCTCGCACG TCGGCCAGTGGCGGGACATAGTCTCGGAGGCGCACGCCGACCCCGACCTGCTCCGCCATC TCGGGCTCAAGGACACCGTCGACCGAATCAAGCAGTCATGGACCGTGGGTGCCAAATTCT ACGGCATTCCGGAGTCATTCGTCCGTGTTTGTGTCTCTGCATGTGCTGTATGTAAGGCCG CACCTGCGGGACAGCCTGATTTTGCTATGTCATCGCCAGGGCGGGGGAAACGGCGCCGCA GGTTTGAATATACGGAGACACTAGATGTGCCCGCGCGAGATGTTCCACGCCGACTGCAAC AGTTGGCTGCTAAGCATAAGGTGGTTCTCTGTATCAGGCAGAAGTATATAAGGCATAAAC CATTCATGGCCGAGGTGAAAGATTATGCATGCCACCGTGCTGGGGTGCCAACTTCAAGTG GTGTGAATGCTACGTCTTCTTCAGGAAGTGTCCCTGATGGGAAGAAGACACGAGTATTGA AGCGGGAACCATATCAATCAAAGAGGTGTGGTTGTGGGTTTCGTATTCGGGCAATTGTGC CAATAGCTAATTACAATGAGAAAGACAAGAGTTTTGTATACGAGGAGGAGGGTACTGCAG TGTTCAAGCTTTATGCAGTGCATTCAGGGCATGAGCCAGGGCCACTTGATGGCAATGCCC GAATTGTTCATAGGTTAGTTGGGCATAAGGGAGCTCTTGAGTTCGATCCAGACATTTATG GTGTCAGTGAGGAAGGAGATCCTAACTTTACGATTAAGGGAGATTTTGATGTTGAAACTG ATGATTCACATCTTGCAGTTTTGCAGCAAATTCGGGATCTCAAAACAGAGGTTGGCTTGT TAGAAGGGAAGGTGGGTAAGATGCACCCAGAGCTTTTGGGTTCACTATCCAATGAGCTAT CTGAGTGTTTGCACAGGATCAGGAAGTTTAATTTTGATGGCAATGTCTGCCAGCCAGAAG ATACACTGATGATAGGCAACGAGGAGGTTCCTGGATGGGGGCCAGCTGACGTTTCTCACC ATTTAGATCAGCATGACGGTGCATTCTGCAGGGATGATGAGATGCTTGATGATGACGATA CTGATTTTGGTTCAAGTCTTGGGCCTATTGTCTCGTGGGATGGAATGACGGCAGAATGTG AGGATAGGAAGATGCTCATGAGTGATAGTCCAAAGTGTGACAAATGGATGCTCAAGGAAG ACGTGGGCGACTTTGTTGAGAAGAGTATTCTTAACTGTGGTGATGACGATGGTGTGGAGG ATTCAAAAATTATCAAGCCATTGATGCATGATGAGACCATGGTAGCTGACCCAGGTTTGG TAGGTATTCATGTAGAAGGATTCTACTCTGGAGCCAAATGGTATGATTCACCGGTAGGTT TGGATTCCAGTGGTGATGCAGATGTCAGTTTTAGACATGGTGGACTTGTGTGAGATGTGA TTGTCCCTGATACCAGGAACATCATGTAAATTCTGTATACAGGAGGACATCAGCTTGTAC CAATTTAATGTAGTATCTATAGGTAGAGCTTGAACCAAAGTGACCTGCCTGCCCTGATAT ATACATGCTGCATTTATCGACTCAACCTTTGTTTAACTTATGTATAGTCCCCGTGTGGGT TTCCATCTTGTTACAAGACAATATAACTTTGGTTCTGTTCTTGATTAGCTATTTAGTCAT AACTTAATGTTTTGTAGAACTCTCACCCTCCCTCTCTCTCTCTCACGTGCGTGTGGGCAC GAATGTGCATGTGCATTTTGTAAATTTAATGCAAGGTTTTGCACACAATAACATGCTGTC TCTTTACTTTGC