Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0247000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7773866:7779865:-1 gene:Os03g0247000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE T description:Clp, N-terminal domain containing protein. (Os03t0247000-01)
Sequence	ATGGCGACCGCCGCCCAGGCCGCCGCCGCGGCGTTCCTCTCCTTCCTCTCCTCCTCCCCG CCGCACCACACCGCGCCCTCATCCTCCGTCTCCTTCCTGGCAGCCCGTGTGCTGCCCGCC TCCCTCAGGGCCGCTGCCGCGGGGTCCCCAACTTCCGCCTCCCGCTCCCGGGGCCGAGGT GTCGCGGCCGTCGTCGCTCAGCTCCCCACCGCGAATCCAGAGGTGGCTTCTGGGGAGAAG AAGATCCGGTGGTCATCACGAGCGGTGAGGTCATTTGCAATGGCGGAGCTGGAGGCTCGG AAGATGAGGTACCCAACCACTGGCACTGAAGGACTCCTCATGGGCATCCTTGTCGAGGGA ACTAGTGATGCAGCAAAACTTTTGCGTGCTAATGGAATTACGCTGCTCAAAGTGCGCGAG GAGGCAGCAAATGTGCTTGGGAAATCAGAAATGTTCTACTTTAGTCCTATGCACCCACCA TTGACTGAAGCTGCACAACGAGCGCTTGATTGGGCTATCAATGAAAAACTGAAATCAGGT GAAGATGGAGAAGTAACCGCCAATCATCTGCTCCTGGGGATATGGTCAGATAAAGAGTCA GCTGGTCATAAAGTATTGGCTTCCCTTGGTTTTGATGATGAGAGAGCCAATTCACTGGCC AAAACGGCTGGTGAAGAGGCTGCTATGAGTCCTAGATAG

Peptide Sequence

PEP ID	Os03t0247000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7773866:7779865:-1 gene:Os03g0247000 transcript:Os03t0247000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE T description:Clp, N-terminal domain containing protein. (Os03t0247000-01)
Sequence	MATAAQAAAAAFLSFLSSSPPHHTAPSSSVSFLAARVLPASLRAAAAGSPTSASRSRGRG VAAVVAQLPTANPEVASGEKKIRWSSRAVRSFAMAELEARKMRYPTTGTEGLLMGILVEG TSDAAKLLRANGITLLKVREEAANVLGKSEMFYFSPMHPPLTEAAQRALDWAINEKLKSG EDGEVTANHLLLGIWSDKESAGHKVLASLGFDDERANSLAKTAGEEAAMSPR

Transcript Sequence

Transcript ID	Os03t0247000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7773866:7779865:-1 gene:Os03g0247000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE T description:Clp, N-terminal domain containing protein. (Os03t0247000-01)
Sequence	ATCGCTTCCCCTATCAACCCTCAGAACCCCTCCCCTCCCCCCCCCCCCCCCTCCCCCGAA AACCTCCGCCCGCCATGGCGACCGCCGCCCAGGCCGCCGCCGCGGCGTTCCTCTCCTTCC TCTCCTCCTCCCCGCCGCACCACACCGCGCCCTCATCCTCCGTCTCCTTCCTGGCAGCCC GTGTGCTGCCCGCCTCCCTCAGGGCCGCTGCCGCGGGGTCCCCAACTTCCGCCTCCCGCT CCCGGGGCCGAGGTGTCGCGGCCGTCGTCGCTCAGCTCCCCACCGCGAATCCAGAGGTGG CTTCTGGGGAGAAGAAGATCCGGTGGTCATCACGAGCGGTGAGGTCATTTGCAATGGCGG AGCTGGAGGCTCGGAAGATGAGGTACCCAACCACTGGCACTGAAGGACTCCTCATGGGCA TCCTTGTCGAGGGAACTAGTGATGCAGCAAAACTTTTGCGTGCTAATGGAATTACGCTGC TCAAAGTGCGCGAGGAGGCAGCAAATGTGCTTGGGAAATCAGAAATGTTCTACTTTAGTC CTATGCACCCACCATTGACTGAAGCTGCACAACGAGCGCTTGATTGGGCTATCAATGAAA AACTGAAATCAGGTGAAGATGGAGAAGTAACCGCCAATCATCTGCTCCTGGGGATATGGT CAGATAAAGAGTCAGCTGGTCATAAAGTATTGGCTTCCCTTGGTTTTGATGATGAGAGAG CCAATTCACTGGCCAAAACGGCTGGTGAAGAGGCTGCTATGAGTCCTAGATAGCAAAAGG AGCCTTATAGTTTACTACTGAACTTCCCTGTGATGCAATGTGCTTGCGTTTGGAACCTCA AGTAACTTCTTGGCGACTCCAGTATCATGGCCCACGCATTAAGTTAACTTGAAGAGATTG CTTCTACAAGTTTTAGGGCTTTATTAAGATTGTTAGACTGAATGCAATATGTCAGACTCC CCTATTGCCCATACCTGTAAAAGCAGTGCAATGTATTTTCAAAATGAGCATTTCTGTTGC TTGCTCAGCTGGATTGGTGCAATTCTATTAAAAGATCCTTTTGAAAGATAAAGATTTTGA ACGGGTTCAGAGC