Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0246900-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:7767062:7768701:-1 gene:Os03g0246900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 16. (Os03t0246900-00)
Sequence

ATGAGCTCGGGAGGCGGAGCCAGCAGCGCGCTCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGAGGAGGAGGAGGAGGGCCGAGCGGCGGCGGCGGTGGAGGAGGCGGGCCGTGCGGGGCG
TGCAAGTTCCTGCGGCGCAAGTGCGTGAGCGGGTGCATCTTCGCGCCCTACTTCGACTCG
GAGCAGGGCGCGGCGCACTTCGCGGCGGTGCACAAGGTGTTCGGCGCCAGCAACGTGTCC
AAGCTGCTCCTCCAGATCCCGGCGCACAAGCGCCCCGACGCCGTCGTCACCATCTGCTAC
GAGGCCCAGGCCCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCGCCCTC
CAGCAGCAGGTGGTGAATCTCCAGGCCGAGCTGACCTACTTGCAAGCCCACCTCGCCACG
CTGGAGCTGCCGTCCCCGCCGCCGCTGATGCCGGCGCCGCCGCAGATGCCGATGCCGGCG
CCGTTCTCCATCTCGGACCTCCCGTCGTCGACGAGCGTCCCGACCACCGTCGACCTCTCA
GCTCTCTTCGACCCGCCGCCGCAGCCGCAATGGGCATCGCCGCTCCAGCAGCAGCAGCAC
CACCACCACCAGCACCATCATCACCAACAGCAGCAGCACCAGCTCCGGCAGCCCTCATAT
GCCACGCTGGCCAGGGCGCCGTCCGGCATGACGGCGGCGGCGGAGAGCTCGGGAGGAGGA
GGAGGAGGCGGCGGTGGAGACCTTCAGGCGCTCGCAAGGGAGCTCCTGGATCGCCACAGG
TCCGCAGTGAAGCTCGAGCAGCCGCCGCCGCCGCACTCTAGATCATGA

Peptide Sequence

PEP ID

Os03t0246900-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:7767062:7768701:-1 gene:Os03g0246900 transcript:Os03t0246900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 16. (Os03t0246900-00)
Sequence

MSSGGGASSALGGGGGGGGSGGGGGGPSGGGGGGGGPCGACKFLRRKCVSGCIFAPYFDS
EQGAAHFAAVHKVFGASNVSKLLLQIPAHKRPDAVVTICYEAQARLRDPVYGCVAHIFAL
QQQVVNLQAELTYLQAHLATLELPSPPPLMPAPPQMPMPAPFSISDLPSSTSVPTTVDLS
ALFDPPPQPQWASPLQQQQHHHHQHHHHQQQQHQLRQPSYATLARAPSGMTAAAESSGGG
GGGGGGDLQALARELLDRHRSAVKLEQPPPPHSRS

Transcript Sequence

Transcript ID

Os03t0246900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7767062:7768701:-1 gene:Os03g0246900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 16. (Os03t0246900-00)
Sequence

ATGAGCTCGGGAGGCGGAGCCAGCAGCGCGCTCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGAGGAGGAGGAGGAGGGCCGAGCGGCGGCGGCGGTGGAGGAGGCGGGCCGTGCGGGGCG
TGCAAGTTCCTGCGGCGCAAGTGCGTGAGCGGGTGCATCTTCGCGCCCTACTTCGACTCG
GAGCAGGGCGCGGCGCACTTCGCGGCGGTGCACAAGGTGTTCGGCGCCAGCAACGTGTCC
AAGCTGCTCCTCCAGATCCCGGCGCACAAGCGCCCCGACGCCGTCGTCACCATCTGCTAC
GAGGCCCAGGCCCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCGCCCTC
CAGCAGCAGGTGGTGAATCTCCAGGCCGAGCTGACCTACTTGCAAGCCCACCTCGCCACG
CTGGAGCTGCCGTCCCCGCCGCCGCTGATGCCGGCGCCGCCGCAGATGCCGATGCCGGCG
CCGTTCTCCATCTCGGACCTCCCGTCGTCGACGAGCGTCCCGACCACCGTCGACCTCTCA
GCTCTCTTCGACCCGCCGCCGCAGCCGCAATGGGCATCGCCGCTCCAGCAGCAGCAGCAC
CACCACCACCAGCACCATCATCACCAACAGCAGCAGCACCAGCTCCGGCAGCCCTCATAT
GCCACGCTGGCCAGGGCGCCGTCCGGCATGACGGCGGCGGCGGAGAGCTCGGGAGGAGGA
GGAGGAGGCGGCGGTGGAGACCTTCAGGCGCTCGCAAGGGAGCTCCTGGATCGCCACAGG
TCCGCAGTGAAGCTCGAGCAGCCGCCGCCGCCGCACTCTAGATCATGA