Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0245700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:7686746:7688842:-1 gene:Os03g0245700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiolase-like, subgroup domain containing protein. (Os03t0245700-02);Similar to senescence-associated protein 15. (Os03t0245700-03)
Sequence	ATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCGACGAC GCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCCGCCTC CCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGC AGCGTCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCTACTCC TTCGTCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCTGGCTC GGGACCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGTACCTC GTCGAGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCTTCCTC GAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCAAGATC ACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGCGGCCG CCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGTGCCTC GACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCATCGTC AACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACTACGAG ATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCCTCATC GCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCGTCCTC AGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCCTTTCG AATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCGACGCC GGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGGACGCACAAGGGCGCCACCGACGAG TGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGCTGGCG CGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGGGGCCC CTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCCGCGTG TTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGCACTTC TGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCCTGGAG GACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCAGCAGC TCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCAACCGC GTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCGCGCTC CGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCTGGGTG GACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGA

Peptide Sequence

PEP ID	Os03t0245700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:7686746:7688842:-1 gene:Os03g0245700 transcript:Os03t0245700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiolase-like, subgroup domain containing protein. (Os03t0245700-02);Similar to senescence-associated protein 15. (Os03t0245700-03)
Sequence	MEAAVMERERLTAEMAFRDDARAAGGEWAPSIVIKIRRRLPDFARSVNLKYVKLGIRHGG SVTSYLPMLCVPLLASAAYSFVRLDVIYRSIDLLTCVAWLGTAVLLLTVYYFKRPRPVYL VEFACYKPDDQHKISKEGFLEMTESTGCFNDAALDFQTKITNRSALGDETYLPPGVQARP PRLNMAEARMEAEAVMFGCLDALFESTGINPKRDVGILIVNCSLFNPTPSLSSMIINHYE MRADVKSFNLGGMGCSAGLIAIDLAKDMLQANPNSYAVVLSTENITLNWYFGNDRSMLLS NCIFRMGGAAALLSNRRADAGRAKYRLLHTVRTHKGATDECFNCVYQREDEDGKVGVSLA RELMAVAGDALKTNITTLGPLVLPLTEQLKFLKSLMMRRVFRVKGVRPYIPDFRRAFEHF CVHAGGRAVLEEVQRSLSLEDRDMEPSKCSLHRFGNTSSSSLWYELAYAEAKGRVQRGNR VWQIGFGSGFKCNSAVWRALRDVPAVSPPPKGKKSCNPWVDCVAKYPPKAYV

Transcript Sequence

Transcript ID	Os03t0245700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7686746:7688842:-1 gene:Os03g0245700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiolase-like, subgroup domain containing protein. (Os03t0245700-02);Similar to senescence-associated protein 15. (Os03t0245700-03)
Sequence	ACGCGTCCCGCTCTAGTGCTTTAGCCTTTTCCATTCACGCCAAAGGCAACCTCGAGTTCA GCTCGGTACGTGTCGGGGAGAGTCAAGAGAAAGAGAAAGAGAGGGCTAGCTTAGCTGTGA GCTCCATGGAGGCGGCTGTCATGGAGCGGGAGCGGCTCACGGCGGAGATGGCGTTCCGCG ACGACGCGCGGGCGGCCGGGGGGGAGTGGGCGCCGAGCATCGTGATCAAGATCCGGCGCC GCCTCCCGGACTTCGCGCGGTCCGTGAACCTCAAGTACGTCAAGCTCGGGATCCGGCACG GCGGCAGCGTCACGTCGTACCTGCCCATGCTGTGCGTGCCGCTGCTCGCCTCCGCCGCCT ACTCCTTCGTCCGCCTCGACGTCATCTACCGCTCCATCGACCTGCTCACCTGCGTCGCCT GGCTCGGGACCGCCGTGCTGCTGCTCACCGTCTACTACTTCAAGCGCCCGCGCCCGGTGT ACCTCGTCGAGTTCGCCTGCTACAAGCCGGACGACCAGCACAAGATCTCCAAGGAAGGCT TCCTCGAGATGACCGAGAGCACCGGCTGCTTCAATGACGCCGCGCTCGACTTCCAGACCA AGATCACCAATCGCTCCGCGCTCGGCGACGAGACGTACCTCCCTCCCGGCGTCCAGGCGC GGCCGCCGAGGCTCAACATGGCCGAGGCGAGGATGGAGGCCGAGGCCGTCATGTTCGGGT GCCTCGACGCGCTCTTCGAGTCCACCGGGATCAACCCGAAACGCGACGTGGGCATCCTCA TCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCGTCGATGATCATCAACCACT ACGAGATGCGGGCGGACGTCAAGTCGTTCAACCTCGGCGGCATGGGGTGCAGCGCCGGCC TCATCGCCATCGACCTCGCCAAGGACATGCTCCAGGCGAACCCCAACTCGTACGCGGTCG TCCTCAGCACGGAGAACATCACCCTCAACTGGTACTTCGGTAACGACCGCTCGATGCTCC TTTCGAATTGCATCTTCCGTATGGGCGGCGCGGCGGCGCTGCTCTCGAACCGCCGCGCCG ACGCCGGCCGCGCCAAGTACCGGTTGCTGCACACCGTGCGGACGCACAAGGGCGCCACCG ACGAGTGCTTCAACTGCGTGTACCAGCGCGAGGACGAGGACGGGAAGGTCGGGGTGTCGC TGGCGCGGGAGCTCATGGCGGTGGCCGGCGACGCGCTCAAGACCAACATCACCACGCTGG GGCCCCTCGTCCTCCCGCTCACCGAGCAGCTCAAGTTCCTCAAGTCCCTGATGATGCGCC GCGTGTTCCGCGTCAAGGGCGTGCGCCCCTACATCCCGGACTTCCGCCGCGCGTTCGAGC ACTTCTGCGTGCACGCCGGCGGCCGCGCCGTGCTGGAGGAGGTGCAGCGCAGCCTCAGCC TGGAGGACAGGGACATGGAGCCGAGCAAGTGCTCGCTGCACCGGTTCGGCAACACCAGCA GCAGCTCGCTGTGGTACGAGCTGGCGTACGCCGAGGCCAAGGGCCGCGTCCAGCGCGGCA ACCGCGTGTGGCAGATCGGCTTCGGCTCGGGGTTCAAGTGCAACAGCGCGGTCTGGCGCG CGCTCCGCGACGTGCCGGCCGTGTCGCCGCCGCCGAAGGGGAAGAAGAGCTGCAACCCCT GGGTGGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTTTGACGGTTACGTTTTCGTG ACCTCGCACAAATTGTATGATTCATTTCTCCTCACCAAAACACACAAAAAAAAGAGGGCA TATGCTGGGGAAGACTTTTTTTTTTTGTCGTTTTTTCTTCTTCGCATAGGTTTGCTGTAG ACATTGCCGGTTATTGGAATTCAGGGATTTATACGGCGAATTGAATTCCAAAAGCTAGCA GTGCCATTCTTTTCAGTTTTTGTACTAGCAGCATTTGTTTTACACATCCTGGCCTTCTAG AAGTTGGGGGGAAACAGAATGGAGGACATCACAACATGCCATACTACATATGACTAGAGA ACAATATTGCCAAGTGTAAATTATAAACGAGAAATCAATGTTACACGTTGTTTGTGT