Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0243300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7579448:7583738:-1 gene:Os03g0243300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subunit 5 a, 26S proteasome subunit 5a, 19S regulatory particle non-ATPase subunit 10, RP non-ATPase 10, Regulatory Particle Non-ATPase 10 description:Similar to 26S proteasome non-ATPase regulatory subunit 4 (26S proteasome regulatory subunit S5A) (Multiubiquitin chain binding protein). (Os03t0243300-01)
Sequence	ATGGTGCTCGAGGCGACGATGATCTGCATAGACAACTCGGAGTGGATGCGGAACGGCGAC TACTCGCCGTCGCGATTCCAGGCTCAGGCCGACGCCGTCAACCTCATCTGTGGCGCCAAG ACCCAGTCCAACCCGGAGAACACGGTGGGCGTCATGACGATGGCCGGAAAGGGCGTGCGC GTGCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGGACTTGAA GTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGCTCTGAAGCAT CGCCAGAATAAGAGGCAGCAACAGCGGATTATAGCTTTTATTGGAAGCCCTGTGAAATAC GACAAGAAAGTTTTGGAAACAATCGGGAAAAAGCTGAAGAAGAATAATGTGGCTCTTGAC ATCGTTGACTTTGGTGAAACCGATGATGATAAGCCTGAGAAACTGGAAGCGCTAATCTCT GCTGTGAACAGTAGTGATAGCAGCCACATCGTTCATGTCCCTCCCGGTGAAAATGCCCTT TCCGATGTGCTTATAAGTACTCCTATCTTCACTGGTGAAGAAGGTGGAAGCGGTTTTGCT GCTTCTGCAGCAGCAGCAGCAGCTACTGGTGCAGCTGGATTTGAATTTGATGTGGACCCA AATGTAGATCCAGAATTGGCACTCGCCCTGCGGTTGTCCATGGAAGAAGAGCGAGCAAGG CAAGAGGCTATTGCGAAGAAGGCCGCAGAAGAATCTTCTGGTGCTGAAAATAAGGACCAT GCCTCAAGCTCAAACGCTGATTCTGTTATGGCAGAAGCGGAACCTGCCTCAAATGCTGCT GATGATAAAAAAGATCAGCCGAAGGAAGATGATGATGCTCAGCTACTACAACAGGCTCTT GCAATGTCAATGGAGGAGGGTTCTTCAGGGGCTGCAGCGGCTGATGCTGCTATGGCAGAG GCTGCTGTAGATGACCAGGACTTGGCACTAGCTCTTCAAATGTCTGTCCAGGACGCAGGC GGGTCTAGTCAGTCTGATATGAGCAAGGTGTTTGAAGACAGATCATTTGTTACATCCATC CTTAACTCTCTCCCTGGTGTTGACCCCAATGACCCCTCTGTGAAAGATTTGCTGGCATCA TTGCATGGGCAGGGCGAGCAAGAGAAGAAGGAAGACAAATCAGACAAGCCAGAAGATGAG AAGAAATAA

Peptide Sequence

PEP ID	Os03t0243300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7579448:7583738:-1 gene:Os03g0243300 transcript:Os03t0243300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subunit 5 a, 26S proteasome subunit 5a, 19S regulatory particle non-ATPase subunit 10, RP non-ATPase 10, Regulatory Particle Non-ATPase 10 description:Similar to 26S proteasome non-ATPase regulatory subunit 4 (26S proteasome regulatory subunit S5A) (Multiubiquitin chain binding protein). (Os03t0243300-01)
Sequence	MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL SDVLISTPIFTGEEGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERAR QEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNAADDKKDQPKEDDDAQLLQQAL AMSMEEGSSGAAAADAAMAEAAVDDQDLALALQMSVQDAGGSSQSDMSKVFEDRSFVTSI LNSLPGVDPNDPSVKDLLASLHGQGEQEKKEDKSDKPEDEKK

Transcript Sequence

Transcript ID	Os03t0243300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7579448:7583738:-1 gene:Os03g0243300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subunit 5 a, 26S proteasome subunit 5a, 19S regulatory particle non-ATPase subunit 10, RP non-ATPase 10, Regulatory Particle Non-ATPase 10 description:Similar to 26S proteasome non-ATPase regulatory subunit 4 (26S proteasome regulatory subunit S5A) (Multiubiquitin chain binding protein). (Os03t0243300-01)
Sequence	CCCGTATCATCTTGCTCCCCAAACCAAGCCAACCCCCTCGACGGCCGGAACACATCGGGG GGACGCAGCCATGGTGCTCGAGGCGACGATGATCTGCATAGACAACTCGGAGTGGATGCG GAACGGCGACTACTCGCCGTCGCGATTCCAGGCTCAGGCCGACGCCGTCAACCTCATCTG TGGCGCCAAGACCCAGTCCAACCCGGAGAACACGGTGGGCGTCATGACGATGGCCGGAAA GGGCGTGCGCGTGCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCA CGGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGC TCTGAAGCATCGCCAGAATAAGAGGCAGCAACAGCGGATTATAGCTTTTATTGGAAGCCC TGTGAAATACGACAAGAAAGTTTTGGAAACAATCGGGAAAAAGCTGAAGAAGAATAATGT GGCTCTTGACATCGTTGACTTTGGTGAAACCGATGATGATAAGCCTGAGAAACTGGAAGC GCTAATCTCTGCTGTGAACAGTAGTGATAGCAGCCACATCGTTCATGTCCCTCCCGGTGA AAATGCCCTTTCCGATGTGCTTATAAGTACTCCTATCTTCACTGGTGAAGAAGGTGGAAG CGGTTTTGCTGCTTCTGCAGCAGCAGCAGCAGCTACTGGTGCAGCTGGATTTGAATTTGA TGTGGACCCAAATGTAGATCCAGAATTGGCACTCGCCCTGCGGTTGTCCATGGAAGAAGA GCGAGCAAGGCAAGAGGCTATTGCGAAGAAGGCCGCAGAAGAATCTTCTGGTGCTGAAAA TAAGGACCATGCCTCAAGCTCAAACGCTGATTCTGTTATGGCAGAAGCGGAACCTGCCTC AAATGCTGCTGATGATAAAAAAGATCAGCCGAAGGAAGATGATGATGCTCAGCTACTACA ACAGGCTCTTGCAATGTCAATGGAGGAGGGTTCTTCAGGGGCTGCAGCGGCTGATGCTGC TATGGCAGAGGCTGCTGTAGATGACCAGGACTTGGCACTAGCTCTTCAAATGTCTGTCCA GGACGCAGGCGGGTCTAGTCAGTCTGATATGAGCAAGGTGTTTGAAGACAGATCATTTGT TACATCCATCCTTAACTCTCTCCCTGGTGTTGACCCCAATGACCCCTCTGTGAAAGATTT GCTGGCATCATTGCATGGGCAGGGCGAGCAAGAGAAGAAGGAAGACAAATCAGACAAGCC AGAAGATGAGAAGAAATAAATCAACTCCTTTGTGTCTTCCTTGTAAGATTTCAGTATGCT GTCTTACCTCCATATCCGATATGCATGTTTTGCATATAGTCTATTCAGCCCTTGATGACT ATCGTTCTGGTTGTACGATATCTTCTACTATAAACTAGAAGCTGGCGAGTTGGCTGCATA AATTTGAATTTTGGAGCAGCAAGTTATGTCCTCAAGATACTTGCATGTAAAACTGGTCTA TGTGTGCAGAGGTTCTGTCGCTCTGCTCTTTTTAGGACTGTCGTTTCATTGTTCACAATT ATGATTAGCATATTACTGTTTCTATGCAAAACTAACGTGTTAACGTGTGCAATTTGCATC AAAGTTTACCATTTACCCCACGCAACTTATCAAAACGTTGCGCGACCTCGCAGGCAACCA CCTCTTGATCAATCTCGCAGGCGCCCGAAGCATTGGAGATATCTGGTCTCGCTTTATTTG GTCATGGATTCTACTTATCCTCGTGTAACTGTACTTCAATTAAAAAACTTAAAGGGATAA TGGTTTATCACTTCTTCTGTCGTCATTTTACGATTTGCAATTGTTTACTGTCGTGGAATT TACTTATTCGCTTCTATATAATTCGTCTTCTTTCCCGC