Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0243100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7565328:7567774:-1 gene:Os03g0243100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 5 description:Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5). (Os03t0243100-01)
Sequence

ATGGCAATGGCTTACAAGATGGCGACGGAGGGGATGAACGTGAAGGAGGAGTGCCAGAGG
TGGTTCATGGAGATGAAGTGGAAGAAGGTGCACCGGTTCGTGGTGTACAAGATCGACGAG
CGGTCGCGCGCCGTGCTGGTGGACAAGGTGGGCGGCCCCGGCGAAGGGTACGAGGAGCTC
GTCGCCGCGCTGCCCACCGACGACTGCCGCTACGCCGTCTTCGACTTCGACTTCGTCACC
GTCGACAACTGCCAGAAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCGAGG
ATAAGAGCCAAGATTCTGTACGCGACGTCGAAGCAAGGGCTGAGGCGGGTGCTTGACGGG
GTCCACTACGAGGTGCAAGCCACGGACTCCTCCGAGATGGGCTACGACGTCATCCGAGGC
CGCGCTCAGTGA

Peptide Sequence

PEP ID

Os03t0243100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7565328:7567774:-1 gene:Os03g0243100 transcript:Os03t0243100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 5 description:Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5). (Os03t0243100-01)
Sequence

MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL
VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG
VHYEVQATDSSEMGYDVIRGRAQ

Transcript Sequence

Transcript ID

Os03t0243100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7565328:7567774:-1 gene:Os03g0243100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 5 description:Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5). (Os03t0243100-01)
Sequence

AAAAGAAACCAACGGCAGGAGGAGGGAGACACCTCGAGGAAACCACAGCACCCAAAGAAC
AAGAAAGGCGATACCCCTTCTCCCACCACCACCGTTTCCGTCCATCTCCATCCTCACCGC
CGGCGACGCTCACCTCCGACGACCGATCGGCGACCTGCTTCAGCCATGGCAATGGCTTAC
AAGATGGCGACGGAGGGGATGAACGTGAAGGAGGAGTGCCAGAGGTGGTTCATGGAGATG
AAGTGGAAGAAGGTGCACCGGTTCGTGGTGTACAAGATCGACGAGCGGTCGCGCGCCGTG
CTGGTGGACAAGGTGGGCGGCCCCGGCGAAGGGTACGAGGAGCTCGTCGCCGCGCTGCCC
ACCGACGACTGCCGCTACGCCGTCTTCGACTTCGACTTCGTCACCGTCGACAACTGCCAG
AAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCGAGGATAAGAGCCAAGATT
CTGTACGCGACGTCGAAGCAAGGGCTGAGGCGGGTGCTTGACGGGGTCCACTACGAGGTG
CAAGCCACGGACTCCTCCGAGATGGGCTACGACGTCATCCGAGGCCGCGCTCAGTGAGCT
GAGCTCCTCCGGCGCCGGCGCGCCGCCGCGACGCGACGAGTCGCGGGCGGGCTTGCGGCG
CTGTACTTAGCACGTACTCACCCCCAGTGTGTGTGGTATAATCGGACGGATGCTAATTGG
CTCTCTCGTTCTCGTAGTAGGGCGGCTGATGATGCGATCTGACGAGGGTTTGTGAATTTG
GTTTAGAGTTTGGCGTGGCGTGGCGTGCTGTTTCGTTTGGAGAGTTGGAGGGGTGTGTGT
AGCGTGGCGTGTTGCTGAGGGAGTGGCAGCGGATTAGTGAAACGTCCCATGTCGGTGACG
TAGAAATTCCACTGATGATGCTCCACTTGGTTGATTAATTGTTCCAGGAAACATGATCGG
GGTGCTTCAAAATTTTGTTCGCCTGCTGGAATAAAAGGACACTTGACACTT