Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0241800-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:7497368:7499362:-1 gene:Os03g0241800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0241800-00)
Sequence

ATGAACCCGCCGCGGAGCCTCTTCCCGGAGCTGCCTCCGGCCGGCCACGCCCTCCTCCGC
CTCGTGGACTCGTGCCGCGCGCCCGCCCACCTCCGCTCCCTGCGCGCCGCGCACGCGCGC
CTCCTCTTCCTCCTGCGCCTCCCCTCCCACCCGGCCTCCGCCGCCGTCCGCGTCAAGCTC
ATCCAGGCCTACGCCGCGTGCGCCGCGCTCCCGGCCGCCCGCGCGGTGCTCGACGCCTCC
CCCGACCGCACCACCGTCTTCTTCAACGTCCTCCTCCGGGGCCTCACCGCCGCTTCCCTC
CACCGCGACGCGCTGCTCCTCTTCGCCTCCATGAGGCCGCAGGGCCACGCCTGCTTCCCC
GACCACTACACCTACCCGCTCGCTCTCAAGTCCTGCGCAGCCACGGACGGGCTCGTTCTC
GGGCGACAGATCCATTCCTCCACCGCGAGGCTTGGCCTGGACGGGAACGTCTTCGTGGCG
CATTCGGCGATCAGCATGTATGCGCGGTGCGGCCGCCCGGACGACGCGTATCAGATGTTC
GAAGAAATGCAGTACCGGGATGTTGTTTCTTGGAACGCCATGATTTCTGGGTTCGCACAC
GCGGGTTTGTTTGGCCGCGCTATGGATGTTTTCAGGGAATTGGTAGCGTTGCAGTGCCCA
AAGCCCGATGCCGGAACCATGGCAAGCATCTTGCCCTCTATGGGGAAGGCAAGGGTAGAG
GATATTGCATTATTGAAGGGAGTGTTTGATGAGATGAGGTTTAAAGGGCTTATTTCCTGG
AATGCTATGCTTGCTGTATATACTAACAATGAAATGCATGTTGAGGCTGTTGAGCTGTTC
ATGAGGATGCAAAAGGATGGCATTGAACCAGATGCAGTGACTCTGGCGACTGTTCTTCCT
TCTTGTGGAGAAGTATCGGCCCTTTCACTGGGAAAACGGATCCATGAAGTTATCAAGAGA
AGAAGGATGTGCTCCAGTATGTTGCTTGAGAATGCCCTCATGGATATGTACGCAAATTGT
GGATGTCTGAAGGAAGCTAGGGATGTTTTTGATTCCATGGGCACGCGGGATGTGGTATCA
TGGACTTCAATAATTTCAGCTTATGGCAGGCATGGCCATGGTAGAGAGGCCATTGACTTG
TTTGAGAAGATGTGTGGACAGGGTCTGGAACCAGACTCTATTGCCTTTGTTGCTATTCTT
GCAGCATGTAGCCATGCTGGTCTTTTGGATATGGGAAAACATTACTTTTATTCCATGACT
AGTGAATTTCATATAGCCCCAAAGTTAGAGCATTATGCTTGCATGGTGGACCTTCTCGGG
CGTGCTGGATGCATAAGAGAGGCATATGATTTCATCATGGTGATGCCTATTAAGCCAAAT
GAAAGAGTTTGGGGAGCCTTGTTAGGAGCTTGTCGGATTCACTCCAATATGGACATTGGG
TTATTGGCAGCAGACAGTCTGTTAAGATTGGCACCTAAACAAACAGGATACTACGTGCTA
TTATCAAATATTTATGCTAGGGCTGGGAGATGGGCAGATGTTAGCATGGTGAGAAGTGTC
ATGGAAAGCAAGGGTATCAAGAAGTTGCCTGGTGTTAGCAATGCTGAGCTAGGGGATAGG
GTTCACACATTTCATATTGGTGATACATCTCATCCACAATCGAAAATGATTTACAAGAAA
TTAAGTGAATTGTTACGAAGGATCAGGGAAATGGGTTATAACCCAGAGGTTGAGGCTACA
CTTCATGATGTTGAAGAGGAAGACAAGGAGGGTCATCTTTCAGTACACAGTGAAAAATTG
GCTATTGCATTTCTTCTTATAAACACTAATCCAGGAACACCTATTAGGATAACAATGAAT
CTAAGAACATGTAGTGATTGCCATCATGCTGCTAAGTTGATTTCAACAATTGCCGGTCGA
GAGATTATACTTAAAGACGTTAATAGGATCCACTATATGGTACAAGGAGTTTGCTCATGT
GGGGACTATTGGTAA

Peptide Sequence

PEP ID

Os03t0241800-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:7497368:7499362:-1 gene:Os03g0241800 transcript:Os03t0241800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0241800-00)
Sequence

MNPPRSLFPELPPAGHALLRLVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVKL
IQAYAACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFP
DHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMF
EEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVE
DIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLP
SCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVS
WTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMT
SEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIG
LLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDR
VHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKL
AIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMVQGVCSC
GDYW

Transcript Sequence

Transcript ID

Os03t0241800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7497368:7499362:-1 gene:Os03g0241800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0241800-00)
Sequence

ATGAACCCGCCGCGGAGCCTCTTCCCGGAGCTGCCTCCGGCCGGCCACGCCCTCCTCCGC
CTCGTGGACTCGTGCCGCGCGCCCGCCCACCTCCGCTCCCTGCGCGCCGCGCACGCGCGC
CTCCTCTTCCTCCTGCGCCTCCCCTCCCACCCGGCCTCCGCCGCCGTCCGCGTCAAGCTC
ATCCAGGCCTACGCCGCGTGCGCCGCGCTCCCGGCCGCCCGCGCGGTGCTCGACGCCTCC
CCCGACCGCACCACCGTCTTCTTCAACGTCCTCCTCCGGGGCCTCACCGCCGCTTCCCTC
CACCGCGACGCGCTGCTCCTCTTCGCCTCCATGAGGCCGCAGGGCCACGCCTGCTTCCCC
GACCACTACACCTACCCGCTCGCTCTCAAGTCCTGCGCAGCCACGGACGGGCTCGTTCTC
GGGCGACAGATCCATTCCTCCACCGCGAGGCTTGGCCTGGACGGGAACGTCTTCGTGGCG
CATTCGGCGATCAGCATGTATGCGCGGTGCGGCCGCCCGGACGACGCGTATCAGATGTTC
GAAGAAATGCAGTACCGGGATGTTGTTTCTTGGAACGCCATGATTTCTGGGTTCGCACAC
GCGGGTTTGTTTGGCCGCGCTATGGATGTTTTCAGGGAATTGGTAGCGTTGCAGTGCCCA
AAGCCCGATGCCGGAACCATGGCAAGCATCTTGCCCTCTATGGGGAAGGCAAGGGTAGAG
GATATTGCATTATTGAAGGGAGTGTTTGATGAGATGAGGTTTAAAGGGCTTATTTCCTGG
AATGCTATGCTTGCTGTATATACTAACAATGAAATGCATGTTGAGGCTGTTGAGCTGTTC
ATGAGGATGCAAAAGGATGGCATTGAACCAGATGCAGTGACTCTGGCGACTGTTCTTCCT
TCTTGTGGAGAAGTATCGGCCCTTTCACTGGGAAAACGGATCCATGAAGTTATCAAGAGA
AGAAGGATGTGCTCCAGTATGTTGCTTGAGAATGCCCTCATGGATATGTACGCAAATTGT
GGATGTCTGAAGGAAGCTAGGGATGTTTTTGATTCCATGGGCACGCGGGATGTGGTATCA
TGGACTTCAATAATTTCAGCTTATGGCAGGCATGGCCATGGTAGAGAGGCCATTGACTTG
TTTGAGAAGATGTGTGGACAGGGTCTGGAACCAGACTCTATTGCCTTTGTTGCTATTCTT
GCAGCATGTAGCCATGCTGGTCTTTTGGATATGGGAAAACATTACTTTTATTCCATGACT
AGTGAATTTCATATAGCCCCAAAGTTAGAGCATTATGCTTGCATGGTGGACCTTCTCGGG
CGTGCTGGATGCATAAGAGAGGCATATGATTTCATCATGGTGATGCCTATTAAGCCAAAT
GAAAGAGTTTGGGGAGCCTTGTTAGGAGCTTGTCGGATTCACTCCAATATGGACATTGGG
TTATTGGCAGCAGACAGTCTGTTAAGATTGGCACCTAAACAAACAGGATACTACGTGCTA
TTATCAAATATTTATGCTAGGGCTGGGAGATGGGCAGATGTTAGCATGGTGAGAAGTGTC
ATGGAAAGCAAGGGTATCAAGAAGTTGCCTGGTGTTAGCAATGCTGAGCTAGGGGATAGG
GTTCACACATTTCATATTGGTGATACATCTCATCCACAATCGAAAATGATTTACAAGAAA
TTAAGTGAATTGTTACGAAGGATCAGGGAAATGGGTTATAACCCAGAGGTTGAGGCTACA
CTTCATGATGTTGAAGAGGAAGACAAGGAGGGTCATCTTTCAGTACACAGTGAAAAATTG
GCTATTGCATTTCTTCTTATAAACACTAATCCAGGAACACCTATTAGGATAACAATGAAT
CTAAGAACATGTAGTGATTGCCATCATGCTGCTAAGTTGATTTCAACAATTGCCGGTCGA
GAGATTATACTTAAAGACGTTAATAGGATCCACTATATGGTACAAGGAGTTTGCTCATGT
GGGGACTATTGGTAA