Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0241200-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:7476238:7478159:1 gene:Os03g0241200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27). (Os03t0241200-00)
Sequence	ATGAGCCAGGAGGTCGTGAACCCTAAGGCCTACCCGCTGGCGGACGCGCAGCTGACGATG ACCATCCTCGACCTCGTCCAGCAGGCCTCCAATTACAAGCAGCTCAAGAAGGGGGCCAAC GAAGCGACGAAGACCCTGAACAGGGGTATATCAGAGTTCGTGGTGATGGCGGCCGACACG GAGCCGCTCGAGATCCTTCTCCACCTCCCCCTGCTCGCGGAGGATAAGAACGTTCCATAT GTTTTTGTCCCTTCGAAGCAAGCCCTTGGCCGCGCATGTGGCGTTACTAGACCTGTCATT GCTTGTTCAGTGACCAGCAACGAGGGCAGTCAGCTGAAGACACCGATACAGAATCTCAAG GATGCTATCGAGAAGCTCCTCATTTGA

Peptide Sequence

PEP ID	Os03t0241200-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:7476238:7478159:1 gene:Os03g0241200 transcript:Os03t0241200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27). (Os03t0241200-00)
Sequence	MSQEVVNPKAYPLADAQLTMTILDLVQQASNYKQLKKGANEATKTLNRGISEFVVMAADT EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKTPIQNLK DAIEKLLI

Transcript Sequence

Transcript ID	Os03t0241200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7476238:7478159:1 gene:Os03g0241200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27). (Os03t0241200-00)
Sequence	GCCCAACGGGCTATATGAGGAGACGCTCGCGATAAACCCTAGCTCCACGCAGACACGAAA GCCCTAGCGACACGCGAGCTCCCCCAATCCTCCGCCGCGGCGGCCGCCTCCTCCTCCTCC TCCTCGCGCGAGCTCCTCCAAGCCGAGCCAACCCACCTCGCGAAAATGAGCCAGGAGGTC GTGAACCCTAAGGCCTACCCGCTGGCGGACGCGCAGCTGACGATGACCATCCTCGACCTC GTCCAGCAGGCCTCCAATTACAAGCAGCTCAAGAAGGGGGCCAACGAAGCGACGAAGACC CTGAACAGGGGTATATCAGAGTTCGTGGTGATGGCGGCCGACACGGAGCCGCTCGAGATC CTTCTCCACCTCCCCCTGCTCGCGGAGGATAAGAACGTTCCATATGTTTTTGTCCCTTCG AAGCAAGCCCTTGGCCGCGCATGTGGCGTTACTAGACCTGTCATTGCTTGTTCAGTGACC AGCAACGAGGGCAGTCAGCTGAAGACACCGATACAGAATCTCAAGGATGCTATCGAGAAG CTCCTCATTTGATTTACCAAGACCTTTCAGTGTGATGGGCCTCAGAGCGACACAGTTTTT CAGAGGCTTGGACTGGTGATGGTGTCTTATTTGCTAGAATTTTGTGTTTTTCAACTATGT CTGCGAGAACATTAAACCTATACATGCGATGTGCCATGTGTCCTATCTTTGTGACTGTTG TGTAATCCTTAAGATACATCTGTAGCATGGCAGTTCAGTTTTCTCCCTAGTCACTCCAAG CACTATTGTAATGACTAATGATTTATGGATGTTTGCTTGTGACACACTTGCG