Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0241100-03
CDS Infomation	cds chromosome:IRGSP-1.0:3:7469781:7475442:1 gene:Os03g0241100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb, DNA-binding domain containing protein. (Os03t0241100-01);Hypothetical conserved gene. (Os03t0241100-02);Myb, DNA-binding domain containing protein. (Os03t0241100-03)
Sequence	ATGTCCCTCGTTAGATCCGCCCCTGCCCGGCAATGGGCAGCATGGACACGCCAAGAGGAA CAAAATTTTTTCAATGCGCTGCGCCAAGTAGGGAAGAATTTTGAGAAGATTACGCTGCGT GTCCAGAGCAAAAGCAAAGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATG AAGAAACTTCTCGGTCCTGAGTTCTCGCTCGATGCAAAAAATTCCAAGGACACCATTGCT GCTATGCTCTGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCAT CTGAAGCCTCGGAGATTCAAAACTTTCGTAGAAGCATTGGGAAATCAACTACTAAAGGAT AGAAATAAAACCAGAAAAAAGTGTCCACGTGGGGATGTGTGCCTGTCCTCTTCATCTTCG GCTGTCAACAGGACTCCTGGAAATGAATCTTTCTCAGTAAAACTCTTGGCTGTGGATGTC TCCAATGGTAGCAAAGTAGGATCTTCTAAAGGGTCATTTTTCAAAAAGGTCACAGAACCA AATTGCAGTAACAAGTCAGGTGCAACTAAAGGGGACCTCTCCGCCACAAGAACTGTGAAA CAGAAAAGAAGAGCAGGTGGTGTTGTTGCATCTGCTGCATATAAAAAATGGGAGAGAGCT GCCATGGCTGGTGTTTCTTTGGTTGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTG AACGCTGATGCAAGAATGTTATCTCCATCATCAAGCAATGCCTGCACAGTTGATGGTCTT GGCACAAATCATATAAAGGAAGCAGATCAACAAGCACCTGCAAAGCTAAAGTTGCAGCTA TTTCCAATAAATGAAGCTACACGAAAGGCATTAGAGAAGGATGAACATAATCCACATCTG GAACTCACATTAAGTGCTAGGAAAAAAATATCATCAGTACTAGAACATTTGAACCGCAAG TGGGGCAACTCAAACATTGCATCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCATCAA GAAGATTTAGCTACATATCAGAGGTGGACCACAAAAGATACTGTCGCAGTGGCTGACGTT TTCCTTTCTGTGAATAGCCCATCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCT GAGCTTGAAGCAGGCGTAAGTGAAATATCTTTGACTCATTTTGAGAATTGCTTGATACCT GAAGACATCCATGCCAAATCTCCCTTAGAGGCTTGTGTGCAAAAGGATGGTAATTCGCTC AGTAGTTGTGCTCCTGAGCAACACCCTTGTGGTTCGAAAGATCAGTCAGCATTATTGTTT GCTATGCCATCTAGTACAGGCAAGAGTGCTCAGGTGCCAGAGCAGTGCATTGATGTTCTC CCCTCACAGTTTGGCAGGCAGAATCAAGACCAAGTTACCACGAACCAAGTTTTTGAGGTT GATCAAGGGATGGATTGTGCTGCAGTATCTGAAGGAGAGTGGGCAGATACCCTTACTGAT ATCAGTGTTGGATACTTACTGACAGAAGCTTCCAGAGGTGCTAATACTGATTGTCCAGGG ACATCTGTTGTCAAAAACACACTGTTGCTTGAGAATCCCTGCAGCTATGATTCATTTGAT GCTGCTGTTGCTCTTCATGCTTCTCGTTATAAATCAGCAGAGCAGCCAGCCCTTGCATCC CATTCAACCATCTGGGGTGCTGAAGAAACCTGTGACGCATTCAGTTTTAACCTACCAGCA TCTAGGAAGCGAGAAGGTTCAAATAATTCAGCTAGCAGCTCTCCCGATAGTGACAGTGAT GTTCATCCTTCAAACTCAGAAGGGTTTCAATGTTTTCTTCAGGACTTAGCTGGAGCGGCG GTTGCTCATAATCCTTGTATTGACGATGCCAAAGATGTAGAGTCACTTTGTGCTGAATCG CCACCTCGAAGTGACCACGATTCTGCTCCGAAGGATCAATCTCTAGCTGACTTATACTGG CCTGATTCACTTGGACCATTGGACTTGGACATACCGTCCGCGACATACCATGCTGATGAC TTACTCCTAGGGGACAGCCAGAATAGTTGGAACCGCATGATGGCGAATAGCCTGGATGCA TTTCGAAACCTGTCGTTCTTCACGGCAGATAAGAATGACTCGATACCATCCATCATGTAG

Peptide Sequence

PEP ID	Os03t0241100-03
PEP Infomation	pep chromosome:IRGSP-1.0:3:7469781:7475442:1 gene:Os03g0241100 transcript:Os03t0241100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb, DNA-binding domain containing protein. (Os03t0241100-01);Hypothetical conserved gene. (Os03t0241100-02);Myb, DNA-binding domain containing protein. (Os03t0241100-03)
Sequence	MSLVRSAPARQWAAWTRQEEQNFFNALRQVGKNFEKITLRVQSKSKDQVRHYYYRLVRRM KKLLGPEFSLDAKNSKDTIAAMLCWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKD RNKTRKKCPRGDVCLSSSSSAVNRTPGNESFSVKLLAVDVSNGSKVGSSKGSFFKKVTEP NCSNKSGATKGDLSATRTVKQKRRAGGVVASAAYKKWERAAMAGVSLVADAAEELERNTV NADARMLSPSSSNACTVDGLGTNHIKEADQQAPAKLKLQLFPINEATRKALEKDEHNPHL ELTLSARKKISSVLEHLNRKWGNSNIASGELLLFPYCAHQEDLATYQRWTTKDTVAVADV FLSVNSPSVFRLRYGWFSLAELEAGVSEISLTHFENCLIPEDIHAKSPLEACVQKDGNSL SSCAPEQHPCGSKDQSALLFAMPSSTGKSAQVPEQCIDVLPSQFGRQNQDQVTTNQVFEV DQGMDCAAVSEGEWADTLTDISVGYLLTEASRGANTDCPGTSVVKNTLLLENPCSYDSFD AAVALHASRYKSAEQPALASHSTIWGAEETCDAFSFNLPASRKREGSNNSASSSPDSDSD VHPSNSEGFQCFLQDLAGAAVAHNPCIDDAKDVESLCAESPPRSDHDSAPKDQSLADLYW PDSLGPLDLDIPSATYHADDLLLGDSQNSWNRMMANSLDAFRNLSFFTADKNDSIPSIM

Transcript Sequence

Transcript ID	Os03t0241100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7469781:7475442:1 gene:Os03g0241100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb, DNA-binding domain containing protein. (Os03t0241100-01);Hypothetical conserved gene. (Os03t0241100-02);Myb, DNA-binding domain containing protein. (Os03t0241100-03)
Sequence	CGACTCCCGTCTCGTCTCCTCGCGAGCTCGCCCACCCGCCGCCCTGCGCCGATCTCCATC GATTCCGCGACTTCGCGAGCAGTGGCGCCGTCGTCCGTCCTGCTGCTTCCGCCGCATCCT GGTTTGGGGGTTCAACTGAACCCCCTATGTCCCTCGTTAGATCCGCCCCTGCCCGGCAAT GGGCAGCATGGACACGCCAAGAGGAACAAAATTTTTTCAATGCGCTGCGCCAAGTAGGGA AGAATTTTGAGAAGATTACGCTGCGTGTCCAGAGCAAAAGCAAAGATCAGGTCAGACATT ATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTCGGTCCTGAGTTCTCGCTCGATG CAAAAAATTCCAAGGACACCATTGCTGCTATGCTCTGCTGGTGGTCTCTGCTTGAAAAAT TTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACTTTCGTAGAAG CATTGGGAAATCAACTACTAAAGGATAGAAATAAAACCAGAAAAAAGTGTCCACGTGGGG ATGTGTGCCTGTCCTCTTCATCTTCGGCTGTCAACAGGACTCCTGGAAATGAATCTTTCT CAGTAAAACTCTTGGCTGTGGATGTCTCCAATGGTAGCAAAGTAGGATCTTCTAAAGGGT CATTTTTCAAAAAGGTCACAGAACCAAATTGCAGTAACAAGTCAGGTGCAACTAAAGGGG ACCTCTCCGCCACAAGAACTGTGAAACAGAAAAGAAGAGCAGGTGGTGTTGTTGCATCTG CTGCATATAAAAAATGGGAGAGAGCTGCCATGGCTGGTGTTTCTTTGGTTGCTGATGCAG CTGAAGAGCTTGAGCGCAACACAGTGAACGCTGATGCAAGAATGTTATCTCCATCATCAA GCAATGCCTGCACAGTTGATGGTCTTGGCACAAATCATATAAAGGAAGCAGATCAACAAG CACCTGCAAAGCTAAAGTTGCAGCTATTTCCAATAAATGAAGCTACACGAAAGGCATTAG AGAAGGATGAACATAATCCACATCTGGAACTCACATTAAGTGCTAGGAAAAAAATATCAT CAGTACTAGAACATTTGAACCGCAAGTGGGGCAACTCAAACATTGCATCTGGAGAGCTTT TGCTTTTTCCATATTGTGCTCATCAAGAAGATTTAGCTACATATCAGAGGTGGACCACAA AAGATACTGTCGCAGTGGCTGACGTTTTCCTTTCTGTGAATAGCCCATCTGTTTTTCGAT TAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGCAGGCGTAAGTGAAATATCTTTGA CTCATTTTGAGAATTGCTTGATACCTGAAGACATCCATGCCAAATCTCCCTTAGAGGCTT GTGTGCAAAAGGATGGTAATTCGCTCAGTAGTTGTGCTCCTGAGCAACACCCTTGTGGTT CGAAAGATCAGTCAGCATTATTGTTTGCTATGCCATCTAGTACAGGCAAGAGTGCTCAGG TGCCAGAGCAGTGCATTGATGTTCTCCCCTCACAGTTTGGCAGGCAGAATCAAGACCAAG TTACCACGAACCAAGTTTTTGAGGTTGATCAAGGGATGGATTGTGCTGCAGTATCTGAAG GAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTGACAGAAGCTTCCA GAGGTGCTAATACTGATTGTCCAGGGACATCTGTTGTCAAAAACACACTGTTGCTTGAGA ATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCATGCTTCTCGTTATAAAT CAGCAGAGCAGCCAGCCCTTGCATCCCATTCAACCATCTGGGGTGCTGAAGAAACCTGTG ACGCATTCAGTTTTAACCTACCAGCATCTAGGAAGCGAGAAGGTTCAAATAATTCAGCTA GCAGCTCTCCCGATAGTGACAGTGATGTTCATCCTTCAAACTCAGAAGGGTTTCAATGTT TTCTTCAGGACTTAGCTGGAGCGGCGGTTGCTCATAATCCTTGTATTGACGATGCCAAAG ATGTAGAGTCACTTTGTGCTGAATCGCCACCTCGAAGTGACCACGATTCTGCTCCGAAGG ATCAATCTCTAGCTGACTTATACTGGCCTGATTCACTTGGACCATTGGACTTGGACATAC CGTCCGCGACATACCATGCTGATGACTTACTCCTAGGGGACAGCCAGAATAGTTGGAACC GCATGATGGCGAATAGCCTGGATGCATTTCGAAACCTGTCGTTCTTCACGGCAGATAAGA ATGACTCGATACCATCCATCATGTAGAGCTCTGAATACTGGTGCTTCCTTCATGCGCTTG CGTGGTGAAATTGCTACGTTGGCTACGAAGGTTTACCGCCAACGATGCTGTGCATCTCGC TGAAGAGGCTTTATATTGTCCAAGTGAGCTGTTTGTGGCTAGATCCAACAGCTGCGGACT TGCTGTGCGTTTGCAGTCAAGAGGGACGCATGTTGTTGTAAAGTAGTAACATAAGAGCTG TTCGTGCTAACATGTATGTCGTGTAAATTGTGGTGTTCCTGTAAAAAAAAAAAGCTCACA CAATCGCTTGGTTACAATAAAGCTTCTCCTGCCGTGTACCAGATC