Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0240900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7453731:7457759:-1 gene:Os03g0240900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin/FtsZ, GTPase domain containing protein. (Os03t0240900-01)
Sequence

ATGAGGGAGGCGGTGACGGTGCAGGTCGGCGGCTTCGCCAACTACGTCGGCTCCCACTTC
TGGAACTTCCAGGATGAGTTGCTCGGGCTCGCCGACGACCCCGACGCCGACCCAGTCTTC
AAGAACGACGCGCTGGACATGGACGTCCTCTACCGCTCCGGCGAGACGCACCAGGGTATA
CCCACATACTGCCCTCGTCTGGTGTCGGTTGGTTCTCGAGGGTCCCTTGGTTCTTTGAGT
TCATCTGGTAATCTCGGTCAGACCAGTGCTTCTGCAGATCAGCTCAATGTTGCTACATGG
TCTGGAAGTGTAACAAGATCAGTCTCAAAACCTCATGGGCGGAACTTGTTTCTGCAAAGC
TTAGTTGAAGAAGGGCAGAATCCAAGCACTAGCAATGGTGCCAGCAACTCCCAGAAAAGT
GTTGAGGATAAGGACCTGATCGACTGTCTAGAGAATAGCGTCAACTTTTGGACGGATTAT
TCAAAAGTTCAGTATCATCCTCAGAGTTTATATGAGTTACATGGGTCATGGACAGACTTT
GACAAGTTTGATAACTATGGCAGCGCACAAGAGGTTGTTTCAGACTGGTCGCAAATAGAG
GAAATGAATGAGAGGCTAAGGTTCTTTGTTGAAGAATGCGACCATATTCAGGGCATCCAG
TTTATTGTGGATGATTCAGGAGGTTTTTCCAGTGTAGCTGCACAGTTTTTGGAGAACATT
GCTGATGATTACACAAATACACCTGTATTGCTTTACTGTGTGAGGGATCCAATGACCCTT
GGATCATCCAGGAGGAATCAAAGGGAGTCCATTATGAGAGCTCTTCATGATGCTGTTTCA
TTTTCAAAACTTTCGTCCTTTTGCAACCTGATGGTACCCATAGGACCGCCTTCATTAAGT
AGAAGTTACATGTCATCGTATCTTTATATACAAGACGAGAAACCATTCCATGCTAGTGCT
GTTTGTGCTGCAGCAATACATTCAATTACTGTTCCATTTAGATTGCAACGAACGGGCCCG
AGTTCAGACTTGGCACATTCATCTGGTAATCTTGACATTGGTGAACTTCTGCACATTTTA
TCTGATCAAGGTCGGCAGAACATGGTTACTGCTCTGGATGTAGCGATGCCTGCCCCTTCT
TTGACAGATAGAGATGCTATGGGGAACATAGAGATGAAGTTGCACTCTTTGACCCCTGAA
ATCAGCGATGAGGATGAAGATCCTTATTCAGTTGAATCGCTGGTGGTTCATGGAGCTCTT
GATAAAGGTGGGCAAAGGACTTCCATATCACAAGTGAAAGGCTCGGTATGTTCAGTCTAT
GAAGCCAGAGAGACAAAGCCAAAATTTTCCCATCTCTCAGCATCTCTTTGCCCCCTCCCT
GTCCCCCTTCCGTTCCCGTCAATCTTCAGAGGCAACATTGGCCGGCATGGGGAGATCCTT
AGCGACCATGCAGAAGAATCCCAGCCAAAGGGCTCACTCGATATTGAATCGATACCGATG
GCGGCACGATTACGATCAAGCAGCGCCGTCCTGCCTTTCATAGAGAGGCGATCGGGGAGC
CTCCAGAAGCACGGTGTCGCAAGAGGTGCCATCGGGTCTCTGGTCCTCCGTGACTGGGGC
TTCGGGAGGGAGGAGGTGGAAGACATGGCGGAGCACCTAGCAAAGTTACTCGGCCCGTTT
CACCCTGAAATGGATCTTACTTCGGATTCTGACTAG

Peptide Sequence

PEP ID

Os03t0240900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7453731:7457759:-1 gene:Os03g0240900 transcript:Os03t0240900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin/FtsZ, GTPase domain containing protein. (Os03t0240900-01)
Sequence

MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNDALDMDVLYRSGETHQGI
PTYCPRLVSVGSRGSLGSLSSSGNLGQTSASADQLNVATWSGSVTRSVSKPHGRNLFLQS
LVEEGQNPSTSNGASNSQKSVEDKDLIDCLENSVNFWTDYSKVQYHPQSLYELHGSWTDF
DKFDNYGSAQEVVSDWSQIEEMNERLRFFVEECDHIQGIQFIVDDSGGFSSVAAQFLENI
ADDYTNTPVLLYCVRDPMTLGSSRRNQRESIMRALHDAVSFSKLSSFCNLMVPIGPPSLS
RSYMSSYLYIQDEKPFHASAVCAAAIHSITVPFRLQRTGPSSDLAHSSGNLDIGELLHIL
SDQGRQNMVTALDVAMPAPSLTDRDAMGNIEMKLHSLTPEISDEDEDPYSVESLVVHGAL
DKGGQRTSISQVKGSVCSVYEARETKPKFSHLSASLCPLPVPLPFPSIFRGNIGRHGEIL
SDHAEESQPKGSLDIESIPMAARLRSSSAVLPFIERRSGSLQKHGVARGAIGSLVLRDWG
FGREEVEDMAEHLAKLLGPFHPEMDLTSDSD

Transcript Sequence

Transcript ID

Os03t0240900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7453731:7457759:-1 gene:Os03g0240900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin/FtsZ, GTPase domain containing protein. (Os03t0240900-01)
Sequence

CGATTTGTCGCGCCGCTCCCCTCCCCGTCACGGCCGCCGCCGCCGCTGCCGCCGTTTGGC
TGAGCACCTCGCCGCCGGCGCTATTCCCCACCGGGGCGGCCTCGCCGGCGTATCTGTGGT
GATTTGTGCTGCGAGAGAAACTTCTTTGTCGACTCCGCCGCCGCGGTTGCGGTTCAGGAG
CTTGCCGAGCTCGGCGAGGGGCGGCGGCAATGAGGGAGGCGGTGACGGTGCAGGTCGGCG
GCTTCGCCAACTACGTCGGCTCCCACTTCTGGAACTTCCAGGATGAGTTGCTCGGGCTCG
CCGACGACCCCGACGCCGACCCAGTCTTCAAGAACGACGCGCTGGACATGGACGTCCTCT
ACCGCTCCGGCGAGACGCACCAGGGTATACCCACATACTGCCCTCGTCTGGTGTCGGTTG
GTTCTCGAGGGTCCCTTGGTTCTTTGAGTTCATCTGGTAATCTCGGTCAGACCAGTGCTT
CTGCAGATCAGCTCAATGTTGCTACATGGTCTGGAAGTGTAACAAGATCAGTCTCAAAAC
CTCATGGGCGGAACTTGTTTCTGCAAAGCTTAGTTGAAGAAGGGCAGAATCCAAGCACTA
GCAATGGTGCCAGCAACTCCCAGAAAAGTGTTGAGGATAAGGACCTGATCGACTGTCTAG
AGAATAGCGTCAACTTTTGGACGGATTATTCAAAAGTTCAGTATCATCCTCAGAGTTTAT
ATGAGTTACATGGGTCATGGACAGACTTTGACAAGTTTGATAACTATGGCAGCGCACAAG
AGGTTGTTTCAGACTGGTCGCAAATAGAGGAAATGAATGAGAGGCTAAGGTTCTTTGTTG
AAGAATGCGACCATATTCAGGGCATCCAGTTTATTGTGGATGATTCAGGAGGTTTTTCCA
GTGTAGCTGCACAGTTTTTGGAGAACATTGCTGATGATTACACAAATACACCTGTATTGC
TTTACTGTGTGAGGGATCCAATGACCCTTGGATCATCCAGGAGGAATCAAAGGGAGTCCA
TTATGAGAGCTCTTCATGATGCTGTTTCATTTTCAAAACTTTCGTCCTTTTGCAACCTGA
TGGTACCCATAGGACCGCCTTCATTAAGTAGAAGTTACATGTCATCGTATCTTTATATAC
AAGACGAGAAACCATTCCATGCTAGTGCTGTTTGTGCTGCAGCAATACATTCAATTACTG
TTCCATTTAGATTGCAACGAACGGGCCCGAGTTCAGACTTGGCACATTCATCTGGTAATC
TTGACATTGGTGAACTTCTGCACATTTTATCTGATCAAGGTCGGCAGAACATGGTTACTG
CTCTGGATGTAGCGATGCCTGCCCCTTCTTTGACAGATAGAGATGCTATGGGGAACATAG
AGATGAAGTTGCACTCTTTGACCCCTGAAATCAGCGATGAGGATGAAGATCCTTATTCAG
TTGAATCGCTGGTGGTTCATGGAGCTCTTGATAAAGGTGGGCAAAGGACTTCCATATCAC
AAGTGAAAGGCTCGGTATGTTCAGTCTATGAAGCCAGAGAGACAAAGCCAAAATTTTCCC
ATCTCTCAGCATCTCTTTGCCCCCTCCCTGTCCCCCTTCCGTTCCCGTCAATCTTCAGAG
GCAACATTGGCCGGCATGGGGAGATCCTTAGCGACCATGCAGAAGAATCCCAGCCAAAGG
GCTCACTCGATATTGAATCGATACCGATGGCGGCACGATTACGATCAAGCAGCGCCGTCC
TGCCTTTCATAGAGAGGCGATCGGGGAGCCTCCAGAAGCACGGTGTCGCAAGAGGTGCCA
TCGGGTCTCTGGTCCTCCGTGACTGGGGCTTCGGGAGGGAGGAGGTGGAAGACATGGCGG
AGCACCTAGCAAAGTTACTCGGCCCGTTTCACCCTGAAATGGATCTTACTTCGGATTCTG
ACTAGATCATCTTCAAAAATCTTACTTGGAGAATCAAGCATGATCTATCTGTTACAATGT
ATGTGGATTGTTGTAATACTGAATTTGTTTTTCAGAGGGTTTTCAGATACTGAAAATTCA
TGCTCATGTGGCTGGCTGTTTTGAAATCAAGAATGAGAGATCTGAATCTATGCTATGGTA
GAATTTCTTTTTCTTGTGC