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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0240800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:7449822:7453038:1 gene:Os03g0240800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AGL157Cp. (Os03t0240800-01);Similar to AGL157Cp. (Os03t0240800-02)
Sequence

ATGAGCCGGAGCCTGGGGATCCCGGTGAAGCTGCTGCACGAGGCGGCGGGGCACGTGGTG
ACGGTGGAGCTCAAGACCGGCGAGGTGTACCGCGGCGCCATGGTGGAGTGCGAGGACAAC
TGGAACTGCCAGCTCGACAACATCACCTTCACCGCCAAGGATGGCAAGGTGTCGCAGCTG
GAGCACGTCTTCATCAGAGGAAGCAGAGTGAGATTTATGATTATACCGGATATGCTCAAG
AACGCACCCATGTTCAAGCGCCTGGAAGCAAGGATTAGGGGCAAAGGATCAGCTATTGGA
GTCGGGCGTGGCCGTGCGGTTGCAATGCGTGCCCGGGCTGCTGCTGGTCGTGGTGGTGGT
CCTGTTGGACGGGGTGGTGCACCTCCGGTGAGGAGATAG

Peptide Sequence

PEP ID

Os03t0240800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:7449822:7453038:1 gene:Os03g0240800 transcript:Os03t0240800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AGL157Cp. (Os03t0240800-01);Similar to AGL157Cp. (Os03t0240800-02)
Sequence

MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRAVAMRARAAAGRGGG
PVGRGGAPPVRR

Transcript Sequence

Transcript ID

Os03t0240800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7449822:7453038:1 gene:Os03g0240800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AGL157Cp. (Os03t0240800-01);Similar to AGL157Cp. (Os03t0240800-02)
Sequence

GTCCGCTTTGCTTCGCCTGAGCCCTGAGCCGCCGCCTCCCGTACTCCCTTGCGAGCTGGG
GTTTTAGCGGCGGCGGCGAGAGGAGAGGAGGAGGAGGAGAGGGGAAGATGAGCCGGAGCC
TGGGGATCCCGGTGAAGCTGCTGCACGAGGCGGCGGGGCACGTGGTGACGGTGGAGCTCA
AGACCGGCGAGGTGTACCGCGGCGCCATGGTGGAGTGCGAGGACAACTGGAACTGCCAGC
TCGACAACATCACCTTCACCGCCAAGGATGGCAAGGTGTCGCAGCTGGAGCACGTCTTCA
TCAGAGGAAGCAGAGTGAGATTTATGATTATACCGGATATGCTCAAGAACGCACCCATGT
TCAAGCGCCTGGAAGCAAGGATTAGGGGCAAAGGATCAGCTATTGGAGTCGGGCGTGGCC
GTGCGGTTGCAATGCGTGCCCGGGCTGCTGCTGGTCGTGGTGGTGGTCCTGTTGGACGGG
GTGGTGCACCTCCGGTGAGGAGATAGATTGTCTGTCATCTATTATCTGCCTGAGGAAGTT
GATGCCTTAATTTGAAAACATTGCTTGAGAATTAAACAGCCAGTGTGCATCTTGTCTGAT
CAATCCGCTTAAAGGAGGATGCATGCATGTTGGTGGCGTCGATTTCATGTATTTTTAATG
TTAGATATGGTAGGTTGAGTATGATATTTCAAAGGTAGAAACATTGTGTTCGTTAACCTG
ATTTGAATGACAAGACCAGTTTCCCCTGTCATTGAGCGAATTTCCTTTTGTATCTACCAG
TTTAGTGGCCGTTTGGAACGCAGTGATTCTTAAAATTCATGTGCTCCAAAGGCCTAGTGG
TTATCTGGCAACTTCCTGAATCGGATGCTTCTTATAAGTTATTATAACGCACTTTGTATC
TTCATGGTC