Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0240500-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:7434069:7438005:-1 gene:Os03g0240500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc34-2 protein. (Os03t0240500-01);Similar to Toc34-2 protein. (Os03t0240500-02)
Sequence

ATGTCGGCGGCGCCGATACCCCGCGAGTGGGTGGGGCTGCAGCAGTTTCCGGCGGCTACC
CAGACCAAGCTGCACGAGCTCCTCGGCAAGCTCAAGGAGGAGAATGTGAGCACATTGACA
ATTCTGGTGATGGGGAAGGGCGGGGTGGGGAAGTCATCCACCGTCAACTCCATCGTTGGC
GAGAGGGTCGCTACTGTCAGCGCCTTCCAGTCCGAGGGTCTCAGGCCGATGATGTGTTCT
CGCACCAGGGCAGGCTTCACCTTGAACATTATTGACACTCCTGGGCTCATTGAAGGTGGA
TACATCAATGAGCAGGCTGTTGAGATCATAAAAAGGTTTCTTCTGGGCAAGACTATTGAT
GTCCTCCTTTATGTGGATCGATTGGATGCATACAGAATGGACACGTTGGATGATCAAGTT
ATTAGAGCTGTCACCAATTCATTTGGAAAGGCCATTTGGCGAAGAACATTGGTTGTATTA
ACACATGCTCAGCTCTCACCACCTGATGGACTTGACTATAACGATTTCTTTACAAAAAGA
TCTGAGTCACTTTTGCGATACATTCGTGCTGGTGCAGGAGTCAGCAAACGAGAACTTGGG
GATTTTCCCTTGCCAATTGCATTGGTGGAGAACAGTGGAAGGTGCAAAACTAATGAGAAT
GGAGAGAAGGTTCTCCCTGATGGAACTCCATGGATTCCGAACTTGATGAAAGAGATTACT
ACTGTTGTCTCAAACGGGAGCAAATCCATTCATGTTGATCAAAAGCTAATAGATGGTCCA
AATCCCAACAATCGCTGGAAGATGTTCATACCGCTCATCCTTATGGTGGAGTACTTTTTG
GTTGTAAAAGGCATCCGAAGGGCCATTCATGCTGACATATCAAACGGGAAGCTAGATGAC
TGGGAACAGCGTTACAGAGACTTGGTTGGAAGCAAGGACCCGGTAGACCAGAAAGGTTCA
TCATCCGGCAACCGCAAGGCTTGA

Peptide Sequence

PEP ID

Os03t0240500-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:7434069:7438005:-1 gene:Os03g0240500 transcript:Os03t0240500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc34-2 protein. (Os03t0240500-01);Similar to Toc34-2 protein. (Os03t0240500-02)
Sequence

MSAAPIPREWVGLQQFPAATQTKLHELLGKLKEENVSTLTILVMGKGGVGKSSTVNSIVG
ERVATVSAFQSEGLRPMMCSRTRAGFTLNIIDTPGLIEGGYINEQAVEIIKRFLLGKTID
VLLYVDRLDAYRMDTLDDQVIRAVTNSFGKAIWRRTLVVLTHAQLSPPDGLDYNDFFTKR
SESLLRYIRAGAGVSKRELGDFPLPIALVENSGRCKTNENGEKVLPDGTPWIPNLMKEIT
TVVSNGSKSIHVDQKLIDGPNPNNRWKMFIPLILMVEYFLVVKGIRRAIHADISNGKLDD
WEQRYRDLVGSKDPVDQKGSSSGNRKA

Transcript Sequence

Transcript ID

Os03t0240500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7434069:7438005:-1 gene:Os03g0240500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc34-2 protein. (Os03t0240500-01);Similar to Toc34-2 protein. (Os03t0240500-02)
Sequence

CCTCGACCTCGCCGCAAATCCTCCGCCGCTCCTCCGCCGCTAGGGCATAACCGCCCGCCT
CTCGCCGGCATCCGCATCTCCCGGGGAAGGGAAGGGAAGGGAAGGGAAGGAAGGAAGGTG
AGGGCGGATATGTCGGCGGCGCCGATACCCCGCGAGTGGGTGGGGCTGCAGCAGTTTCCG
GCGGCTACCCAGACCAAGCTGCACGAGCTCCTCGGCAAGCTCAAGGAGGAGAATGTGAGC
ACATTGACAATTCTGGTGATGGGGAAGGGCGGGGTGGGGAAGTCATCCACCGTCAACTCC
ATCGTTGGCGAGAGGGTCGCTACTGTCAGCGCCTTCCAGTCCGAGGGTCTCAGGCCGATG
ATGTGTTCTCGCACCAGGGCAGGCTTCACCTTGAACATTATTGACACTCCTGGGCTCATT
GAAGGTGGATACATCAATGAGCAGGCTGTTGAGATCATAAAAAGGTTTCTTCTGGGCAAG
ACTATTGATGTCCTCCTTTATGTGGATCGATTGGATGCATACAGAATGGACACGTTGGAT
GATCAAGTTATTAGAGCTGTCACCAATTCATTTGGAAAGGCCATTTGGCGAAGAACATTG
GTTGTATTAACACATGCTCAGCTCTCACCACCTGATGGACTTGACTATAACGATTTCTTT
ACAAAAAGATCTGAGTCACTTTTGCGATACATTCGTGCTGGTGCAGGAGTCAGCAAACGA
GAACTTGGGGATTTTCCCTTGCCAATTGCATTGGTGGAGAACAGTGGAAGGTGCAAAACT
AATGAGAATGGAGAGAAGGTTCTCCCTGATGGAACTCCATGGATTCCGAACTTGATGAAA
GAGATTACTACTGTTGTCTCAAACGGGAGCAAATCCATTCATGTTGATCAAAAGCTAATA
GATGGTCCAAATCCCAACAATCGCTGGAAGATGTTCATACCGCTCATCCTTATGGTGGAG
TACTTTTTGGTTGTAAAAGGCATCCGAAGGGCCATTCATGCTGACATATCAAACGGGAAG
CTAGATGACTGGGAACAGCGTTACAGAGACTTGGTTGGAAGCAAGGACCCGGTAGACCAG
AAAGGTTCATCATCCGGCAACCGCAAGGCTTGAGCTGAAGAATGATACCGCATGCATCGT
GACCCATTCAATTCTCTGTGCTTTTCTTTTTGCGCTCTATTCCAGTGATCTATTTGGGAA
GCTTTATAGAGTTATCTGGGACAATTTGAGCAAATTTGCTCTTGTTTTTAGTTGCTAAAA
AAACTGTACTGAATTTTTTTGTGCTGTCGCAATTTTGCAAATGTTGTTGATCGAAACTTC