Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0238300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7305284:7308499:-1 gene:Os03g0238300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os03t0238300-01);Similar to type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (Os03t0238300-02)
Sequence	ATGCTAGAGAACCAGAGGCAAGCGGAGGTTCTTTGGCCGAGGCTGGTGGCGAACAAGCTC TTCAGGAAGCCATCCGGCAGCCATGCCTTCGTCGCCGACTTCCCGATGGCCGTTGATGAC GACTTCGATGGCGAGGCGGTGCCGGCGGCGGTGGAGTCGTTCGACGACGATGGTTGCAGC CCCGACGCCGACGCCTGCCGCAGCGTGAAGCGGCCGCGGCCGCGGCCGCAGCAGCGAGCG AGCAACAAGACGCTCAAGTACAGGCTGTTCGCGAGCACGTGGAACGTCGGCGGCGTCGCG CCACCGGACGACCTCGACCTGTCGGACTGGCTCGACACGAGGAACGCCGCCTACGACATC TACGTCCTCGGATTCCAGGAGGTGGTGCCGTTGAGCGCGCGGAACGTGCTGGGCGCGGAC AAGAAGCGCGTCGGGATGCGCTGGAACGAGCTCGTGCGCGCGGCGCTGAACCGGTCGTCG CCGTCGGCGCCGAACTCCTCCCGTGACCAGAGAGAGGCCAAGGGCACCGGCGGCGGCGCA GCCGCAGCCGCAGCCGGAGGAGGGGAGATAAAGCAGCAGGCGGCGCAGCAGAAGGTTCAC CCGGTGCGGGGCGGCATCGGCGGCGGTGGCGGCGAGCTCGCCTGCAGGGACTACCGGTGC GTGGTGAGCAAGCAGATGGTCGGCATCCTCCTCACCGTCTGGGTCCGCGCCGACCTCGCC CGCTTCGTCCGCCGCGCCAGCGTCTCCTGCGTCGGCTGCGGCGTCATGGGCTGCCTCGGC AACAAGGGCGCCGTGTCCGTCAGGTTCTGGCTCCACGACACGAGCTTCTGCGTGGCGTGC TGCCACCTCGCGTCCGGCGGCCGCGACGGCGACGAGGCGCACCGCAACGCCGACGCCACG GAGATCCTCTCCCGGACGACCTTCCCCCGGGGGCACTCGCTCAACCTCCCCCAGAAGATT CTAGACCACGACCGAGTGATCCTGCTTGGGGACCTCAACTACAGGATCTCCCTGCCGGAG GCGAAGACGAGGTTGCTGGTGGAGAGGCAGGACTGGAAGACGCTGCTCGAAAATGACCAG CTGCGAAGCGAGGTGGAATCGGAAGGAGGCGCATTCCATGGCTGGAACGAGGGTGCCATC GCCTTCTCGCCGACGTACAAGTACTACCCCAACTCCGACACCTACTACGGCTGCGCCTCC CATGGCAGGAAAGGCGAGAAGCGGCGCGCGCCGGCGTGGTGTGACCGGATACTATGGCGC GGCGCCGGGCTGAAGCAGAAGCGGTACGACCGGTGCGAGTCGCGGCTGTCGGACCACCGG CCGGTGAGGGCGCTGTTCGAGGTGGAGGTGGGGGCGCCGAGGAGGAACCTCAACTCGCTG CGGAGCTTCTTCCTGTCGGAGAGGTTCGACGGCGGGAGGAGCGCCGCCGCCGACCTGCTC CGGGAGGATGGCACCGCCAGCAGCGCGAGATTCGGCGACACCATTTGA

Peptide Sequence

PEP ID	Os03t0238300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7305284:7308499:-1 gene:Os03g0238300 transcript:Os03t0238300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os03t0238300-01);Similar to type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (Os03t0238300-02)
Sequence	MLENQRQAEVLWPRLVANKLFRKPSGSHAFVADFPMAVDDDFDGEAVPAAVESFDDDGCS PDADACRSVKRPRPRPQQRASNKTLKYRLFASTWNVGGVAPPDDLDLSDWLDTRNAAYDI YVLGFQEVVPLSARNVLGADKKRVGMRWNELVRAALNRSSPSAPNSSRDQREAKGTGGGA AAAAAGGGEIKQQAAQQKVHPVRGGIGGGGGELACRDYRCVVSKQMVGILLTVWVRADLA RFVRRASVSCVGCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDEAHRNADAT EILSRTTFPRGHSLNLPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDWKTLLENDQ LRSEVESEGGAFHGWNEGAIAFSPTYKYYPNSDTYYGCASHGRKGEKRRAPAWCDRILWR GAGLKQKRYDRCESRLSDHRPVRALFEVEVGAPRRNLNSLRSFFLSERFDGGRSAAADLL REDGTASSARFGDTI

Transcript Sequence

Transcript ID	Os03t0238300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7305284:7308499:-1 gene:Os03g0238300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os03t0238300-01);Similar to type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (Os03t0238300-02)
Sequence	AGTTTCTTCCCTTCGTCCTCGTCTCCTCGACCTCACCACCCGTCCATCCCTACCTACCTC CCTACGGATTGGTCGCCATGCTAGAGAACCAGAGGCAAGCGGAGGTTCTTTGGCCGAGGC TGGTGGCGAACAAGCTCTTCAGGAAGCCATCCGGCAGCCATGCCTTCGTCGCCGACTTCC CGATGGCCGTTGATGACGACTTCGATGGCGAGGCGGTGCCGGCGGCGGTGGAGTCGTTCG ACGACGATGGTTGCAGCCCCGACGCCGACGCCTGCCGCAGCGTGAAGCGGCCGCGGCCGC GGCCGCAGCAGCGAGCGAGCAACAAGACGCTCAAGTACAGGCTGTTCGCGAGCACGTGGA ACGTCGGCGGCGTCGCGCCACCGGACGACCTCGACCTGTCGGACTGGCTCGACACGAGGA ACGCCGCCTACGACATCTACGTCCTCGGATTCCAGGAGGTGGTGCCGTTGAGCGCGCGGA ACGTGCTGGGCGCGGACAAGAAGCGCGTCGGGATGCGCTGGAACGAGCTCGTGCGCGCGG CGCTGAACCGGTCGTCGCCGTCGGCGCCGAACTCCTCCCGTGACCAGAGAGAGGCCAAGG GCACCGGCGGCGGCGCAGCCGCAGCCGCAGCCGGAGGAGGGGAGATAAAGCAGCAGGCGG CGCAGCAGAAGGTTCACCCGGTGCGGGGCGGCATCGGCGGCGGTGGCGGCGAGCTCGCCT GCAGGGACTACCGGTGCGTGGTGAGCAAGCAGATGGTCGGCATCCTCCTCACCGTCTGGG TCCGCGCCGACCTCGCCCGCTTCGTCCGCCGCGCCAGCGTCTCCTGCGTCGGCTGCGGCG TCATGGGCTGCCTCGGCAACAAGGGCGCCGTGTCCGTCAGGTTCTGGCTCCACGACACGA GCTTCTGCGTGGCGTGCTGCCACCTCGCGTCCGGCGGCCGCGACGGCGACGAGGCGCACC GCAACGCCGACGCCACGGAGATCCTCTCCCGGACGACCTTCCCCCGGGGGCACTCGCTCA ACCTCCCCCAGAAGATTCTAGACCACGACCGAGTGATCCTGCTTGGGGACCTCAACTACA GGATCTCCCTGCCGGAGGCGAAGACGAGGTTGCTGGTGGAGAGGCAGGACTGGAAGACGC TGCTCGAAAATGACCAGCTGCGAAGCGAGGTGGAATCGGAAGGAGGCGCATTCCATGGCT GGAACGAGGGTGCCATCGCCTTCTCGCCGACGTACAAGTACTACCCCAACTCCGACACCT ACTACGGCTGCGCCTCCCATGGCAGGAAAGGCGAGAAGCGGCGCGCGCCGGCGTGGTGTG ACCGGATACTATGGCGCGGCGCCGGGCTGAAGCAGAAGCGGTACGACCGGTGCGAGTCGC GGCTGTCGGACCACCGGCCGGTGAGGGCGCTGTTCGAGGTGGAGGTGGGGGCGCCGAGGA GGAACCTCAACTCGCTGCGGAGCTTCTTCCTGTCGGAGAGGTTCGACGGCGGGAGGAGCG CCGCCGCCGACCTGCTCCGGGAGGATGGCACCGCCAGCAGCGCGAGATTCGGCGACACCA TTTGATGCTTTCTTGCAGATAAACAGAGAGAGGATCAGTGGAAGAAGAGGATGAGAGATC TAGAGAAAGAGAATCAGAGAGACAGAGAGGGTGTAATGTAAATTGATTATTCTGTCCTGA GTAAATGTTCGTATATAATCTGCAGTATAGCTAGGATACAGACTGTTCCTGACTTCCTGT AACTATACATATGTACTCTTCATGATCAGAAATTCACAATACCAGATCAATTTGTCT