Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0237600-04
CDS Infomation	cds chromosome:IRGSP-1.0:3:7277308:7284232:-1 gene:Os03g0237600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATMAP65-6; microtubule binding. (Os03t0237600-01);MAP65/ASE1 family protein. (Os03t0237600-02);MAP65/ASE1 family protein. (Os03t0237600-04)
Sequence	ATGGGCGAGATGGTCTTGGCCGGGTATGGCATGGACAAGGCGGTGAGGAGCAGCGTCAGC TTCGAGACGCCGTGCGGCAGGCTGCTGCGCGAGCTCGAGCAAATATGGACTGAGATTGGG GAGCGCGAAGAAGATAAAGATCGCATGTTCTTAGAACTTGAAACAGAGTGCATGCGTGTG TACCGTCGAAAGGTTGATAGTGCCAATGCTGAGAGATCCCAGCTCCGTCAGTCATTGATG GCCAAAGAAGCAGAGCTTAAAGTTTTAGTGGCTTCAATAGGTGAAATTACCCCAAAATTT AAGGTGGATGAAAAGCAATCATTGAAAGAGCAACTTGCCAAAGTGACGCCTCTACTGGAA GATCTCAGGTCAAAGAAAGAAGAAAGAATAAAACAATTCTCACTTGTCCAATCTCAAATC GAGAAGATAAAAGCACAAATTTCGGATCACAATAATCAGCATGACAATGGTCCGGTCAAT CATTCCAAGGACAATCATGATTTGTCAACCAGAAGGCTTTCTGATCTTCAAGCGGAGCTT CGCAATTTACAGAAAGAGAAGTCTGATCGCCTTCAGAAGGTCTTCATATACGTCGATGAA GTGCACTGCCTATGCTCTGTGCTTGGGATGGATTTTGCAAAGACAGTTAAAGATGTGCAT CCAAGTTTACATGGGGCCAACTCAGAAAATTCAACGAATATCAGTGATAGCACTCTTGAA GGTCTTACTGAGACCATCCTTAAGCTCAAAGCAGAAAAGAGGACTAGAGTTTCGAAGTTG CAAGAAATCGTCGGAAAGCTCCACAAGTTATGGAATTTGATGGAGTCAACTGAACAAGAG AGGAGACATTTCACCAGAGTAGCTGCTGTTCTTGGATCTACTGAGGAAGAGATCACTTCA TCTAGTGTCCTGTCGCTGGAGACAATTCAGGAGACAGAAGAGGAAGTTGAGAGACTAACT AAACAAAAGGCAAGTAGAATGAAGGAGCTTGTTCTTAAGAAAAGGTTAGAGCTAGAAGAT ATCTGCAGTAATGCGCATATGGAGCCTGATATGAGCACAGCACCTGAGAAGATAACCGCA TTGATTGATTCTGGTCTAGTGGATCCTTGTGAACTTCTTTCCAGCATTGAAACACAAATA GCAAAAGCGAGGGAGGAGTCCCTAACCAGGAAAGATATCATGGAGAAAGTAGACAGATGG CTATCAGCTTGTGATGAAGAAACTTGGCTTGAGGAATATAACCAAGATAGTAGCAGGTAT AGTGCTGGTAGGGGTGCCCATATAAATCTCAAGCGTGCAGAGAAGGCAAGGATACTTGTT CAAAAAATACCATCAATGATTGACAACTTGATAGCTAAAACATTTGCGTGGGAGGATGAA AGAAGTGTGCCATTTTTATATGATGGAGCCCGTCTTGTTGCCATTTTGGAGGAGCAAAAA CTCAGAAGGGTACAAAAGGAAGAAGACAAGAGACGACACCGGGACCAGAAGAAACTGCAA AGCTTATTGCTTAAGGAGAAAGAGTTGATTTTCGGCTCCAAACCTAGTCCAAAAAAGACA AGCAGCTTTAATAGGAGGACGAGCAGCCATCACCCGAATGGAAATGGAGCTGGGTTCATG ACCCCGGTGCCCCGTAGAGTTTCTGCAGGCAGTGCCACTCCTGAGCTTCTAACTCCACGC TCATATTCTGGACGGTACAATAATTACTTCAAAGAGAACAGGAGGCTGGCTGCTGCACCA CTGAACTTCTCAACGGTTTCGAAGGAGGATAGTATGTCATCCTTTGCCTCCATCAGCGGC TCAGAACCTGATTCTCCTTTGGTTTTGCACTGA

Peptide Sequence

PEP ID	Os03t0237600-04
PEP Infomation	pep chromosome:IRGSP-1.0:3:7277308:7284232:-1 gene:Os03g0237600 transcript:Os03t0237600-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATMAP65-6; microtubule binding. (Os03t0237600-01);MAP65/ASE1 family protein. (Os03t0237600-02);MAP65/ASE1 family protein. (Os03t0237600-04)
Sequence	MGEMVLAGYGMDKAVRSSVSFETPCGRLLRELEQIWTEIGEREEDKDRMFLELETECMRV YRRKVDSANAERSQLRQSLMAKEAELKVLVASIGEITPKFKVDEKQSLKEQLAKVTPLLE DLRSKKEERIKQFSLVQSQIEKIKAQISDHNNQHDNGPVNHSKDNHDLSTRRLSDLQAEL RNLQKEKSDRLQKVFIYVDEVHCLCSVLGMDFAKTVKDVHPSLHGANSENSTNISDSTLE GLTETILKLKAEKRTRVSKLQEIVGKLHKLWNLMESTEQERRHFTRVAAVLGSTEEEITS SSVLSLETIQETEEEVERLTKQKASRMKELVLKKRLELEDICSNAHMEPDMSTAPEKITA LIDSGLVDPCELLSSIETQIAKAREESLTRKDIMEKVDRWLSACDEETWLEEYNQDSSRY SAGRGAHINLKRAEKARILVQKIPSMIDNLIAKTFAWEDERSVPFLYDGARLVAILEEQK LRRVQKEEDKRRHRDQKKLQSLLLKEKELIFGSKPSPKKTSSFNRRTSSHHPNGNGAGFM TPVPRRVSAGSATPELLTPRSYSGRYNNYFKENRRLAAAPLNFSTVSKEDSMSSFASISG SEPDSPLVLH

Transcript Sequence

Transcript ID	Os03t0237600-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7277308:7284232:-1 gene:Os03g0237600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATMAP65-6; microtubule binding. (Os03t0237600-01);MAP65/ASE1 family protein. (Os03t0237600-02);MAP65/ASE1 family protein. (Os03t0237600-04)
Sequence	CTGGTCTCCACCCTCCCTTTCTCTCTCTAGTCCTCTAGAGCCGAGGGTTGCTGCGAGGAA AGCGTAGGAGAGAGGGTTGCTGGCTGCAGCCCCGGCGAGAAGCGCCATTGTTGTCGTCGT TGGGCCAAGAACCAAGAAACCAAGAAGACAAGAGGAGGAGGAGGGGGGAAGAAGACGGAA GAGAGAGAGGAAGAGGCACTGGATAGGTGCATCCTTTGCCTCTAGCCGCTTTCTCTTTCT CCTTCCTGGAGGGGGGAGAGAGAGAGAGGAGTGGGAGAGGAAAGGAGAGTAGATGGGCGA GATGGTCTTGGCCGGGTATGGCATGGACAAGGCGGTGAGGAGCAGCGTCAGCTTCGAGAC GCCGTGCGGCAGGCTGCTGCGCGAGCTCGAGCAAATATGGACTGAGATTGGGGAGCGCGA AGAAGATAAAGATCGCATGTTCTTAGAACTTGAAACAGAGTGCATGCGTGTGTACCGTCG AAAGGTTGATAGTGCCAATGCTGAGAGATCCCAGCTCCGTCAGTCATTGATGGCCAAAGA AGCAGAGCTTAAAGTTTTAGTGGCTTCAATAGGTGAAATTACCCCAAAATTTAAGGTGGA TGAAAAGCAATCATTGAAAGAGCAACTTGCCAAAGTGACGCCTCTACTGGAAGATCTCAG GTCAAAGAAAGAAGAAAGAATAAAACAATTCTCACTTGTCCAATCTCAAATCGAGAAGAT AAAAGCACAAATTTCGGATCACAATAATCAGCATGACAATGGTCCGGTCAATCATTCCAA GGACAATCATGATTTGTCAACCAGAAGGCTTTCTGATCTTCAAGCGGAGCTTCGCAATTT ACAGAAAGAGAAGTCTGATCGCCTTCAGAAGGTCTTCATATACGTCGATGAAGTGCACTG CCTATGCTCTGTGCTTGGGATGGATTTTGCAAAGACAGTTAAAGATGTGCATCCAAGTTT ACATGGGGCCAACTCAGAAAATTCAACGAATATCAGTGATAGCACTCTTGAAGGTCTTAC TGAGACCATCCTTAAGCTCAAAGCAGAAAAGAGGACTAGAGTTTCGAAGTTGCAAGAAAT CGTCGGAAAGCTCCACAAGTTATGGAATTTGATGGAGTCAACTGAACAAGAGAGGAGACA TTTCACCAGAGTAGCTGCTGTTCTTGGATCTACTGAGGAAGAGATCACTTCATCTAGTGT CCTGTCGCTGGAGACAATTCAGGAGACAGAAGAGGAAGTTGAGAGACTAACTAAACAAAA GGCAAGTAGAATGAAGGAGCTTGTTCTTAAGAAAAGGTTAGAGCTAGAAGATATCTGCAG TAATGCGCATATGGAGCCTGATATGAGCACAGCACCTGAGAAGATAACCGCATTGATTGA TTCTGGTCTAGTGGATCCTTGTGAACTTCTTTCCAGCATTGAAACACAAATAGCAAAAGC GAGGGAGGAGTCCCTAACCAGGAAAGATATCATGGAGAAAGTAGACAGATGGCTATCAGC TTGTGATGAAGAAACTTGGCTTGAGGAATATAACCAAGATAGTAGCAGGTATAGTGCTGG TAGGGGTGCCCATATAAATCTCAAGCGTGCAGAGAAGGCAAGGATACTTGTTCAAAAAAT ACCATCAATGATTGACAACTTGATAGCTAAAACATTTGCGTGGGAGGATGAAAGAAGTGT GCCATTTTTATATGATGGAGCCCGTCTTGTTGCCATTTTGGAGGAGCAAAAACTCAGAAG GGTACAAAAGGAAGAAGACAAGAGACGACACCGGGACCAGAAGAAACTGCAAAGCTTATT GCTTAAGGAGAAAGAGTTGATTTTCGGCTCCAAACCTAGTCCAAAAAAGACAAGCAGCTT TAATAGGAGGACGAGCAGCCATCACCCGAATGGAAATGGAGCTGGGTTCATGACCCCGGT GCCCCGTAGAGTTTCTGCAGGCAGTGCCACTCCTGAGCTTCTAACTCCACGCTCATATTC TGGACGGTACAATAATTACTTCAAAGAGAACAGGAGGCTGGCTGCTGCACCACTGAACTT CTCAACGGTTTCGAAGGAGGATAGTATGTCATCCTTTGCCTCCATCAGCGGCTCAGAACC TGATTCTCCTTTGGTTTTGCACTGAGATCCCATCGTTCGATTGGACATTTTCGAGAATGT CACAGTTGATCTTTTGAGGTTCTGATAATCCTGATTTCCAAATGCTGCATTTCTGGTTAG GGATGAGAGACTTCTCAGCAAGAAGGATGGTAGTGAAGACTATCCACGACATTGGGCCAT TGTGTGTTAACTGGTTGACATTGCTAATGAGTGACGACAGGTTGTGACAGGATTTAGATA AGATTTGCCTGTAGATATATGACCTAACATCTGCGGTGCTGTTGTACCTAAATTACGTCG ATTGATCAGTGGGTTGGTTAGGAAGCATGCCTAAGTTGTGCATTATATTCGTTTTCTTGG TATTCTTTGAGTTTTGTATTTAGTCATTGTTTTGCATGTGAAAAGGAGTTGGTGTTGATT TGCAATCCAAAGGTGCTGTGTAATTTCATCCTGCAGACTCAACCTGAGGCCTTTGATTTG TGTGCTGTACTGCTATGGAAATCGTAGTTCATACTTCATTCAGGAAGGTAACTCAAAGGT CGCATATGTTTTACTACCATTTAGTTCATACTTCATACTTATCTACTCCCTTCGTTTCAC AATGTAAGACTTTCTAATATTGCCCACATACATTTAGATGTTAATGAATCTAGACATATG TGTGTTTAGATTTATTATCTATATGTATGTGGATAATGTTAGAAAGTCTTACATTGTGAA ACGGATGGAGTACTTGATTATCGGTAAGAAATAAAACTATATGTTACAAACCTAACAAGT GGGCTAAGCAATGCAGTAGAAGCAAGTGGACTTGTTACCAATTGCTGCTGCAATTGTGGG ATCAAAACTGTTGGTCAAGGACTGAAGATTTGGGCGAATATTGAATTATATTGATATAAG CTCCTCCTAATGGAGTAACCAAGTCGCTTACAACGGGTAATTAAAATACAGGAAAGAAGA AAACAAGGAGGGAGCATACTAGTACATAATAAAGAGAAAGAAACAGAATTAAACATGGGA GGAGCCCGAAGAAATAGCAATTGAGAAGACAGCCTTCCACCCATCTAGGGCCGGTCCATC TGCTTCTTTGATGTAAAATTCACGCACCTGATGGTGGTTGATTATTGAAGATAACGTTGT TTTTGTGATTCCAAATCCTCCAAAAAGCAGAGGAGATAGAAGCTCTGATAATCTTTCATT GCGATAGAAGCTCTGATAGTCTTCAACTGAGGAAATATTTGGCCAGCACCCCTATTTTGG ACCAGAAAGAAGCAAATTACCTTTTGCTGACGGAGGGAGTACATTTTACAACACCCTTGC TGCATTTTGGTCTTCCAAAGATATAGGGAGGCCTGACATGTGTAAAGAACAAGCCTGTGT AGTAGCTAAAACGCCAGTGAACAGCAGAACAGTAAACAACTTGAGAATTACCCCTTTCTT AGCATGAAACGGCAACTCCAAGATAAAGTTGACACGCAGTAGCAAAGTTCAATTGTATTA CTGTACAGTTTGGCAACACGATTTCATCTTTTGACGC