Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0237250-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7237162:7241445:-1 gene:Os03g0237250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 14, Loose Plant Architecture1 description:Indeterminate domain protein, Shoot gravitropism (Os03t0237250-01)
Sequence	ATGGCACTGGTCAAGAGCCACCACCAAATGTTGGCCTCTTCTTCCACCTCGTCCTCCTCA CCCTCCTCCCAGCAGCAGCAGCCTCCACCGCCGGCGTCGAACTCCTCCAGCCTCGCCGCC GCCGCCGCCGACCAGCCCTCCCCCGCCAAGCGCAAGAGGCGCCCTCCCGGCACGCCAGAC CCAGATGCGGAGGTGGTGGCGCTGTCGCCGAGGACGCTGCTGGAGTCGGACAGGTACGTG TGCGAGATCTGCGGGCAGGGGTTCCAGCGGGAGCAGAACCTGCAGATGCACCGGCGCCGG CACAAGGTGCCGTGGCGGCTGGTCAAGCGCCCCGCGGCGGCGACGGCGGCGGAGGACGGC GGCGCCGCGGGTGGCGGCGGCGGCGCCGGCGGCGGCGCGGGCGGCGGAGGGGCGCGGAAG CGCGTGTTCGTGTGCCCGGAGCCGAGCTGCCTCCACCACGACCCGGCACACGCGCTGGGC GACCTCGTCGGCATCAAGAAGCACTTCCGGCGCAAGCACGGCGGCCGGCGGCAGTGGGTG TGTGCCCGCTGCGCCAAGGGCTACGCCGTCCAGTCCGACTACAAGGCCCACCTCAAGACC TGCGGCACCCGCGGCCACTCCTGCGACTGCGGCCGCGTCTTCTCCCGAGTGGAGAGCTTC ATAGAGCACCAGGATGCGTGTAACTCTGGACGTGTGCGCGGTGAGGTCGTGCCCGTGGCC ACGACGCTGCCGGTCATCCGTCCCGCGGCGCTGCGGCATCATCACCATCATCCGCCGCCG CCGCCGCCTGAGCTGCAGCTCCTCCCGGCGTCCACCACGGCGCCGTTGGCCGCCGCGTTC TCGTCCAACTCCACGACCACCGGCTCCTCCTCCCACGAGCAACACGCGACGACGATGACA ACGACGAAGCTGCAGCTCTCAATCGGCCCCGCCGCCGTCGTCGCCGCGGCGTCCGGCGGC GGCGGCGCCTGCGCCGCGGCGGCAGGAGGGGAGGAGGAGCAGCAGCGGGAAGAGGTGAGG CGCGCGCTGGAGGAGAAGACCGCGGCGGACGCGGCGCGGGAGCGGGCGCGCGAGGAGGCC GCGGCGGCGGAGCGCGCGCTGGAGGACGCCCGCCGCGCGCGCCACCGGGCGCGCGGGGAG CTCGAGAAGGCGCTCGCGCTGCGGGACCACGCGGCGCGCCTGATCGCGCAGGTGACCTGC CACGCGTGCCGGCAGCGCTCGCTCGCCGTGATGTCCATGGCCGCCATCGACGGCCACGGC GCGTCGGCGGTGGCGCGCGAGCACCTGAGGGGCGGCGGCGTCGGCGCCGGCATCTAG

Peptide Sequence

PEP ID	Os03t0237250-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7237162:7241445:-1 gene:Os03g0237250 transcript:Os03t0237250-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 14, Loose Plant Architecture1 description:Indeterminate domain protein, Shoot gravitropism (Os03t0237250-01)
Sequence	MALVKSHHQMLASSSTSSSSPSSQQQQPPPPASNSSSLAAAAADQPSPAKRKRRPPGTPD PDAEVVALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKVPWRLVKRPAAATAAEDG GAAGGGGGAGGGAGGGGARKRVFVCPEPSCLHHDPAHALGDLVGIKKHFRRKHGGRRQWV CARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNSGRVRGEVVPVA TTLPVIRPAALRHHHHHPPPPPPELQLLPASTTAPLAAAFSSNSTTTGSSSHEQHATTMT TTKLQLSIGPAAVVAAASGGGGACAAAAGGEEEQQREEVRRALEEKTAADAARERAREEA AAAERALEDARRARHRARGELEKALALRDHAARLIAQVTCHACRQRSLAVMSMAAIDGHG ASAVAREHLRGGGVGAGI

Transcript Sequence

Transcript ID	Os03t0237250-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7237162:7241445:-1 gene:Os03g0237250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 14, Loose Plant Architecture1 description:Indeterminate domain protein, Shoot gravitropism (Os03t0237250-01)
Sequence	ACACAAACACATACACACACAATGCACCTTCACCTTTCCACCCCATAAAGCCTCCCTTGG CACCCCTATCCCACTAAGGAGCAAAAAGAGAACCAAACCAAGGCAGCTGCTGCAGAGGCA GTAGTAGTAGTAGTAGAAGTAGCTGCTGTGATCTAGCCTCTTGTGGTGGTAGCTCTAGCT CTAGAAGTGGTATTGTGGTGATAAGCTTAAGCTTAAGCTTATTAGTGATCCTCTCCCTTA AAAAGAAGAAAAGCTCCTTGCAGTTATGGCACTGGTCAAGAGCCACCACCAAATGTTGGC CTCTTCTTCCACCTCGTCCTCCTCACCCTCCTCCCAGCAGCAGCAGCCTCCACCGCCGGC GTCGAACTCCTCCAGCCTCGCCGCCGCCGCCGCCGACCAGCCCTCCCCCGCCAAGCGCAA GAGGCGCCCTCCCGGCACGCCAGACCCAGATGCGGAGGTGGTGGCGCTGTCGCCGAGGAC GCTGCTGGAGTCGGACAGGTACGTGTGCGAGATCTGCGGGCAGGGGTTCCAGCGGGAGCA GAACCTGCAGATGCACCGGCGCCGGCACAAGGTGCCGTGGCGGCTGGTCAAGCGCCCCGC GGCGGCGACGGCGGCGGAGGACGGCGGCGCCGCGGGTGGCGGCGGCGGCGCCGGCGGCGG CGCGGGCGGCGGAGGGGCGCGGAAGCGCGTGTTCGTGTGCCCGGAGCCGAGCTGCCTCCA CCACGACCCGGCACACGCGCTGGGCGACCTCGTCGGCATCAAGAAGCACTTCCGGCGCAA GCACGGCGGCCGGCGGCAGTGGGTGTGTGCCCGCTGCGCCAAGGGCTACGCCGTCCAGTC CGACTACAAGGCCCACCTCAAGACCTGCGGCACCCGCGGCCACTCCTGCGACTGCGGCCG CGTCTTCTCCCGAGTGGAGAGCTTCATAGAGCACCAGGATGCGTGTAACTCTGGACGTGT GCGCGGTGAGGTCGTGCCCGTGGCCACGACGCTGCCGGTCATCCGTCCCGCGGCGCTGCG GCATCATCACCATCATCCGCCGCCGCCGCCGCCTGAGCTGCAGCTCCTCCCGGCGTCCAC CACGGCGCCGTTGGCCGCCGCGTTCTCGTCCAACTCCACGACCACCGGCTCCTCCTCCCA CGAGCAACACGCGACGACGATGACAACGACGAAGCTGCAGCTCTCAATCGGCCCCGCCGC CGTCGTCGCCGCGGCGTCCGGCGGCGGCGGCGCCTGCGCCGCGGCGGCAGGAGGGGAGGA GGAGCAGCAGCGGGAAGAGGTGAGGCGCGCGCTGGAGGAGAAGACCGCGGCGGACGCGGC GCGGGAGCGGGCGCGCGAGGAGGCCGCGGCGGCGGAGCGCGCGCTGGAGGACGCCCGCCG CGCGCGCCACCGGGCGCGCGGGGAGCTCGAGAAGGCGCTCGCGCTGCGGGACCACGCGGC GCGCCTGATCGCGCAGGTGACCTGCCACGCGTGCCGGCAGCGCTCGCTCGCCGTGATGTC CATGGCCGCCATCGACGGCCACGGCGCGTCGGCGGTGGCGCGCGAGCACCTGAGGGGCGG CGGCGTCGGCGCCGGCATCTAGCTGATATGTACATGCATGCACATGTACAACTTGTACGT TCACGTGTGTACGTGCACGCGTATGTATGTAAAGCAAGGGGGGTTGGGTGACGACGGTGT AATTCATCTTTTTTTTTAGCCGCAAATTGATGAAGTGTACGTAGTTTCGTAGGTCG