Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0237100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7229093:7231670:1 gene:Os03g0237100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEOXYMUGINEIC ACID SYNTHASE 1 description:Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247). (Os03t0237100-01)
Sequence

ATGAGCGACGGCGGCGCAGGCGCCAAGGGCGCGGGCTTCGGCATGCCGCGCGTCGGCATG
GGCACGGCGGTGCAGGGGCCGAGGCCGGAGCCCATCCGGCGCGCCGTGCTCAAGGCCATC
GAGGCCGGGTACCGCCACTTCGACACCGCGGCGCACTACGAGACCGAGGCGCCCATCGGC
GAGGCCGCCGCCGAGGCCGTGCGGTCCGGCGCCATCGCCTCCCGCGCTGACCTCTTCATC
ACGTCCAAGCTCTGGTGCAGCGACGCGCACCGCGACAGGGTGCTCCCCGCGCTCAGGCAG
ACGCTATGGAACCTTCAGATGGAGTACGTGGACTTGTACCTGGTGCACTGGCCTGTGTCC
ATGAAGCCGGGCCGGTACAAGGCCCCCTTCACCGCCGACGACTTCGTGCCGTTCGACATG
CGGGCCGTCTGGGAGGCCATGGAGGAGTGCCACCGCCTGGGCCTCGCCAAGGCCATCGGC
GTCTGCAACTTCTCCTGCAAAAAGCTCGACACCCTGCTCTCCTTCGCCACCATCCCTCCC
GCCGTCAACCAGGTGGAGGTGAACCCGGTGTGGCAGCAGAGGAAGCTGAGGGAGCTGTGC
AGGGAGAAGGGCGTCCAGATCTGCGCCTACTCGCCGCTGGGCGCCAGCGGCACGCACTGG
GGCAGCGACTCCGTCATGGCCTCCGCCGTGCTCCGCGACATCGCCCAATCCAAGGGCAAG
ACCGTAGCCCAGGTGTGCCTGAGGTGGGTGTACGAGCAAGGGGACTGCCTGATCGTGAAG
AGCTTCGACGAGGCGCGGATGCGGGAGAACCTGGACATCGTCGGATGGGAGCTGACGGAG
GAGGAGAGGCAGAGGATCGCCGGCATCCCGCAGCGGAAGATCAACCGTGCCCTCCGCTTC
GTCTCCGACCACGGGCCCTACAAGTCGCTCGACGACCTCTGGGACGGCGAGATATGA

Peptide Sequence

PEP ID

Os03t0237100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7229093:7231670:1 gene:Os03g0237100 transcript:Os03t0237100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEOXYMUGINEIC ACID SYNTHASE 1 description:Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247). (Os03t0237100-01)
Sequence

MSDGGAGAKGAGFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIG
EAAAEAVRSGAIASRADLFITSKLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVS
MKPGRYKAPFTADDFVPFDMRAVWEAMEECHRLGLAKAIGVCNFSCKKLDTLLSFATIPP
AVNQVEVNPVWQQRKLRELCREKGVQICAYSPLGASGTHWGSDSVMASAVLRDIAQSKGK
TVAQVCLRWVYEQGDCLIVKSFDEARMRENLDIVGWELTEEERQRIAGIPQRKINRALRF
VSDHGPYKSLDDLWDGEI

Transcript Sequence

Transcript ID

Os03t0237100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7229093:7231670:1 gene:Os03g0237100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEOXYMUGINEIC ACID SYNTHASE 1 description:Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247). (Os03t0237100-01)
Sequence

GCAGTCCGTCCAAGAGAGGGGGACACTCTGCCTCCAGCCATGAGCGACGGCGGCGCAGGC
GCCAAGGGCGCGGGCTTCGGCATGCCGCGCGTCGGCATGGGCACGGCGGTGCAGGGGCCG
AGGCCGGAGCCCATCCGGCGCGCCGTGCTCAAGGCCATCGAGGCCGGGTACCGCCACTTC
GACACCGCGGCGCACTACGAGACCGAGGCGCCCATCGGCGAGGCCGCCGCCGAGGCCGTG
CGGTCCGGCGCCATCGCCTCCCGCGCTGACCTCTTCATCACGTCCAAGCTCTGGTGCAGC
GACGCGCACCGCGACAGGGTGCTCCCCGCGCTCAGGCAGACGCTATGGAACCTTCAGATG
GAGTACGTGGACTTGTACCTGGTGCACTGGCCTGTGTCCATGAAGCCGGGCCGGTACAAG
GCCCCCTTCACCGCCGACGACTTCGTGCCGTTCGACATGCGGGCCGTCTGGGAGGCCATG
GAGGAGTGCCACCGCCTGGGCCTCGCCAAGGCCATCGGCGTCTGCAACTTCTCCTGCAAA
AAGCTCGACACCCTGCTCTCCTTCGCCACCATCCCTCCCGCCGTCAACCAGGTGGAGGTG
AACCCGGTGTGGCAGCAGAGGAAGCTGAGGGAGCTGTGCAGGGAGAAGGGCGTCCAGATC
TGCGCCTACTCGCCGCTGGGCGCCAGCGGCACGCACTGGGGCAGCGACTCCGTCATGGCC
TCCGCCGTGCTCCGCGACATCGCCCAATCCAAGGGCAAGACCGTAGCCCAGGTGTGCCTG
AGGTGGGTGTACGAGCAAGGGGACTGCCTGATCGTGAAGAGCTTCGACGAGGCGCGGATG
CGGGAGAACCTGGACATCGTCGGATGGGAGCTGACGGAGGAGGAGAGGCAGAGGATCGCC
GGCATCCCGCAGCGGAAGATCAACCGTGCCCTCCGCTTCGTCTCCGACCACGGGCCCTAC
AAGTCGCTCGACGACCTCTGGGACGGCGAGATATGAGCACTCGCCGGCGACCGCTTCGTG
TTTCCAGGCGCCGGCCGACGTGCGTGCTGCTCTGAGGAACGTAACAACAAAAACTGCGGC
TCTTGACGATCGTGTTGAATAAAGCAAAGTGTGACGATTTCATCGGCTCTGATTGCATAA
TTCCGGAGTGCACACGCTAGCACGTGCGAGAGAGAGAGATATAGGTACATCGAGCGTGTC
AAATCGATCAAAATTGTTATAGACGAGGCCGAGCCGAGCCAAGGAAAAGCTTCCATTAGA
GCATTTACAGTGCTTCTTACTCGC