Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0237000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7223777:7228021:1 gene:Os03g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os03t0237000-01)
Sequence	ATGGCCTCGCCGGCAGCGGCGGCCCCCGCGGCGCTGCTCGTCCTTCTCGCCGCGGCCCTC GCGGCGACCGGCGTCGTCGCCGACGGCTCCGACCACCGCTACAAGGCCAACGAGCTCGTC CCGCTCTACGCCAACAAGGTCGGCCCCTTCCACAACCCCAGTGAGACGTATCGGTACTTT GACCTGCCTTTCTGCTCTCCAGAGAAAGTGAAGGAGAAGAGCGAGGCACTCGGTGAGGTC CTCAATGGGGACCGGTTGGTTGATGCACCTTACAAGCTTGATTTCCGTGTGGATTATGAC TCCAAGCCGGTTTGCTCGAAGAAGCTCACCAAGGAGGAGGTGGCCAAGTTTCGGAATGCG GTAGCAAAGGACTACTACTTCCAGATGTACTACGATGACCTCCCACTGTGGGGATTCATT GGTAAGGTGGAGAAGGGAGGCAAGACAGATCCGAAAGAGTGGAAGTATTACCTGTACAGG CACATCATCTTTGACATCCTCTACAACAATGACCGGGTTATTGAGATCAATGTGCACACT GACCAGAGTGCACTAGTTGACCTGACTGAGGACAAGGAAGCTGATGTTCAATTCCTTTAC TCAGTCAAGTGGAAGGAGACACCCACACCATTTGAGAAGAGGATGGAGAAGTATTCCAGT TCCTCCAACCTCCCACACCATTTGGAGGTCCATTGGTTCTCTATCATAAACTCTTGTGTT ACAGTCCTCCTTTTGACTGGATTCTTGGCGACCATCCTCATGCGAGTACTGAAGAACGAT TTTGTCAAGTATGCCCATGATGAGGAAGCAGCTGATGACCAAGAAGAGTCTGGATGGAAG TATATCCATGGGGATGTCTTCCGGTTCCCCAAGAACAAGTCCTTTTTTTCGGCTGCTCTC GGCACCGGAACTCAACTGTTTGCCCTCACAACCTTTATATTCCTTCTTGCACTTGTTGGA GTATTCTACCCGTACAATCGTGGTGCTCTTTTTACTGCATTGGTTGTCATCTATGCTCTC ACTTCAGGAATTGCTGGGTATATTGCAACCTCTTTCTACTGTCAGCTAGAGGGAACAAAC TGGGTGAGGAACTTGCTGTTGACAGGATGCCTGTTCTGTGGACCCCTATTCCTGACTTTC TGCTTCCTAAACACTGTTGCTATTGCTTATAGTGCAACAGCAGCTTTGCCCTTCGGCACT ATCTGTGTCATTGTGCTCATCTGGACCTTAGTTACATTTCCCCTTCTAGTTTTGGGAGGC ATTGCTGGTAAAAACAGCAAGACTGAATTCCAAGCTCCCTGCCGTACCACCAAATATCCT AGGGAGATTCCTCCACTTCCGTGGTACCGGCAAACAATCCCGCAGATGGCTATGGCTGGG TTTTTACCTTTCAGTGCCATCTATATTGAGCTCTACTACATCTTTGCTAGTGTTTGGGGC CACAGGATTTACACAATTTACAGCATTCTCTTCATAGTCTTCATCATCCTCCTTATTGTT ACTGCCTTCATTACTGTTGCACTGACGTACTTTCAGCTTGCTGCTGAAGACCATGAATGG TGGTGGAGGTCATTCCTATGTGGAGGATCAACTGGATTTTTTGTCTATGGGTATTGTCTG TACTACTATTATGCACGATCAGATATGTCTGGATTTATGCAGACATCATTCTTCTTCGGC TACATGGCTTGCATCTGCTATGCTTTCTTCCTGATGCTGGGCATGATCGGTTTCCGTGCC GCATTGTTCTTTGTCCGTCACATATACAAATCCATCAAGTGTGAGTAA

Peptide Sequence

PEP ID	Os03t0237000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7223777:7228021:1 gene:Os03g0237000 transcript:Os03t0237000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os03t0237000-01)
Sequence	MASPAAAAPAALLVLLAAALAATGVVADGSDHRYKANELVPLYANKVGPFHNPSETYRYF DLPFCSPEKVKEKSEALGEVLNGDRLVDAPYKLDFRVDYDSKPVCSKKLTKEEVAKFRNA VAKDYYFQMYYDDLPLWGFIGKVEKGGKTDPKEWKYYLYRHIIFDILYNNDRVIEINVHT DQSALVDLTEDKEADVQFLYSVKWKETPTPFEKRMEKYSSSSNLPHHLEVHWFSIINSCV TVLLLTGFLATILMRVLKNDFVKYAHDEEAADDQEESGWKYIHGDVFRFPKNKSFFSAAL GTGTQLFALTTFIFLLALVGVFYPYNRGALFTALVVIYALTSGIAGYIATSFYCQLEGTN WVRNLLLTGCLFCGPLFLTFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTFPLLVLGG IAGKNSKTEFQAPCRTTKYPREIPPLPWYRQTIPQMAMAGFLPFSAIYIELYYIFASVWG HRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGFFVYGYCL YYYYARSDMSGFMQTSFFFGYMACICYAFFLMLGMIGFRAALFFVRHIYKSIKCE

Transcript Sequence

Transcript ID	Os03t0237000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7223777:7228021:1 gene:Os03g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os03t0237000-01)
Sequence	ACCCTCTCCAGATCTCCCCTCCGCCTCGTCTCGTCTCGTCTCGGTCTCTCTCTCTATTAA GGAGCAAGCAAAGCGGCCACTCCGGCTCAGATCTCCGCGCGTGCATCCCACCACCCCCAA ACCCTCGCGCGCGCGCTCTCTCTCCTCGTCAACGCGCGCGCCCCCGCCCCCGCCCCGACG AGAGCGATGGCCTCGCCGGCAGCGGCGGCCCCCGCGGCGCTGCTCGTCCTTCTCGCCGCG GCCCTCGCGGCGACCGGCGTCGTCGCCGACGGCTCCGACCACCGCTACAAGGCCAACGAG CTCGTCCCGCTCTACGCCAACAAGGTCGGCCCCTTCCACAACCCCAGTGAGACGTATCGG TACTTTGACCTGCCTTTCTGCTCTCCAGAGAAAGTGAAGGAGAAGAGCGAGGCACTCGGT GAGGTCCTCAATGGGGACCGGTTGGTTGATGCACCTTACAAGCTTGATTTCCGTGTGGAT TATGACTCCAAGCCGGTTTGCTCGAAGAAGCTCACCAAGGAGGAGGTGGCCAAGTTTCGG AATGCGGTAGCAAAGGACTACTACTTCCAGATGTACTACGATGACCTCCCACTGTGGGGA TTCATTGGTAAGGTGGAGAAGGGAGGCAAGACAGATCCGAAAGAGTGGAAGTATTACCTG TACAGGCACATCATCTTTGACATCCTCTACAACAATGACCGGGTTATTGAGATCAATGTG CACACTGACCAGAGTGCACTAGTTGACCTGACTGAGGACAAGGAAGCTGATGTTCAATTC CTTTACTCAGTCAAGTGGAAGGAGACACCCACACCATTTGAGAAGAGGATGGAGAAGTAT TCCAGTTCCTCCAACCTCCCACACCATTTGGAGGTCCATTGGTTCTCTATCATAAACTCT TGTGTTACAGTCCTCCTTTTGACTGGATTCTTGGCGACCATCCTCATGCGAGTACTGAAG AACGATTTTGTCAAGTATGCCCATGATGAGGAAGCAGCTGATGACCAAGAAGAGTCTGGA TGGAAGTATATCCATGGGGATGTCTTCCGGTTCCCCAAGAACAAGTCCTTTTTTTCGGCT GCTCTCGGCACCGGAACTCAACTGTTTGCCCTCACAACCTTTATATTCCTTCTTGCACTT GTTGGAGTATTCTACCCGTACAATCGTGGTGCTCTTTTTACTGCATTGGTTGTCATCTAT GCTCTCACTTCAGGAATTGCTGGGTATATTGCAACCTCTTTCTACTGTCAGCTAGAGGGA ACAAACTGGGTGAGGAACTTGCTGTTGACAGGATGCCTGTTCTGTGGACCCCTATTCCTG ACTTTCTGCTTCCTAAACACTGTTGCTATTGCTTATAGTGCAACAGCAGCTTTGCCCTTC GGCACTATCTGTGTCATTGTGCTCATCTGGACCTTAGTTACATTTCCCCTTCTAGTTTTG GGAGGCATTGCTGGTAAAAACAGCAAGACTGAATTCCAAGCTCCCTGCCGTACCACCAAA TATCCTAGGGAGATTCCTCCACTTCCGTGGTACCGGCAAACAATCCCGCAGATGGCTATG GCTGGGTTTTTACCTTTCAGTGCCATCTATATTGAGCTCTACTACATCTTTGCTAGTGTT TGGGGCCACAGGATTTACACAATTTACAGCATTCTCTTCATAGTCTTCATCATCCTCCTT ATTGTTACTGCCTTCATTACTGTTGCACTGACGTACTTTCAGCTTGCTGCTGAAGACCAT GAATGGTGGTGGAGGTCATTCCTATGTGGAGGATCAACTGGATTTTTTGTCTATGGGTAT TGTCTGTACTACTATTATGCACGATCAGATATGTCTGGATTTATGCAGACATCATTCTTC TTCGGCTACATGGCTTGCATCTGCTATGCTTTCTTCCTGATGCTGGGCATGATCGGTTTC CGTGCCGCATTGTTCTTTGTCCGTCACATATACAAATCCATCAAGTGTGAGTAATACTGT TGTCAAAGGCTGGAGAGCAGCGGAGTTGTACTCCTTTTTGGTGCCACTAAGAAGTCCCAG TATAGAAAAGGTTAGCTCTCGCACAACAGGAGCAGCTAGAGATTGCCATGTTTCAGGTTA GGCCATTATTCATAGGAACAGGTAATGAACCTATAAATTTGTTCTCCTTTTGTGCGACTG CTGTGATAAATCGTCTTTTCTTTGGTCATGTAATTCTCCCTGTGATGTCTAGACATTTTC ACGTTGTTGATGCATGACCTACCTGAGCATCTCTGGAAGATCATGTCATGTCTTATTTCC TATAGCAGAATAACTGAAGTGTAGAGATGATGCCTCTAGAGCGGCTTGTCTATTTATACG TGTACCCACCGCTGGTTATGTATTGTCAAATATTGAAATACTGAACCATTCTTTTTTTTT C