Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0234100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7100048:7101570:1 gene:Os03g0234100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HB4 description:Similar to Non-symbiotic hemoglobin 4 (rHb4) (ORYsa GLB1d). (Os03t0234100-01)
Sequence

ATGGCTTTCGCGAGCGCAAGCAACGGGGCGGTCAGGTTCACCGAGGAGCAGGAGGCGCTG
GTGCTCAAGTCGTGGGCTATCATGAAGGACGATTCCGCCAACATCGGCCACCGCTTCTTC
TTGAAGATCTTCGAGGTCGCGCCGTCGGCTCGCCATCTGTTCTCGTTCCTGCGAAACTCC
GATGTGCCGCTCGAGAAGAACCCCAATCTCAAGAAACACGCCATGGCCGTCTTCGTCATG
ACGTGTGAGGCGGCTGCGCAGCTGCGGAAAACCGGGAGGGTCACCGTGAGGGACACCACC
ATCAAGAGGCTGGGCTCCACGCACTTCAAGAACGGCGTCTCCGACACCCACTTCGAGGTG
GCGAGGTTCGCGCTGCTTGAGACGATCAAAGATGGGATTCCGGCGAGCATGTGGAGCCCC
GAGATGAAAAACGCGTGGGGCGAAGCCTACGAGCACCTGGTTGCGGCCATCAAGGAGGGG
ATGAAGCCGGTCGCTCTGTTATAA

Peptide Sequence

PEP ID

Os03t0234100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7100048:7101570:1 gene:Os03g0234100 transcript:Os03t0234100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HB4 description:Similar to Non-symbiotic hemoglobin 4 (rHb4) (ORYsa GLB1d). (Os03t0234100-01)
Sequence

MAFASASNGAVRFTEEQEALVLKSWAIMKDDSANIGHRFFLKIFEVAPSARHLFSFLRNS
DVPLEKNPNLKKHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDTHFEV
ARFALLETIKDGIPASMWSPEMKNAWGEAYEHLVAAIKEGMKPVALL

Transcript Sequence

Transcript ID

Os03t0234100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7100048:7101570:1 gene:Os03g0234100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HB4 description:Similar to Non-symbiotic hemoglobin 4 (rHb4) (ORYsa GLB1d). (Os03t0234100-01)
Sequence

AGATAGCATAGCATCGATCCAGCAGTTGAGTTGCACTGAGCTCGATCGGGTTGATCTAGC
TGCGATCGAATCGATCACCTGTGAAATCAAAGCAGGAACTTGGTAGATCAGGATTCATTC
AGGAAGGCCATGGCTTTCGCGAGCGCAAGCAACGGGGCGGTCAGGTTCACCGAGGAGCAG
GAGGCGCTGGTGCTCAAGTCGTGGGCTATCATGAAGGACGATTCCGCCAACATCGGCCAC
CGCTTCTTCTTGAAGATCTTCGAGGTCGCGCCGTCGGCTCGCCATCTGTTCTCGTTCCTG
CGAAACTCCGATGTGCCGCTCGAGAAGAACCCCAATCTCAAGAAACACGCCATGGCCGTC
TTCGTCATGACGTGTGAGGCGGCTGCGCAGCTGCGGAAAACCGGGAGGGTCACCGTGAGG
GACACCACCATCAAGAGGCTGGGCTCCACGCACTTCAAGAACGGCGTCTCCGACACCCAC
TTCGAGGTGGCGAGGTTCGCGCTGCTTGAGACGATCAAAGATGGGATTCCGGCGAGCATG
TGGAGCCCCGAGATGAAAAACGCGTGGGGCGAAGCCTACGAGCACCTGGTTGCGGCCATC
AAGGAGGGGATGAAGCCGGTCGCTCTGTTATAAGCGTACTGCCTCAGCTTCATGCATGAT
TCTCCATCGACGTCCCGTGTAAATCAATTTAACTATTTGTCACTCTTATGATATGACAAT
TAACGATTTACCCCTCACTGTCTATAACATGTGGGTCCTCATGTGTCTATGACGTATGGG
TCTAGTGGTAAATCGTTAAGCACCATTCGTAAGAGTGACAAATAGTTGAAAGCCCATGTT
GATTTCGTTGCTTGATCGCCCATTCACTTTGTGCCATTTAATTTGCTCGTTTAATTTTTC
TGAGTGTGTCGGTGTGTACGTTACAATTGTTGTAAGCACGGCCTGATGTTTTGTTCTTGT
GATTCAACATAAATAAAGATGGTTTTCTTCTGTG