Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0233500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7074684:7078859:1 gene:Os03g0233500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os03t0233500-01)
Sequence	ATGGTGACCGACGCCGAGGAGGTCTCCCCGACGGCGTCCTCGTCGGAATTGGAGCAGGAG GACGATGACGATGACTGCTACCTGAGCGATCAGGAGGACGACGCCTTGGAGGAGTCCGTC CTCCAGGTGCTGGAGGACGAACGCGACGAGGATTGCCATTGGTCCTCCACCTCCGTGATC ACCAAGGAATCCCTCTTGGCGGCGCAGAGGGAGGATCTTAGGAAGGTGATGGAGTTGCTA GGGTTGAGAGAGCACCACGCGCGGACGCTGCTCATCCACTACAGGTGGGATGTCGAAAGG ATTTTCGAGCTGCTTGATCAGAAGGGGAGGGACAGGCTCTTCTCGGAGGCTGGTATCCCT CTCCAACCTGCTAATAATCCCGGCTCGCCCTCCTCAACGGAGGTAACCTGCAATGTTTGC TATGACGATGTGCCCCTCTCGGACGCCTCCAAGATGGACTGCGGCCACAACTACTGCAAT GAATGCTGGACAGGATATTTCATTGTGAAGATAAATGAGGGACAAAGCCGCCGTATCAAG TGCATGGCTCTGAAGTGCAATACTATCTGTGACGAAGCAATAGTTCGTAAGCTAGTAAAT GCAAAGCGGCCAGATATTGCAGAGCGCTTTGAAAGGTTCTTGTTGGAATCTTATATTGAG GACAATGATACAGTCAAGTGGTGCCCAAGCACACCGCATTGTGGAAATGCTATACGCGTC AAAGGTGATATTCACTGTGAGGTGGAATGTACATGTGGACGCCAGTTTTGTTTTAATTGC TCCTCAGAAGCACATTCACCATGTTCCTGTGTGATGTGGGAGCTCTGGATCAAGAAATGC CGTGACGAGTCAGAGACCGTGAATTGGATAACAGTAAATACTAAGCCCTGTCCCAAGTGC CACAAACCTGTTGAGAAGAACGGTGGCTGCAATCTGGTTGCATGTATATGTGGGCAAGCA TTCTGCTGGTTATGCGGTGGTGCTACTGGCAGAGATCACACATGGTCAAGTATTAGTGGC CACAGTTGTGGTCGATTCACTGAAGATCAGTCAAAGAAGACAGAGCAAGCTAGGAGAAAC CTTTATCGGTACATGCACTACCACAACAGATACAAAGCTCACACTGATTCTCTTAAGCAG GAAGCAAAGCTTAAGGGCGACATCCAGGGGAAGATTTCCATTTCTGAAAACAAGGATTCC AAGATAAAAGATTACTCTTGGGTGATAAATGGATTAAACAGACTTTTCAGGTCAAGGCGG GTTCTTTCATATTCTTATCCTTTTGCATTCTACATGTTTGGTGATGAGATTTTCAAGGAT GAGATGACTTCTGATGAAAGAGAACTAAAGCAAAACCTATTTGAGGACCAACAACAACAA TTAGAATTCAACGTTGAAAGACTATCTGGTTTCCTTGAGAGGGATTTTCAAAATTTTAGT GATGATGAGGTTATGGATACAATGAAGCATGTCATCAATCTTTCCAATGTGGTTGATAGA CTCTGCAAGCAAATGTATCAGTGCATTGAGAATGATTTGTTGTATCCACTGCGTACGCCT CATAATATTGCTCCATACAAATCCAAGGGCCTTGACAGGGCCTCAGAGCTCAATGTTTGT TGGGATTCTTCTGAACAAGGTTTGCAACCAATTAAATACAGTCAAGATGAACACAAGAGT CAGCCTGGTTTATCTGGTTCATCTATTTTTGGAAAGCGGCAACTTGGCTCAAGTTCTAAT AACAATGGGCGGCCTCACAAGCGAGAAAGAAATGATGCCCATGGTGGGGCTGCCCTTTTT GACCTCAATGTGCCAGCTGAAGTGGCAGACAAGATATGA

Peptide Sequence

PEP ID	Os03t0233500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7074684:7078859:1 gene:Os03g0233500 transcript:Os03t0233500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os03t0233500-01)
Sequence	MVTDAEEVSPTASSSELEQEDDDDDCYLSDQEDDALEESVLQVLEDERDEDCHWSSTSVI TKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGIP LQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIK CMALKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRV KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKC HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKKTEQARRN LYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYSWVINGLNRLFRSRR VLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNFS DDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELNVC WDSSEQGLQPIKYSQDEHKSQPGLSGSSIFGKRQLGSSSNNNGRPHKRERNDAHGGAALF DLNVPAEVADKI

Transcript Sequence

Transcript ID	Os03t0233500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7074684:7078859:1 gene:Os03g0233500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C6HC-type domain containing protein. (Os03t0233500-01)
Sequence	AAACCAGTCCCTCTTTCCGGCCGCACCACCACCGCCTCCCCTCCGTTTCCCCTCCCTCAC TTCCCCTTCCGCGACTGCGAGCTTCTCCGCCGCCGCCGCCGCCCCCAATCGCCCGCCGCC CCGCGCCGCGATTGCCCCTCCCGGTGCCCCTCCCGCAGGCGCCGCCGATTCCCCCGACCC GGGGAAGCCCCGGTTTGCCGCGAGCTGCGTCGCCGGTGGGGGTTTGATTTGGGGCTGATC CGATCGCCCCCCCCTAGATGGTGACCGACGCCGAGGAGGTCTCCCCGACGGCGTCCTCGT CGGAATTGGAGCAGGAGGACGATGACGATGACTGCTACCTGAGCGATCAGGAGGACGACG CCTTGGAGGAGTCCGTCCTCCAGGTGCTGGAGGACGAACGCGACGAGGATTGCCATTGGT CCTCCACCTCCGTGATCACCAAGGAATCCCTCTTGGCGGCGCAGAGGGAGGATCTTAGGA AGGTGATGGAGTTGCTAGGGTTGAGAGAGCACCACGCGCGGACGCTGCTCATCCACTACA GGTGGGATGTCGAAAGGATTTTCGAGCTGCTTGATCAGAAGGGGAGGGACAGGCTCTTCT CGGAGGCTGGTATCCCTCTCCAACCTGCTAATAATCCCGGCTCGCCCTCCTCAACGGAGG TAACCTGCAATGTTTGCTATGACGATGTGCCCCTCTCGGACGCCTCCAAGATGGACTGCG GCCACAACTACTGCAATGAATGCTGGACAGGATATTTCATTGTGAAGATAAATGAGGGAC AAAGCCGCCGTATCAAGTGCATGGCTCTGAAGTGCAATACTATCTGTGACGAAGCAATAG TTCGTAAGCTAGTAAATGCAAAGCGGCCAGATATTGCAGAGCGCTTTGAAAGGTTCTTGT TGGAATCTTATATTGAGGACAATGATACAGTCAAGTGGTGCCCAAGCACACCGCATTGTG GAAATGCTATACGCGTCAAAGGTGATATTCACTGTGAGGTGGAATGTACATGTGGACGCC AGTTTTGTTTTAATTGCTCCTCAGAAGCACATTCACCATGTTCCTGTGTGATGTGGGAGC TCTGGATCAAGAAATGCCGTGACGAGTCAGAGACCGTGAATTGGATAACAGTAAATACTA AGCCCTGTCCCAAGTGCCACAAACCTGTTGAGAAGAACGGTGGCTGCAATCTGGTTGCAT GTATATGTGGGCAAGCATTCTGCTGGTTATGCGGTGGTGCTACTGGCAGAGATCACACAT GGTCAAGTATTAGTGGCCACAGTTGTGGTCGATTCACTGAAGATCAGTCAAAGAAGACAG AGCAAGCTAGGAGAAACCTTTATCGGTACATGCACTACCACAACAGATACAAAGCTCACA CTGATTCTCTTAAGCAGGAAGCAAAGCTTAAGGGCGACATCCAGGGGAAGATTTCCATTT CTGAAAACAAGGATTCCAAGATAAAAGATTACTCTTGGGTGATAAATGGATTAAACAGAC TTTTCAGGTCAAGGCGGGTTCTTTCATATTCTTATCCTTTTGCATTCTACATGTTTGGTG ATGAGATTTTCAAGGATGAGATGACTTCTGATGAAAGAGAACTAAAGCAAAACCTATTTG AGGACCAACAACAACAATTAGAATTCAACGTTGAAAGACTATCTGGTTTCCTTGAGAGGG ATTTTCAAAATTTTAGTGATGATGAGGTTATGGATACAATGAAGCATGTCATCAATCTTT CCAATGTGGTTGATAGACTCTGCAAGCAAATGTATCAGTGCATTGAGAATGATTTGTTGT ATCCACTGCGTACGCCTCATAATATTGCTCCATACAAATCCAAGGGCCTTGACAGGGCCT CAGAGCTCAATGTTTGTTGGGATTCTTCTGAACAAGGTTTGCAACCAATTAAATACAGTC AAGATGAACACAAGAGTCAGCCTGGTTTATCTGGTTCATCTATTTTTGGAAAGCGGCAAC TTGGCTCAAGTTCTAATAACAATGGGCGGCCTCACAAGCGAGAAAGAAATGATGCCCATG GTGGGGCTGCCCTTTTTGACCTCAATGTGCCAGCTGAAGTGGCAGACAAGATATGAAACT TAAATAACTTACAGCACATTCCGTTGCAAGTGTACAGCTGACCCGGGCTTCTTCAGCTAC ATAAAGGAAAACTCTGCTCTTTTTTGTTGCGTTAGAGTGTCGACATGGCAAGTTTAAACG GGGGGCTATAATACCAACAATAGGGTAGCGTTCACTTATTCTCTTGTAAATCATGACAAG AATTGGTGGCAATGTGCAATGTGCACGTTGCATAGCTCTTATAATGCTAAATCTACCCCT CGGGCAAGACGATGGCATTTTGGAAGATAAAATTTTGAAATGTCCTTTTGCAAACATGCA AGGTAATGTATGAAGCATATTGGAAGTGCCTGCGGATGCGTAGCACCTGGAAATTAATAG AAACAAACTAATTGAGTCGCG