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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0232800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:7043812:7046128:-1 gene:Os03g0232800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-01);Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-02)
Sequence

ATGGATCTCCTCCGGCGAGTCGCCGTGGTAGCCGTGCTCCTGTCGCTGCCGTCGCGTGGC
CGCTCCGGCGGCGGCGGCAGCGATCTGCACCCGGTCGTGCTCGTGCCGGGGTACGGGTCC
AACCGGCTCTACGCGCGGCTGACTGCGGCGTACGAGCCGGCGGCGCCTCGCTGCGGCGCG
CGAGAGGGGAAGGATGAGTGGTTCCAGCTGTGGCCGATCGACGCGGCGGCGAGCGAACCC
GCCCAGGCCCCCTGCCTCGCCGAGAAGATGAGCCTCGTCTACGACCCCGTCGCCGACGAC
TACCGCAACGTCGCCGGCGTCGTCACCAGGGTCCCCTCCTTCGCCTCCACCCGCGCCTTG
GTTGGGTGGGACCCACTGGTGCGGCAGCTGGAGGCGATGGGCCACCGCGACGGCGGGAGC
CTCTTCGCCGCGCCCTACGACTTCCGCTACGCGGTGGCGCCGCGGGGCCACCCGTCGGCG
GTGGGCGAGCGCTACTTCGCTCGCCTCACGCGCCTCATCGAGAGGGCGAGCCGGCTCAAC
GGCGGGCGGCCTGCCGTCGTGGTGGCGCACAGCTTCGGCTGCGCGCTCACGTACCAGTTC
CTGCGCGCCCGCCCGCTCGCCTGGCGCCAACGCTTCGTCAAGCACGCCGTCCTCCTGGCC
GCCGCGCTCGGCGGCTTCGCGGAGGGGATGGACGGCCTCGCCTCCGGCGCCGGCTCCGGC
CTCCCCAACCTCGCGCCGCCGGCGAGGGCCAGGCTTGCGCGGAGCCAGCAGAGCGCGCTC
TGGCGCCTGCCGACGCCGATGGTGTTCGGTGACCGGCCGGTGGTGGTGACCAAGAACTCG
ACCTACTCCGCCAACAACATCACCGAGTTCCTCGACGCCATCGGCTTCACGGAAGGGGTC
CAGCCGTACGTGACACGGGTGCTGCCGATGTGGCGGGCGCTCCCGGCGCCGATGGTGCCG
GTGACAAGCATGTACGGGGTCGGTGTCAGGACGCCGGAGACGTTCGTCTACGGCGAAGCT
GGGTTCGAGGGGACACCGGAGGTGGTGTACGGCGACGGCGACGGGAACATGAACATTGTG
AGCCTGATGGCTGCGGAGGAGTGGTCTGGGGTGGAAGGCCAAATCTTGAAGGTGGTCAGG
TTGCCAGGTGTTAGTCACGTTGGCTTCTTCAGCGATCTTGCTCTCAAGAAAGTAGTTGCT
GAAATACAGAAGGCAGTTAGCAGCATAGAGGTACACAGGAAAGAGAAAATCTTCTCTTTT
CTGAATAATTTTGAATTTACAATTCCTGTGCCACTAGGATGGTGA

Peptide Sequence

PEP ID

Os03t0232800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:7043812:7046128:-1 gene:Os03g0232800 transcript:Os03t0232800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-01);Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-02)
Sequence

MDLLRRVAVVAVLLSLPSRGRSGGGGSDLHPVVLVPGYGSNRLYARLTAAYEPAAPRCGA
REGKDEWFQLWPIDAAASEPAQAPCLAEKMSLVYDPVADDYRNVAGVVTRVPSFASTRAL
VGWDPLVRQLEAMGHRDGGSLFAAPYDFRYAVAPRGHPSAVGERYFARLTRLIERASRLN
GGRPAVVVAHSFGCALTYQFLRARPLAWRQRFVKHAVLLAAALGGFAEGMDGLASGAGSG
LPNLAPPARARLARSQQSALWRLPTPMVFGDRPVVVTKNSTYSANNITEFLDAIGFTEGV
QPYVTRVLPMWRALPAPMVPVTSMYGVGVRTPETFVYGEAGFEGTPEVVYGDGDGNMNIV
SLMAAEEWSGVEGQILKVVRLPGVSHVGFFSDLALKKVVAEIQKAVSSIEVHRKEKIFSF
LNNFEFTIPVPLGW

Transcript Sequence

Transcript ID

Os03t0232800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7043812:7046128:-1 gene:Os03g0232800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-01);Similar to Lecithin:cholesterol acyltransferase family protein, expressed. (Os03t0232800-02)
Sequence

GCAACAAACGCACCCACACATGGATCTCCTCCGGCGAGTCGCCGTGGTAGCCGTGCTCCT
GTCGCTGCCGTCGCGTGGCCGCTCCGGCGGCGGCGGCAGCGATCTGCACCCGGTCGTGCT
CGTGCCGGGGTACGGGTCCAACCGGCTCTACGCGCGGCTGACTGCGGCGTACGAGCCGGC
GGCGCCTCGCTGCGGCGCGCGAGAGGGGAAGGATGAGTGGTTCCAGCTGTGGCCGATCGA
CGCGGCGGCGAGCGAACCCGCCCAGGCCCCCTGCCTCGCCGAGAAGATGAGCCTCGTCTA
CGACCCCGTCGCCGACGACTACCGCAACGTCGCCGGCGTCGTCACCAGGGTCCCCTCCTT
CGCCTCCACCCGCGCCTTGGTTGGGTGGGACCCACTGGTGCGGCAGCTGGAGGCGATGGG
CCACCGCGACGGCGGGAGCCTCTTCGCCGCGCCCTACGACTTCCGCTACGCGGTGGCGCC
GCGGGGCCACCCGTCGGCGGTGGGCGAGCGCTACTTCGCTCGCCTCACGCGCCTCATCGA
GAGGGCGAGCCGGCTCAACGGCGGGCGGCCTGCCGTCGTGGTGGCGCACAGCTTCGGCTG
CGCGCTCACGTACCAGTTCCTGCGCGCCCGCCCGCTCGCCTGGCGCCAACGCTTCGTCAA
GCACGCCGTCCTCCTGGCCGCCGCGCTCGGCGGCTTCGCGGAGGGGATGGACGGCCTCGC
CTCCGGCGCCGGCTCCGGCCTCCCCAACCTCGCGCCGCCGGCGAGGGCCAGGCTTGCGCG
GAGCCAGCAGAGCGCGCTCTGGCGCCTGCCGACGCCGATGGTGTTCGGTGACCGGCCGGT
GGTGGTGACCAAGAACTCGACCTACTCCGCCAACAACATCACCGAGTTCCTCGACGCCAT
CGGCTTCACGGAAGGGGTCCAGCCGTACGTGACACGGGTGCTGCCGATGTGGCGGGCGCT
CCCGGCGCCGATGGTGCCGGTGACAAGCATGTACGGGGTCGGTGTCAGGACGCCGGAGAC
GTTCGTCTACGGCGAAGCTGGGTTCGAGGGGACACCGGAGGTGGTGTACGGCGACGGCGA
CGGGAACATGAACATTGTGAGCCTGATGGCTGCGGAGGAGTGGTCTGGGGTGGAAGGCCA
AATCTTGAAGGTGGTCAGGTTGCCAGGTGTTAGTCACGTTGGCTTCTTCAGCGATCTTGC
TCTCAAGAAAGTAGTTGCTGAAATACAGAAGGCAGTTAGCAGCATAGAGGTACACAGGAA
AGAGAAAATCTTCTCTTTTCTGAATAATTTTGAATTTACAATTCCTGTGCCACTAGGATG
GTGATGTCCATATGTCATTACTGATCCGTGCAAATAAATAATAGCAATAATTTTGGCTGC
TGT