Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0228800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6804619:6808346:-1 gene:Os03g0228800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRK1 protein. (Os03t0228800-01)
Sequence	ATGGCACTGGCTGGCTCCATGGCCGCCGCCGCCGCCACCTCCACCCTTCTCCTCCTCCTC CTCCTCCTCCTCCTCGCCACCGCCACCCATGGCGCCGCGGCCGACACAGTCTCGTCCCCC GCCTCCCCTGAAGCGGCCGCACTCCTCAACCTCTCCGCCGCGCTCGGTGATCCCTCGGGC TACCTCTCCACGCACTGGACGCACGACACCGCGTTCTGCTCGTGGCCGCGCCTCTCCTGC GACGCCGACGGCTCCCGCGTCCTCTCGCTCGACCTCTCCGGCCTCAACCTCTCCGGCCCG ATCCCCGCCGCGGCGCTCTCCTCCCTCTCGCACCTCCAGTCACTCAACCTCTCCAACAAC ATCCTCAACTCCACCTTCCCGGAGGGCCTCATCGCCAGCCTCAAGAACCTTCGCGTTCTC GATTTCTACAACAACAACCTCACCGGCGCTCTCCCGGCCGCGCTCCCCAACCTCACCAAC CTTGTTCACCTCCACCTCGGCGGCAATTTCTTCTTCGGCAGCATCCCCAGGTCGTACGGG CAGTGGAGCCGGATCAAGTACCTGGCTCTCTCCGGCAATGAGCTCACCGGGGAGATACCG CCGGAGCTCGGCAACCTGACGACGCTCAGGGAACTGTACCTCGGCTACTTCAACAGCTTC ACCGGCGGGATACCGCCGGAGCTCGGGAGGCTGAAGGAGCTCGTGCGGCTCGACATGGCG AACTGCGGGATCTCCGGTGTGGTCCCGCCGGAGGTGGCGAACCTGACGTCGCTCGACACT CTGTTTCTTCAGATCAACGCTCTCTCCGGGCGGCTGCCGCCGGAGATTGGCGCAATGGGG GCGCTGAAATCGCTCGACCTGTCGAACAACCTGTTCGTCGGGGAGATCCCCGCGAGCTTC GCGTCGCTCAAGAACCTGACGCTGCTGAACCTCTTCCGGAATCGCCTCGCCGGCGAGATT CCCGAGTTTGTCGGCGACCTGCCGAACCTCGAGGTGCTGCAGCTGTGGGAGAACAACTTC ACCGGTGGAGTGCCGGCTCAGCTCGGCGTGGCAGCCACCAGGCTGAGGATCGTCGATGTG AGCACGAACAGGCTAACCGGCGTTCTACCAACAGAGCTCTGCGCCGGCAAGCGGCTGGAG ACGTTCATTGCGCTGGGGAACTCACTGTTCGGCAGCATTCCCGACGGGCTCGCCGGGTGC CCGTCGTTGACGAGGCTTCGTCTTGGAGAGAATTATCTGAACGGGACGATACCGGCGAAG ATGTTTACATTGCAGAACCTGACGCAGATCGAGCTGCACGATAATTTGCTCTCCGGCGAG CTCCGGCTGGACGCCGGCGTGGTGTCACCATCAATAGGAGAGCTGAGCTTGTATAACAAT CGGTTGTCCGGTCCGGTGCCGGTGGGGATCGGTGGTCTCGTCGGGCTGCAGAAGTTGCTG GTCGCCGGGAACCGGTTGTCCGGCGAACTCCCTCGTGAGATTGGGAAGCTGCAACAGCTT TCAAAGGCGGACTTATCTGGGAACCTGATCTCCGGGGAGATACCTCCGGCGATCGCCGGA TGCCGGCTGCTCACCTTCCTCGACCTCTCTGGCAACAGGCTCTCCGGCAGAATCCCGCCG GCGCTCGCCGGGCTACGAATCCTCAACTATCTCAATCTGTCCCACAACGCGCTCGACGGG GAGATTCCACCTGCTATCGCCGGAATGCAGAGCCTAACAGCCGTCGACTTCTCCGACAAC AATCTCTCCGGCGAGGTCCCGGCGACCGGCCAGTTCGCCTACTTCAACGCCACGTCGTTC GCCGGTAACCCAGGCCTCTGCGGCGCCTTCCTCTCCCCGTGCCGCTCCCACGGCGTCGCC ACGACGTCGACCTTCGGCTCCCTCTCGTCGGCGTCGAAGCTGCTCCTCGTGCTCGGCCTC CTCGCGCTGTCCATCGTGTTCGCCGGCGCGGCGGTGCTGAAGGCGCGGTCGCTGAAGCGG TCCGCCGAGGCGCGCGCGTGGCGGCTCACGGCGTTCCAGCGCCTCGACTTCGCCGTGGAC GACGTGCTGGACTGCCTCAAGGAGGAGAACGTGATCGGCAAGGGCGGGTCAGGGATCGTG TACAAGGGCGCGATGCCCGGCGGCGCGGTGGTGGCCGTGAAGCGGCTCCCGGCCATGGGG CGCTCCGGCGCGGCGCACGACGACTACGGCTTCTCGGCGGAGATACAGACGCTGGGGCGC ATCCGGCACCGACACATCGTGCGCCTGCTCGGGTTCGCCGCCAACCGGGAGACGAACCTG CTGGTGTACGAGTACATGCCGAACGGCAGCCTCGGCGAGGTGCTCCACGGCAAGAAGGGC GGCCACCTGCAGTGGGCGACGCGGTACAAGATCGCCGTGGAGGCCGCCAAGGGCCTCTGC TACCTGCACCACGACTGCTCGCCGCCGATCCTGCACCGCGACGTCAAGTCCAACAACATC CTCCTCGACGCCGAGTTCGAGGCGCACGTCGCCGACTTCGGCCTCGCCAAGTTCCTCCGC GGCAATGCCGGTGGCTCCGAGTGCATGTCCGCGATCGCCGGCTCCTACGGCTACATTGCT CCCGAGTACGCCTACACGCTCAAGGTGGACGAGAAGAGCGACGTGTACAGCTTCGGGGTA GTGCTACTGGAGCTCATCGCTGGGCGGAAGCCGGTGGGAGAGTTCGGCGACGGCGTGGAC ATCGTGCACTGGGTGCGGATGGTGACCGGGTCGAGCAAGGAGGGCGTCACGAAGATCGCC GACCCACGGCTCTCGACGGTGCCCCTCCACGAGCTGACGCACGTCTTCTACGTCGCCATG CTGTGCGTCGCCGAGCAGAGCGTCGAGCGGCCGACGATGCGGGAGGTCGTGCAGATCTTG ACCGACCTGCCCGGTACGGCGGCGGCGACGGCCATGGACGCGCCGTCGCACGGGTCGGGG AAAGAGCAAGACCGGAGCGCGGAGATGCAGCAGCAGGACGGGTCACGCGAGTCCCCGCCA CAGCAGGATCTCCTTAGCATCTAG

Peptide Sequence

PEP ID	Os03t0228800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6804619:6808346:-1 gene:Os03g0228800 transcript:Os03t0228800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRK1 protein. (Os03t0228800-01)
Sequence	MALAGSMAAAAATSTLLLLLLLLLLATATHGAAADTVSSPASPEAAALLNLSAALGDPSG YLSTHWTHDTAFCSWPRLSCDADGSRVLSLDLSGLNLSGPIPAAALSSLSHLQSLNLSNN ILNSTFPEGLIASLKNLRVLDFYNNNLTGALPAALPNLTNLVHLHLGGNFFFGSIPRSYG QWSRIKYLALSGNELTGEIPPELGNLTTLRELYLGYFNSFTGGIPPELGRLKELVRLDMA NCGISGVVPPEVANLTSLDTLFLQINALSGRLPPEIGAMGALKSLDLSNNLFVGEIPASF ASLKNLTLLNLFRNRLAGEIPEFVGDLPNLEVLQLWENNFTGGVPAQLGVAATRLRIVDV STNRLTGVLPTELCAGKRLETFIALGNSLFGSIPDGLAGCPSLTRLRLGENYLNGTIPAK MFTLQNLTQIELHDNLLSGELRLDAGVVSPSIGELSLYNNRLSGPVPVGIGGLVGLQKLL VAGNRLSGELPREIGKLQQLSKADLSGNLISGEIPPAIAGCRLLTFLDLSGNRLSGRIPP ALAGLRILNYLNLSHNALDGEIPPAIAGMQSLTAVDFSDNNLSGEVPATGQFAYFNATSF AGNPGLCGAFLSPCRSHGVATTSTFGSLSSASKLLLVLGLLALSIVFAGAAVLKARSLKR SAEARAWRLTAFQRLDFAVDDVLDCLKEENVIGKGGSGIVYKGAMPGGAVVAVKRLPAMG RSGAAHDDYGFSAEIQTLGRIRHRHIVRLLGFAANRETNLLVYEYMPNGSLGEVLHGKKG GHLQWATRYKIAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDAEFEAHVADFGLAKFLR GNAGGSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGEFGDGVD IVHWVRMVTGSSKEGVTKIADPRLSTVPLHELTHVFYVAMLCVAEQSVERPTMREVVQIL TDLPGTAAATAMDAPSHGSGKEQDRSAEMQQQDGSRESPPQQDLLSI

Transcript Sequence

Transcript ID	Os03t0228800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6804619:6808346:-1 gene:Os03g0228800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRK1 protein. (Os03t0228800-01)
Sequence	GGACACCCACTCCGCCACCGCCACCGCCTCATCCATGGCACTGGCTGGCTCCATGGCCGC CGCCGCCGCCACCTCCACCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCACCGCCAC CCATGGCGCCGCGGCCGACACAGTCTCGTCCCCCGCCTCCCCTGAAGCGGCCGCACTCCT CAACCTCTCCGCCGCGCTCGGTGATCCCTCGGGCTACCTCTCCACGCACTGGACGCACGA CACCGCGTTCTGCTCGTGGCCGCGCCTCTCCTGCGACGCCGACGGCTCCCGCGTCCTCTC GCTCGACCTCTCCGGCCTCAACCTCTCCGGCCCGATCCCCGCCGCGGCGCTCTCCTCCCT CTCGCACCTCCAGTCACTCAACCTCTCCAACAACATCCTCAACTCCACCTTCCCGGAGGG CCTCATCGCCAGCCTCAAGAACCTTCGCGTTCTCGATTTCTACAACAACAACCTCACCGG CGCTCTCCCGGCCGCGCTCCCCAACCTCACCAACCTTGTTCACCTCCACCTCGGCGGCAA TTTCTTCTTCGGCAGCATCCCCAGGTCGTACGGGCAGTGGAGCCGGATCAAGTACCTGGC TCTCTCCGGCAATGAGCTCACCGGGGAGATACCGCCGGAGCTCGGCAACCTGACGACGCT CAGGGAACTGTACCTCGGCTACTTCAACAGCTTCACCGGCGGGATACCGCCGGAGCTCGG GAGGCTGAAGGAGCTCGTGCGGCTCGACATGGCGAACTGCGGGATCTCCGGTGTGGTCCC GCCGGAGGTGGCGAACCTGACGTCGCTCGACACTCTGTTTCTTCAGATCAACGCTCTCTC CGGGCGGCTGCCGCCGGAGATTGGCGCAATGGGGGCGCTGAAATCGCTCGACCTGTCGAA CAACCTGTTCGTCGGGGAGATCCCCGCGAGCTTCGCGTCGCTCAAGAACCTGACGCTGCT GAACCTCTTCCGGAATCGCCTCGCCGGCGAGATTCCCGAGTTTGTCGGCGACCTGCCGAA CCTCGAGGTGCTGCAGCTGTGGGAGAACAACTTCACCGGTGGAGTGCCGGCTCAGCTCGG CGTGGCAGCCACCAGGCTGAGGATCGTCGATGTGAGCACGAACAGGCTAACCGGCGTTCT ACCAACAGAGCTCTGCGCCGGCAAGCGGCTGGAGACGTTCATTGCGCTGGGGAACTCACT GTTCGGCAGCATTCCCGACGGGCTCGCCGGGTGCCCGTCGTTGACGAGGCTTCGTCTTGG AGAGAATTATCTGAACGGGACGATACCGGCGAAGATGTTTACATTGCAGAACCTGACGCA GATCGAGCTGCACGATAATTTGCTCTCCGGCGAGCTCCGGCTGGACGCCGGCGTGGTGTC ACCATCAATAGGAGAGCTGAGCTTGTATAACAATCGGTTGTCCGGTCCGGTGCCGGTGGG GATCGGTGGTCTCGTCGGGCTGCAGAAGTTGCTGGTCGCCGGGAACCGGTTGTCCGGCGA ACTCCCTCGTGAGATTGGGAAGCTGCAACAGCTTTCAAAGGCGGACTTATCTGGGAACCT GATCTCCGGGGAGATACCTCCGGCGATCGCCGGATGCCGGCTGCTCACCTTCCTCGACCT CTCTGGCAACAGGCTCTCCGGCAGAATCCCGCCGGCGCTCGCCGGGCTACGAATCCTCAA CTATCTCAATCTGTCCCACAACGCGCTCGACGGGGAGATTCCACCTGCTATCGCCGGAAT GCAGAGCCTAACAGCCGTCGACTTCTCCGACAACAATCTCTCCGGCGAGGTCCCGGCGAC CGGCCAGTTCGCCTACTTCAACGCCACGTCGTTCGCCGGTAACCCAGGCCTCTGCGGCGC CTTCCTCTCCCCGTGCCGCTCCCACGGCGTCGCCACGACGTCGACCTTCGGCTCCCTCTC GTCGGCGTCGAAGCTGCTCCTCGTGCTCGGCCTCCTCGCGCTGTCCATCGTGTTCGCCGG CGCGGCGGTGCTGAAGGCGCGGTCGCTGAAGCGGTCCGCCGAGGCGCGCGCGTGGCGGCT CACGGCGTTCCAGCGCCTCGACTTCGCCGTGGACGACGTGCTGGACTGCCTCAAGGAGGA GAACGTGATCGGCAAGGGCGGGTCAGGGATCGTGTACAAGGGCGCGATGCCCGGCGGCGC GGTGGTGGCCGTGAAGCGGCTCCCGGCCATGGGGCGCTCCGGCGCGGCGCACGACGACTA CGGCTTCTCGGCGGAGATACAGACGCTGGGGCGCATCCGGCACCGACACATCGTGCGCCT GCTCGGGTTCGCCGCCAACCGGGAGACGAACCTGCTGGTGTACGAGTACATGCCGAACGG CAGCCTCGGCGAGGTGCTCCACGGCAAGAAGGGCGGCCACCTGCAGTGGGCGACGCGGTA CAAGATCGCCGTGGAGGCCGCCAAGGGCCTCTGCTACCTGCACCACGACTGCTCGCCGCC GATCCTGCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACGCCGAGTTCGAGGCGCA CGTCGCCGACTTCGGCCTCGCCAAGTTCCTCCGCGGCAATGCCGGTGGCTCCGAGTGCAT GTCCGCGATCGCCGGCTCCTACGGCTACATTGCTCCCGAGTACGCCTACACGCTCAAGGT GGACGAGAAGAGCGACGTGTACAGCTTCGGGGTAGTGCTACTGGAGCTCATCGCTGGGCG GAAGCCGGTGGGAGAGTTCGGCGACGGCGTGGACATCGTGCACTGGGTGCGGATGGTGAC CGGGTCGAGCAAGGAGGGCGTCACGAAGATCGCCGACCCACGGCTCTCGACGGTGCCCCT CCACGAGCTGACGCACGTCTTCTACGTCGCCATGCTGTGCGTCGCCGAGCAGAGCGTCGA GCGGCCGACGATGCGGGAGGTCGTGCAGATCTTGACCGACCTGCCCGGTACGGCGGCGGC GACGGCCATGGACGCGCCGTCGCACGGGTCGGGGAAAGAGCAAGACCGGAGCGCGGAGAT GCAGCAGCAGGACGGGTCACGCGAGTCCCCGCCACAGCAGGATCTCCTTAGCATCTAGAA GCGTGCGTGCATGTCCCCGTTGTACCGGTACTCCGTAGCATCATCCCCTGTACGTCTTGG CGTACTCCTGGACTGTGCTGGTGTCCTGGACTGTGCTGGTGTCCGGGTCCGAGTCCAAGT AGAGGCAAATCTCCAATATTTGCGGTAGTATTGTTAGCTAGATTAAGATTATATTGTTAC ATAATGGTGGTTGATAAAATCTACTACTAGTAGTATGTAATCTGTCTCCTCTCGTGTACA AAGCAACTACTCCT