Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0228500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:6786712:6790137:1 gene:Os03g0228500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0228500-01)
Sequence

ATGAGCGATCTCCGCGAACTCGGCATGCGGCGGGAGCCGTCGAGGGCTGAGGTGGTGGGG
CGTGCCAAGGACGACGGGGACTTCGACGCGCTCCGCCGCGCCATCATCCGCAAGGTCAAG
GACAACGAGGTGCTACGCAGCAACATAATTGCAGAGGTGAAGCAGTCAGTGGTAATAAAT
GAAGATGGCTCTGAAAAGTTAAAGCTGAAAGATCTTTCTGATGCGATTTACCAAGATATC
GGGAGCAAAATAATGGGTCAAATCTCAGACGAGATATGGGGTGTCATCCTATCAAATGAA
ATTGATATCCGAGGAACTTCTGAAACTGTCTACAATAGAATGATGAACCCTGAGCAGCAG
CAGGACCCTCCTTCAAAGAAACTGAAGAGGAATGCCAAAGAGGAGCAAGTGTCCCCAGCA
AAAGCATCAACTTCTGTTGCAGTCCAGCTGGAAGATGATGATCCAGAGGAACCACCAGGA
TTTGGTTTCAGTGATCATCAGCGCAGCAACATCATGGCAACTCAGCAGCAGCAGTCGTCA
AATACTGAGAATCATAACCAAGTGAAACCAAATGAAGGTGAGCCCAACGCCGTTAGCTGC
CCTGGGGATGATGATGAGGAGGATCCTGATGTGCCTCCTGGGTTTGGTTAA

Peptide Sequence

PEP ID

Os03t0228500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:6786712:6790137:1 gene:Os03g0228500 transcript:Os03t0228500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0228500-01)
Sequence

MSDLRELGMRREPSRAEVVGRAKDDGDFDALRRAIIRKVKDNEVLRSNIIAEVKQSVVIN
EDGSEKLKLKDLSDAIYQDIGSKIMGQISDEIWGVILSNEIDIRGTSETVYNRMMNPEQQ
QDPPSKKLKRNAKEEQVSPAKASTSVAVQLEDDDPEEPPGFGFSDHQRSNIMATQQQQSS
NTENHNQVKPNEGEPNAVSCPGDDDEEDPDVPPGFG

Transcript Sequence

Transcript ID

Os03t0228500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:6786712:6790137:1 gene:Os03g0228500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0228500-01)
Sequence

TCCTCTCGCCTCTCGCTCTCTCCGACGAAACCCCAAAATTTTCTGAGGGAAGCAAGCGGC
GGCGCACGGAGTCCCCTCCCTCCCCAATCTGCAACGAACTCGAAGGGCGGCGGCGGCGGC
GTACGCCGGTGAATCAGGTTCCCGCGGCGGAGCCGTGCTCCACCCCCGCGCTCCCATGAG
CGATCTCCGCGAACTCGGCATGCGGCGGGAGCCGTCGAGGGCTGAGGTGGTGGGGCGTGC
CAAGGACGACGGGGACTTCGACGCGCTCCGCCGCGCCATCATCCGCAAGGTCAAGGACAA
CGAGGTGCTACGCAGCAACATAATTGCAGAGGTGAAGCAGTCAGTGGTAATAAATGAAGA
TGGCTCTGAAAAGTTAAAGCTGAAAGATCTTTCTGATGCGATTTACCAAGATATCGGGAG
CAAAATAATGGGTCAAATCTCAGACGAGATATGGGGTGTCATCCTATCAAATGAAATTGA
TATCCGAGGAACTTCTGAAACTGTCTACAATAGAATGATGAACCCTGAGCAGCAGCAGGA
CCCTCCTTCAAAGAAACTGAAGAGGAATGCCAAAGAGGAGCAAGTGTCCCCAGCAAAAGC
ATCAACTTCTGTTGCAGTCCAGCTGGAAGATGATGATCCAGAGGAACCACCAGGATTTGG
TTTCAGTGATCATCAGCGCAGCAACATCATGGCAACTCAGCAGCAGCAGTCGTCAAATAC
TGAGAATCATAACCAAGTGAAACCAAATGAAGGTGAGCCCAACGCCGTTAGCTGCCCTGG
GGATGATGATGAGGAGGATCCTGATGTGCCTCCTGGGTTTGGTTAACATCCTGCAATCTT
CTATTGTGGTGTGATCTGTGATGTTTCTTGTCAACACTAAGAAAAATGATTTAGTTTACA
TTTGCTGCTCGAGGGGTTCATTTGAATATTGAATCATGAAACCGATATGATTGGGATGAG
TTCATGTTGCTCCTAGCTTCAGCCTCTTATTTATGAGGGAACAAATGGGCATTTAAGCGA
TC