Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0227500-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:6716431:6720052:1 gene:Os03g0227500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0227500-01);Conserved hypothetical protein. (Os03t0227500-02)
Sequence

ATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCTATCTTG
TTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGACTTTCA
GCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATAGA
AGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGA

Peptide Sequence

PEP ID

Os03t0227500-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:6716431:6720052:1 gene:Os03g0227500 transcript:Os03t0227500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0227500-01);Conserved hypothetical protein. (Os03t0227500-02)
Sequence

IHDPLCCRRDLKVALFYAILFCFVMVSCYVALYLRWFRLSAIFVVFGILLPVGLKISRHR
RLKRKRERRLLLPLSM

Transcript Sequence

Transcript ID

Os03t0227500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:6716431:6720052:1 gene:Os03g0227500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0227500-01);Conserved hypothetical protein. (Os03t0227500-02)
Sequence

GTTCTTCTCTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAAT
CGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGA
GAGCACCAGATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGC
CCTCACATCGCCTCCAGGTAAAGGTCCCTCATCTTCTTGTTCCTGCTAAGATCTGATGCG
ACGCTGCTACAAACATGATGCGGTTAGGGCTTTTAGTTGGATTGCCCTGATTTTGGTGGT
CTCCCTAGATTCAGTGTAATGATCAAAATCAGATTCGTCTCCCTAGATTCAGTGTAATGG
TCTCCCTAGATTGGCTTATTCTTTGTTTTGCTTCCTTGATCATATGGGTATTGGATGATC
TGTGTGAATAGTGGCAGTATTTTGTTTTTTGGTTAATTTCTGGTTGTAGCAGTGCACAAC
AAGAAGGGATTTTAGTCTCCTTTATTTGGGACTAAGTATGTGATATGGTTTGAGTAGGTA
GAAATTCACAGTATGATATTAATAACTTCATGACTAATTATTAGCTGTGCACTCAATTGA
CGGCGCAATGTCTTGTGAAAATTAGAATTTCGAGGTCTCTACTAAGAGATCTTTTTTGAC
TTTTGTTTGAGACTAGGATTGTTAAAAAGCTCGGCCATACAATATCTATTCGATGGCAAG
GTGTTGGATATATGATCTGAAGGGGCTCTAAGATAAGGCCCTCTTCTGTTTGTATGTGGG
TGCTACTCAGCAATAGTCAAGACAATAGCATAGCTGTTGTGTTTTATTAGTATATTTGGA
TAAAACAACTTAATTATGCAACTTTTCATCTATTCCCATGATCATAGTCAACGGAGTACT
AGAACAAACAACTGCATTCATGAATAATGATGCAAGCTATGGTGTCTTCACTTTTGTCAG
TAGCTGAATACAACAATTTGTGAAGGAACTAAGGAAAAGAAAGGGGAACTGAATACTGTC
AGCTAGTTGTAGTTTCCTATACCTGAGCAAAACTCATGCCTGCAGTGCATCGAGACTGTT
TCATTTAAGCAACCTGGTGTTGGTCCAGGTTTGACAAAATTACCCAAAGCAATAGTGTTT
GGTTGCTAACAGGCCTCACACTTAGTCACTTAAGAACCTGTCCTATCCCTAAACCTGGTC
AAGCCCTGCCAACTTGCCAAGCCCACCTACCTTGGCCAGGCCAACCTCAGTTTGCTCAAG
TTTAATTTTTACAACTTATCCAGTTATCCCTAGACTCAGGAATATGCCTAGCAAGTGGCA
AGCACTGCATAAGTTTAGCACTTTATCCATTATATGCACTGCAGTGTAATGGAGAGGTGG
CTAAGATGATATGGGATGTCCTCATGTCCATGTATGTAACCCATGTTTTAAGTTTGTTGA
TCACACCAATTCATGGCTTGCCATTTCATGCTTCAAGAGACTTGGATTGTCTGCATGGCA
TGGCGTGCCAGTTGGAAGGCTTATATGACAGCCAATGGCTAATTGATGGATTAATAAAGT
GAATCTCATTGTCTGTTTAGGGCCTGTCCGAAAATAAATTATAGTTGAAGGAGCTAAGCA
GGAATAAATAGGTCACTACAACTGATGCGAATAGACAGGCTTGGTCCAGTTGGTACTTAG
TAGTAACATTTCTATTAAAGAAAAGATTGGCCATTTATTTTTTTCTGTTTTTTTGTTTGT
TCTATTTTTTGGTTTAGTTTTCATTGGCTAAACCATCATATTTCTTTAGTACTACAAAAA
GAACGACTCACGATTTTCCAAAGTTCAACATCAAGTCCATCACTTGAGTTGTGGCCTTAC
AAACAATATACCATAAGATAAACCTGCGACCTTGAAGAACCTTTAAAAAATGGTGCTTTG
TGTTAGGGTTTAGGACTTATGATGAAAAGTTCATAGTAGAGATAGTATGTTTATGTTTAT
AATTTTGAACAGAGTCTTTTTTACCCACTATTTGTTACATCTATTATCTATTATGCCAGA
AACTTGCTTTTATTTATCTTGCAAGATGGGCAGCTTCCCTTTCTCATACGAAGAGGCAGT
CATGAAAATGTTGCAGTGAATATTTGAATTTAGCTGTAATGCTTTATACATGCTTCTGCA
TAAATGTGTATATAAAATATAGTGGATGCCAGACTTATAGGAGCAAGCGAATGTTGCTTT
AAACTGTTTTCACGAACACTTTACTGTGTAGTCTACAGTGTTCTGTAAACGGGTCTACTA
GGCTGTTTATTAGGCTACATAAAGGGAACTGATGCTCATAACTGTCGGGTTGCCAGTGAG
ACTACAGTCCAGCTAAGCCATATTAACACTACTAGGTAGGTGACCAATACGAGGAAGGTG
ACTGAATGAAAACCGGTTACTGATTTTTAGAAACTAGGCAATCTACTTTGTTGTGTACTC
TGTTTTCTGATTATATGTATTTACTTAATGTTGTCTAAGCAAAACCTATTGGCCAGTGAA
TCATCTTATATTTTCCATGCAGCATTGCTGTCATTTTATACATGACTGATGACACTTGTG
GTACTGAATTAAGGCTTGTAACTGTCTTCAAAATATTTAGTTGTAGTGCTAACATAAACT
ATGCTTTGTGTTGGACCCCTACAAACCTATTTTGTTTGATTCCCTACAGTCTGCATCCAA
AGTAATTGTAACTATTGAAACTAAAAGACAAATTGATAATGAATGCCTTCGATTTTCATT
GCAACAGAGGATTTTCATTCTATCATAGAATTCACTATCCTGAATTGTACTACTTCCGCC
CCGTAATATAAGGGATTTTGGAGACTTATATTATGGGACGGAGGGAGTATTATATTAGGC
AATTTTGTGACATACTTAGCTTGTGCTGGAGTGAATAAAGGAAACATCGAGTTTATAGTG
AACACAATGTGCTCATTTTTCCAATTGAATGCGATAGTCCTGAAATTGTTCATACCCTTT
CTCAGAGTTAAGAACTAGCAAACTGAATGTAGCATGGTTAATGCAAATGAGCTCTTAGTA
TTTGCAATCTGGAAATCCTTGTTGATTTTTTAAAGTCTAAACTACTATATAGAAAGTATC
TTGCTTGTCTATAATGAAACTGATAGAGGAAATACTATAGCTTGTGAAAATGAGCTTTAG
GTAGGTATTCGCAACTGGAATTCCTAGGTGATTTTCATTTCGGTAGGCCGGTAGCACAAT
ATATAATCTGTTGGTTGTTGCTATCCTGCTTCTGCTTCTGTTTTGACTTCTGAGGCCTTT
GTTATTGCTCTTAAATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCT
TCTATGCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGAT
GGTTCAGACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAA
TATCTAGGCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCA
TGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGA
AATTGCCTGCTTTACTTAATTT