Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0227000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6676410:6683840:1 gene:Os03g0227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP). (Os03t0227000-01)
Sequence	ATGCCTCGCTCCCTCGCCGGCGACCTCACCGATCCGGAGATGGCGCAGCCGTACATGAAG AAGGATGACGACGACGAGGACGTTGAGTACTCGCCATTTTATGGGATTGAGAAGGGAGCC GTTCTGCAGGAGGCAAGGGCTTTCCATGATCCGCAGCTTGATGCCAGGAAGTGCTCGCAA GTCATCACTAAGCTATTGTATTTACTCAACCAAGGGGAGACATTCACAAAGGTTGAGGCC ACAGAAGTTTTCTTTGCAGTAACAAAGCTGTTCCAGTCCAAGGATGCTGGTCTTAGGCGG CTGGTGTATTTAATGATCAAAGAGCTTTCACCATCATCAGATGAGGTTATCATAGTCACA AGCTCATTAATGAAAGATATGAACAGCAAGACGGATATGTACCGTGCCAATGCTATCAGA GTTCTGTGTAGAATAATTGATGGCACCCTCCTTACTCAAATTGAGAGATATTTGAAACAA GCTATAGTTGATAAGAATCCTGTGGTTGCTAGTGCTGCTCTTGTTAGTGGCATCCATCTG CTTCAGGCAAATCCAGAAATCGTGAAAAGATGGAGCAACGAAGTGCAGGAAGCTGTTCAA TCAAGATTTGCACTTGTGCAATTTCATGGCCTAGCTCTTCTTCACCAGATCAGACAGAAT GATCGTTTAGCTATTAGCAAGATGGTTTCTGGCTTGACTAGGGGGTCTGTCCGCTCACCT CTTGCACAATGTCTTCTGATTCGTTACACGAGCCAGGTAATACGCGAGTCAAGCATGAAC ACACAAACCAGTGATCGCCCATTTTTTGATTATCTGGAATCATGTTTGAGACATAAATCA GAAATGGTGATTCTAGAGGCTGCACGGAAAATAGCAGAGATGGATGTGACAAGTCGTGAA TTAGCACCAGCGATTACTGTGTTACAGTTATTTTTGAGTTCATCCAAACCTGTCCTTCGA TTTGCTGCTGTCCGGACACTCAACAAGGTTGCTATGACACGCCCTTTGGCAGTGACAAAC TGCAATGTGGACTTGGAAAGTCTGATGTCGGACCAGAATAGGAGTATAGCAACCCTGGCA ATCACTACACTTCTTAAAACAGGCAATGAATCTAGCGTAGACCGCCTCATGAAACAAATT ACCAATTTCATGTCAGACATAGCAGATGAATTCAAGATAGTTGTTGTTGAAGCTATACGA TCTCTATGCCTTAAGTTTCCCCTGAAGTATCGTTCAATGATGAACTTCTTGAGTAACAGT TTGAGAGAAGAAGGGGGCTTTGAGTACAAAAAGGCCATCGTTGATTCCATAGTAACTCTT ATCAGTGAGATACCAGATGCTAAAGAAATTGGTCTTTTGTATCTCTGTGAGTTCATTGAA GACTGTGAGTTCACCTATCTTTCCAGTCAGATATTGCATCTTTTGGGAAATGAAGGACCA AGGACATCAGATCCAAGCAGATATATACGCTACATCTACAACCGTGTGATACTGGAAAAT GCCACTGTCCGTGCTAGTGCTGTCAGTACATTGGCAAAGTTTGGTGCCTTAGTTGATGCC TTGAAGCCTAGGATCTTTGTTCTTTTGCGTCGTTGCCTGTTTGACACCGATGATGAGGTT CGTGACCGTGCTACACTTTATCTCCAAACTCTTGATGGTGAAGTTGCTGTTGGTAGCACT GAGAAGGATGTTAAGGAGTTCCTATTTGGATCATTTGATGTGCCACTTGCCAACTTGGAA GCAAGTCTTAAAACCTATGAACCCTCTGAGGAGCCTTTTGATATTTCTTTGGTGTCGAGA GAAGTCAAATCACAACCACTTCAAGAGAAAAAGGCCCCAGGAAAGAAGCCACCTGCTGGT GCTCCTGCTCCTGCACCTGTTCCAGCTGTTGATGCTTATCAGAAGATTCTCTCGTCCATT CCTGAGTTCTCCGGGTTTGGAAGGCTCTTCAAGTCCTCAGAACCTGTGGAGCTGACAGAG GCGGAGACTGAATATGCGATTAATGTGGTTAAGCACATATACAGTAGCCATGTTGTGTTG CAGTACAACTGTACAAACACTATACCCGAACAACTGCTAGAAAATGTGACTGTTTATGTT GATGCCACTGATGCTGAGGAATTTTCAGAAGTTTGTTCAAAGCCACTTAGAAGTTTGCCT TATGATTCACCTGGGCAAATTTTTGTTGCTTTTGAAAAGCCAGAACATGTTCCTGCTACT GGGAAATTTTCAAATGTGCTGAAGTTTATTGTTAAAGAGGTTGACACATCTACAGGGGAA GTTGATGAGGATGGTGTGGAGGATGAATACCAGATCGAAGACCTGGAAATTGTTTCGGCT GATTACATGCTGAGGGTTGCAGTCTCCAACTTCAGGAATGCCTGGGAAAATATGGACCCA GAAAGTGAGCGTGTCGATGAGTATGGACTTGGTGTTAGAGAGAGCTTGGCTGAGGCTGTG AGTGCTGTCATTAGTATCCTTGGTATGCAGCCTTGTGAGGGCACTGAGGTTGTACCAAAG AATGCAAGATCGCACACTTGCCTGCTGTCTGGTGTGTTCATCGGCGACGCCAAGGTTCTT GTCAGGCTATCGTTTGGACTGAGCGGGCCCAAGGAAGTGGCGATGAAGCTTGCCGTCAGG TCAGATGATCCCGAAGTCAGTGACAAGATCCACGAGATTGTTGCCAGCGGCTAA

Peptide Sequence

PEP ID	Os03t0227000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6676410:6683840:1 gene:Os03g0227000 transcript:Os03t0227000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP). (Os03t0227000-01)
Sequence	MPRSLAGDLTDPEMAQPYMKKDDDDEDVEYSPFYGIEKGAVLQEARAFHDPQLDARKCSQ VITKLLYLLNQGETFTKVEATEVFFAVTKLFQSKDAGLRRLVYLMIKELSPSSDEVIIVT SSLMKDMNSKTDMYRANAIRVLCRIIDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHL LQANPEIVKRWSNEVQEAVQSRFALVQFHGLALLHQIRQNDRLAISKMVSGLTRGSVRSP LAQCLLIRYTSQVIRESSMNTQTSDRPFFDYLESCLRHKSEMVILEAARKIAEMDVTSRE LAPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTRPLAVTNCNVDLESLMSDQNRSIATLA ITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSMMNFLSNS LREEGGFEYKKAIVDSIVTLISEIPDAKEIGLLYLCEFIEDCEFTYLSSQILHLLGNEGP RTSDPSRYIRYIYNRVILENATVRASAVSTLAKFGALVDALKPRIFVLLRRCLFDTDDEV RDRATLYLQTLDGEVAVGSTEKDVKEFLFGSFDVPLANLEASLKTYEPSEEPFDISLVSR EVKSQPLQEKKAPGKKPPAGAPAPAPVPAVDAYQKILSSIPEFSGFGRLFKSSEPVELTE AETEYAINVVKHIYSSHVVLQYNCTNTIPEQLLENVTVYVDATDAEEFSEVCSKPLRSLP YDSPGQIFVAFEKPEHVPATGKFSNVLKFIVKEVDTSTGEVDEDGVEDEYQIEDLEIVSA DYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPK NARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG

Transcript Sequence

Transcript ID	Os03t0227000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6676410:6683840:1 gene:Os03g0227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP). (Os03t0227000-01)
Sequence	ACGGCCAGGCCACCGTTTCGTAGGATCCGGAGCGCGACAAGGGGGAAAAGCTTCCCTCCA CGCACCACCCCACGGCCCTCAAAAACCTACCACCCCACGCTCCCCGGTTCGGTGGTTGCC GCCGCCTGCCACAGCGTCGCATGCCTCGCTCCCTCGCCGGCGACCTCACCGATCCGGAGA TGGCGCAGCCGTACATGAAGAAGGATGACGACGACGAGGACGTTGAGTACTCGCCATTTT ATGGGATTGAGAAGGGAGCCGTTCTGCAGGAGGCAAGGGCTTTCCATGATCCGCAGCTTG ATGCCAGGAAGTGCTCGCAAGTCATCACTAAGCTATTGTATTTACTCAACCAAGGGGAGA CATTCACAAAGGTTGAGGCCACAGAAGTTTTCTTTGCAGTAACAAAGCTGTTCCAGTCCA AGGATGCTGGTCTTAGGCGGCTGGTGTATTTAATGATCAAAGAGCTTTCACCATCATCAG ATGAGGTTATCATAGTCACAAGCTCATTAATGAAAGATATGAACAGCAAGACGGATATGT ACCGTGCCAATGCTATCAGAGTTCTGTGTAGAATAATTGATGGCACCCTCCTTACTCAAA TTGAGAGATATTTGAAACAAGCTATAGTTGATAAGAATCCTGTGGTTGCTAGTGCTGCTC TTGTTAGTGGCATCCATCTGCTTCAGGCAAATCCAGAAATCGTGAAAAGATGGAGCAACG AAGTGCAGGAAGCTGTTCAATCAAGATTTGCACTTGTGCAATTTCATGGCCTAGCTCTTC TTCACCAGATCAGACAGAATGATCGTTTAGCTATTAGCAAGATGGTTTCTGGCTTGACTA GGGGGTCTGTCCGCTCACCTCTTGCACAATGTCTTCTGATTCGTTACACGAGCCAGGTAA TACGCGAGTCAAGCATGAACACACAAACCAGTGATCGCCCATTTTTTGATTATCTGGAAT CATGTTTGAGACATAAATCAGAAATGGTGATTCTAGAGGCTGCACGGAAAATAGCAGAGA TGGATGTGACAAGTCGTGAATTAGCACCAGCGATTACTGTGTTACAGTTATTTTTGAGTT CATCCAAACCTGTCCTTCGATTTGCTGCTGTCCGGACACTCAACAAGGTTGCTATGACAC GCCCTTTGGCAGTGACAAACTGCAATGTGGACTTGGAAAGTCTGATGTCGGACCAGAATA GGAGTATAGCAACCCTGGCAATCACTACACTTCTTAAAACAGGCAATGAATCTAGCGTAG ACCGCCTCATGAAACAAATTACCAATTTCATGTCAGACATAGCAGATGAATTCAAGATAG TTGTTGTTGAAGCTATACGATCTCTATGCCTTAAGTTTCCCCTGAAGTATCGTTCAATGA TGAACTTCTTGAGTAACAGTTTGAGAGAAGAAGGGGGCTTTGAGTACAAAAAGGCCATCG TTGATTCCATAGTAACTCTTATCAGTGAGATACCAGATGCTAAAGAAATTGGTCTTTTGT ATCTCTGTGAGTTCATTGAAGACTGTGAGTTCACCTATCTTTCCAGTCAGATATTGCATC TTTTGGGAAATGAAGGACCAAGGACATCAGATCCAAGCAGATATATACGCTACATCTACA ACCGTGTGATACTGGAAAATGCCACTGTCCGTGCTAGTGCTGTCAGTACATTGGCAAAGT TTGGTGCCTTAGTTGATGCCTTGAAGCCTAGGATCTTTGTTCTTTTGCGTCGTTGCCTGT TTGACACCGATGATGAGGTTCGTGACCGTGCTACACTTTATCTCCAAACTCTTGATGGTG AAGTTGCTGTTGGTAGCACTGAGAAGGATGTTAAGGAGTTCCTATTTGGATCATTTGATG TGCCACTTGCCAACTTGGAAGCAAGTCTTAAAACCTATGAACCCTCTGAGGAGCCTTTTG ATATTTCTTTGGTGTCGAGAGAAGTCAAATCACAACCACTTCAAGAGAAAAAGGCCCCAG GAAAGAAGCCACCTGCTGGTGCTCCTGCTCCTGCACCTGTTCCAGCTGTTGATGCTTATC AGAAGATTCTCTCGTCCATTCCTGAGTTCTCCGGGTTTGGAAGGCTCTTCAAGTCCTCAG AACCTGTGGAGCTGACAGAGGCGGAGACTGAATATGCGATTAATGTGGTTAAGCACATAT ACAGTAGCCATGTTGTGTTGCAGTACAACTGTACAAACACTATACCCGAACAACTGCTAG AAAATGTGACTGTTTATGTTGATGCCACTGATGCTGAGGAATTTTCAGAAGTTTGTTCAA AGCCACTTAGAAGTTTGCCTTATGATTCACCTGGGCAAATTTTTGTTGCTTTTGAAAAGC CAGAACATGTTCCTGCTACTGGGAAATTTTCAAATGTGCTGAAGTTTATTGTTAAAGAGG TTGACACATCTACAGGGGAAGTTGATGAGGATGGTGTGGAGGATGAATACCAGATCGAAG ACCTGGAAATTGTTTCGGCTGATTACATGCTGAGGGTTGCAGTCTCCAACTTCAGGAATG CCTGGGAAAATATGGACCCAGAAAGTGAGCGTGTCGATGAGTATGGACTTGGTGTTAGAG AGAGCTTGGCTGAGGCTGTGAGTGCTGTCATTAGTATCCTTGGTATGCAGCCTTGTGAGG GCACTGAGGTTGTACCAAAGAATGCAAGATCGCACACTTGCCTGCTGTCTGGTGTGTTCA TCGGCGACGCCAAGGTTCTTGTCAGGCTATCGTTTGGACTGAGCGGGCCCAAGGAAGTGG CGATGAAGCTTGCCGTCAGGTCAGATGATCCCGAAGTCAGTGACAAGATCCACGAGATTG TTGCCAGCGGCTAAAGCGGGGCGCCCTGCCCCTGATATAAAATGATGTAGAGCCGGTAGA TAGTCTTTTTCACCTTTCGTGATAAAATAGTTATACTACACCTATTGATGCCTCACTTTT TACAGACAACACTCCTGCCTCGTGCGTATTATTGCTCAGGTAGTGTATTAGTGTATCAGA TCATGTCCCCTTGTGTAGTTGTGTTCACCGCTCGGTTTGATTTTTTGTTTCTTTTCTTTG GACAGTTTGTTTACTTAATGTGGATATAATTCATTGGTGAACCGTGAACATGCTGCGAAT CCTGTGACCTGTGAGTTGTCACACTAACAGTAACAAGTTAGTTCTCGTATGCTCACGGAA AACCACTAAATAAAGTGTTGATTAGTTTGAGCT