Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0226800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6657601:6663830:1 gene:Os03g0226800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 1 description:Similar to Cytosine-specific methyltransferase. (Os03t0226800-01)
Sequence	ATGGTCCCGGAGCCGGCTCCCGCGGCGGCGACGGAGCCGAGGCGCTCCACGCGCAGGCGC CTAATGACGGCCGCCGCGATGGAGGCCGAGGCGGAGGCGGTGGCCGACCTCGACGAGATC GACCGCGAGATGTCGCGCGCCGAGTCGCGCAAGCGCCAGCGCAGGACGGCGAAGGAGAAG CCTGGTGCCCGTAAGGGAGCGACCGAATGGAAGCCGGAGGACGTGGAGAAGGCGGCGGCG GCGGAGGGGGTGGCCGAGCTCGACGAGATCGACCGCGAGATGCCGCGCCCCGAGTTGCGC AAGCGCCAGCGCAGGACGGCGAAGGAGAAGCCTAGTGCCCATGAGGGAGCGACCGAATGG AAGCCGGAGGACGTGGAGAAGGCGGCGGCGCAGGAGCCCGAGGGGACCGAGCTCGACAGT GGGTTGTCGCCCGCAGAGTCACGCGGCAAGCGGCAGCGCGGGGTGGAGAAGGTCAAGCGT CGTACCCGTAAGAAGACGGCCAAGGAGAAGACGAAGGAGACGACCGAGAAGTCGGCGGCT CAGGCGCCCGAGAAGATGAAGGTGAACGATGCGGGTGGCGCGCTGGCCGAAGACGTGTGC GCGGATGAGCCGGACGCCGAACAGATGGCCATGGAGGAGGAGGAGGAGGCAGCCGACGTG CTGGAAGCAGAGGAGAGGATGGGTAAGTGTGTCGGAGAAGGATCAGCCGAGAAGGCTGCG ACGAGGAAGAGGGTGGCGCGGCCAAGCACTGCGAGAAGGGTGGAGGACTCAGATGACCAC TTTGTGGGCGATCCAGTACCGGATGATGAAGCGCGACAACGATGGCCCGTGAGGTACAGT AGAAAGGGGTCTGATTCGCTTCTTAAGCAGGAGCCTGACGAAGATGAAGAAATGAAGGCT CGATGTCACTACCTGGCTGCTAATGTGGATGATGAAATCTATCATCTTGATGATGATGTC TATGTCAAGGCTGGTCCTGATGAGGAAAATTACATTGGACGGATTACTGAATTTTTTGAA GGAGTCGACCGTGGATCATATTTCTCTTGTCAGTGGTTTTTCCGTACAGCAGATACGGTC ATCTCATCAAAGTTGTTAAAGGTGCATGATCATAGACATAACCATAAGCGTGTTTTTCTT TCAAAGGAGAAGAATGACAACTTGATTGAGTGCATAGTCTCAAAAGTAAAGATTGCCCAT GTTGATCCAAATATGACGCCTCAAGCAAGAGCTCATGCTATATCTGATTGTGACCTGTAC TATGACATGTCTTACTCTGTTGCATATTCCACGTTTGCAAATCTTCCAGCAGATAATGAT GGTGCATTGGGGAGTGAGGCAACATCAAATATTTCCTGCGATGATGCTGACAATTCTTCT AAGGGAAAATTGTCGGCTGATATTGTGGCACCATATAGTGAACAAACAGAGACAGCTTCT CTGCTTGATCTTTACTCAGGATGTGGCGCTATGTCAACTGGGCTTTGTTTGGGTTTTGCA TTTTCTGGCATAAATTTAGAGACTAGGTGGGCTGTTGACATAAACAAATATGCTTGTGCT TGTCTCAAACATAATCACCCATACTCGCAGGTGCGGAACGAGAAAACTGAGGATTTTCTT GCCCTTATTCAGCAGTGGGATGCACTTTGTAGAAAATATGTTGTCCACAAAAACGATACA CTAGAACCTAGTATAGATATGCCCTTAAATGATGCTGACGATGTAAATGAGCCTCTTCCA GAAGATATATTCGATGTAGAGGAGCTCCTTGAGATATGCTATGGTGATCCAAGTAACACA GGAAAAAATGGCTTGTGGTTTAAGGTGCGGTGGAAAGGGTATGATCCAAGTTATGATACA TGGGAGCCAATTGATGGGCTCAGTGATTGCCCTGAGCGTATTAAAGAATTTGTAGAGAAA GGACACAAGGAAAATATTTTGCCCTTGCCCGGTGCTGTGGATGTCATATGTGGTGGGCCT CCATGTCAAGGCATCAGTGGGTTCAACCGATTCAGAAAGCATAATGATCCACTTGAGGAT GAAAAGAACAAACAGTTGGTTGTTTTTATGGATATAGTGAAGTATCTGAGGCCCAAATAT GTCCTCATGGAAAATGTTGTGGACATATTGAAATTTGCAGATGGATTCCTTGGACGCTAT GCAATGAGTTGCCTTGTGGCTATGAATTATCAAGCTAGGCTTGGGATGATGGCGGCAGGA TATTATGGGCTACCGCAGTTCAGAATGCGGGCATTTCTCTGGGGAGCCCTTCCATCAATG GTATTACCAAAATTCCCACTTCCTACCCATGATGCTGTTGTGCGTGGAATAGTACCAACT ACATTTTCGCAAAGTGTTGTTGCATACAATGAGGTAGACACCCGTTGCCTACGAAAGGCT CTTCTCCTTGCAGATGCCATATCTGATTTACCCAAGGTTGGAAATGATCAACCTAAAGAT GTAATAGAGTATAGTGTTGCCCCCAAAACTGAATTTCAACGGTATATCCGGAACAACCGT AAAGACATTCAGGATTACTCTTTTCGTGGAGATGATCCTTCTGAAGAAGGTAAATTGTTT GATCATCAACCTCTAAAGCTAAACAAAGATGATTATGAGCGTGTGCAGCGGATACCTGTA AAAAAGGGAGCGAACTTTCGTGATCTAAAGGGCGTCATAGTTGGCCCAGATAATACTGTG CGGCTGGATCCAAACATTTCCCGTGAACGACTGTCATCTGGGAAGCCTTTGGTGCCTGAC TATGCCATATCTTTCGTCAAGGGGAAGTCAACTAAACCGTTTGGACGCCTGTGGTGGGAT GAAACTGTTCCCACTGTAGTTACCAGAGCTGAGCCTCACAACCAGATTATTTTGCATCCT AGCCAAGACCGAGTTCTGACTATTCGCGAGAATGCAAGGTTGCAAGGTTTTCCTGACTAT TACAGATTGATCGGCCCACTAAAGGAGAAATATATCCAGGTTGGCAATGCGGTTGCAATT CCAGTTGCTCGAGCTTTGGGGTATGCTCTTGGGCTGGCCTACCGGGGTGAATCTGATGGA GATCGAGCAGTACTCAAATTGCCAGAGAGTTTTATTTATGCTGATCAAGAGACGGTTGTT AAATCTTCGGCAGGAACTCCTGGAAGTGAAATAGCTGATTCGGAACAGTTGTTTGAATAG

Peptide Sequence

PEP ID	Os03t0226800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6657601:6663830:1 gene:Os03g0226800 transcript:Os03t0226800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 1 description:Similar to Cytosine-specific methyltransferase. (Os03t0226800-01)
Sequence	MVPEPAPAAATEPRRSTRRRLMTAAAMEAEAEAVADLDEIDREMSRAESRKRQRRTAKEK PGARKGATEWKPEDVEKAAAAEGVAELDEIDREMPRPELRKRQRRTAKEKPSAHEGATEW KPEDVEKAAAQEPEGTELDSGLSPAESRGKRQRGVEKVKRRTRKKTAKEKTKETTEKSAA QAPEKMKVNDAGGALAEDVCADEPDAEQMAMEEEEEAADVLEAEERMGKCVGEGSAEKAA TRKRVARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKA RCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTV ISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLY YDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETAS LLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFL ALIQQWDALCRKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYGDPSNT GKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICGGP PCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRY AMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPT TFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNR KDIQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDNTV RLDPNISRERLSSGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQIILHP SQDRVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARALGYALGLAYRGESDG DRAVLKLPESFIYADQETVVKSSAGTPGSEIADSEQLFE

Transcript Sequence

Transcript ID	Os03t0226800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6657601:6663830:1 gene:Os03g0226800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 1 description:Similar to Cytosine-specific methyltransferase. (Os03t0226800-01)
Sequence	GACGTCACGCATTCCCGCGAATCCGGCCTGCTCGAGACCTCCTCCCGTCGCGACGCCGCA AGCCATCAAAGCGCCTCCTGCTTCCGCTCCTATCCAAGGCGAACCACACTCTGCGATCGA GAGCTCGCTGAGCCGTAAAACCCTAGCTAATCCTTCTCTCTCCCCCCCTCTCGCTGTCGT CTCCGTCTCCGTCTCCGATCTCCGCGGCCTCGGTTGCGGGCTGCGGCTGCGCCGGTGCGG CTCCATGGTCCCGGAGCCGGCTCCCGCGGCGGCGACGGAGCCGAGGCGCTCCACGCGCAG GCGCCTAATGACGGCCGCCGCGATGGAGGCCGAGGCGGAGGCGGTGGCCGACCTCGACGA GATCGACCGCGAGATGTCGCGCGCCGAGTCGCGCAAGCGCCAGCGCAGGACGGCGAAGGA GAAGCCTGGTGCCCGTAAGGGAGCGACCGAATGGAAGCCGGAGGACGTGGAGAAGGCGGC GGCGGCGGAGGGGGTGGCCGAGCTCGACGAGATCGACCGCGAGATGCCGCGCCCCGAGTT GCGCAAGCGCCAGCGCAGGACGGCGAAGGAGAAGCCTAGTGCCCATGAGGGAGCGACCGA ATGGAAGCCGGAGGACGTGGAGAAGGCGGCGGCGCAGGAGCCCGAGGGGACCGAGCTCGA CAGTGGGTTGTCGCCCGCAGAGTCACGCGGCAAGCGGCAGCGCGGGGTGGAGAAGGTCAA GCGTCGTACCCGTAAGAAGACGGCCAAGGAGAAGACGAAGGAGACGACCGAGAAGTCGGC GGCTCAGGCGCCCGAGAAGATGAAGGTGAACGATGCGGGTGGCGCGCTGGCCGAAGACGT GTGCGCGGATGAGCCGGACGCCGAACAGATGGCCATGGAGGAGGAGGAGGAGGCAGCCGA CGTGCTGGAAGCAGAGGAGAGGATGGGTAAGTGTGTCGGAGAAGGATCAGCCGAGAAGGC TGCGACGAGGAAGAGGGTGGCGCGGCCAAGCACTGCGAGAAGGGTGGAGGACTCAGATGA CCACTTTGTGGGCGATCCAGTACCGGATGATGAAGCGCGACAACGATGGCCCGTGAGGTA CAGTAGAAAGGGGTCTGATTCGCTTCTTAAGCAGGAGCCTGACGAAGATGAAGAAATGAA GGCTCGATGTCACTACCTGGCTGCTAATGTGGATGATGAAATCTATCATCTTGATGATGA TGTCTATGTCAAGGCTGGTCCTGATGAGGAAAATTACATTGGACGGATTACTGAATTTTT TGAAGGAGTCGACCGTGGATCATATTTCTCTTGTCAGTGGTTTTTCCGTACAGCAGATAC GGTCATCTCATCAAAGTTGTTAAAGGTGCATGATCATAGACATAACCATAAGCGTGTTTT TCTTTCAAAGGAGAAGAATGACAACTTGATTGAGTGCATAGTCTCAAAAGTAAAGATTGC CCATGTTGATCCAAATATGACGCCTCAAGCAAGAGCTCATGCTATATCTGATTGTGACCT GTACTATGACATGTCTTACTCTGTTGCATATTCCACGTTTGCAAATCTTCCAGCAGATAA TGATGGTGCATTGGGGAGTGAGGCAACATCAAATATTTCCTGCGATGATGCTGACAATTC TTCTAAGGGAAAATTGTCGGCTGATATTGTGGCACCATATAGTGAACAAACAGAGACAGC TTCTCTGCTTGATCTTTACTCAGGATGTGGCGCTATGTCAACTGGGCTTTGTTTGGGTTT TGCATTTTCTGGCATAAATTTAGAGACTAGGTGGGCTGTTGACATAAACAAATATGCTTG TGCTTGTCTCAAACATAATCACCCATACTCGCAGGTGCGGAACGAGAAAACTGAGGATTT TCTTGCCCTTATTCAGCAGTGGGATGCACTTTGTAGAAAATATGTTGTCCACAAAAACGA TACACTAGAACCTAGTATAGATATGCCCTTAAATGATGCTGACGATGTAAATGAGCCTCT TCCAGAAGATATATTCGATGTAGAGGAGCTCCTTGAGATATGCTATGGTGATCCAAGTAA CACAGGAAAAAATGGCTTGTGGTTTAAGGTGCGGTGGAAAGGGTATGATCCAAGTTATGA TACATGGGAGCCAATTGATGGGCTCAGTGATTGCCCTGAGCGTATTAAAGAATTTGTAGA GAAAGGACACAAGGAAAATATTTTGCCCTTGCCCGGTGCTGTGGATGTCATATGTGGTGG GCCTCCATGTCAAGGCATCAGTGGGTTCAACCGATTCAGAAAGCATAATGATCCACTTGA GGATGAAAAGAACAAACAGTTGGTTGTTTTTATGGATATAGTGAAGTATCTGAGGCCCAA ATATGTCCTCATGGAAAATGTTGTGGACATATTGAAATTTGCAGATGGATTCCTTGGACG CTATGCAATGAGTTGCCTTGTGGCTATGAATTATCAAGCTAGGCTTGGGATGATGGCGGC AGGATATTATGGGCTACCGCAGTTCAGAATGCGGGCATTTCTCTGGGGAGCCCTTCCATC AATGGTATTACCAAAATTCCCACTTCCTACCCATGATGCTGTTGTGCGTGGAATAGTACC AACTACATTTTCGCAAAGTGTTGTTGCATACAATGAGGTAGACACCCGTTGCCTACGAAA GGCTCTTCTCCTTGCAGATGCCATATCTGATTTACCCAAGGTTGGAAATGATCAACCTAA AGATGTAATAGAGTATAGTGTTGCCCCCAAAACTGAATTTCAACGGTATATCCGGAACAA CCGTAAAGACATTCAGGATTACTCTTTTCGTGGAGATGATCCTTCTGAAGAAGGTAAATT GTTTGATCATCAACCTCTAAAGCTAAACAAAGATGATTATGAGCGTGTGCAGCGGATACC TGTAAAAAAGGGAGCGAACTTTCGTGATCTAAAGGGCGTCATAGTTGGCCCAGATAATAC TGTGCGGCTGGATCCAAACATTTCCCGTGAACGACTGTCATCTGGGAAGCCTTTGGTGCC TGACTATGCCATATCTTTCGTCAAGGGGAAGTCAACTAAACCGTTTGGACGCCTGTGGTG GGATGAAACTGTTCCCACTGTAGTTACCAGAGCTGAGCCTCACAACCAGATTATTTTGCA TCCTAGCCAAGACCGAGTTCTGACTATTCGCGAGAATGCAAGGTTGCAAGGTTTTCCTGA CTATTACAGATTGATCGGCCCACTAAAGGAGAAATATATCCAGGTTGGCAATGCGGTTGC AATTCCAGTTGCTCGAGCTTTGGGGTATGCTCTTGGGCTGGCCTACCGGGGTGAATCTGA TGGAGATCGAGCAGTACTCAAATTGCCAGAGAGTTTTATTTATGCTGATCAAGAGACGGT TGTTAAATCTTCGGCAGGAACTCCTGGAAGTGAAATAGCTGATTCGGAACAGTTGTTTGA ATAGTATGTTATCTGAGTCACTTGTATAGTTGGGTGATGTGCTATAATTGTTTCTGTATG AGTTTCGAACACGGACAGTGCATGCATTGTCCAATGCTCCAAACATTCACTGGTTAACCC TGGAACTGAGTAATTTGC