Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0225500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6573239:6580610:1 gene:Os03g0225500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 133 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os03t0225500-01);Nucleoporin, Nup133/Nup155-like, N-terminal domain containing protein. (Os03t0225500-02)
Sequence	ATGTTCTCCCCGGCGATCAAGAAGCCCCACCTGCTCCACCGCAGGGACAAGGAGGAGGCG TCCCCCTCACCCCCTCCCGCTCCCGCGCACACGCCCGCGCCTCGTGGATTTGCCGTCCAC GACCGCCCCGCCACCGGCACCCCGGCGCCGTGGACCTCCTCCTCCCTGCTCGCCAGGATT TCAACATCAACACGAACAGACAGGACAGGGGATTCTGGCCAGATCCAACCGGTGCATGTA TCCGAATTTCCCCAAATAGTTCGAAATGCTCAAGCCAACCTTCTGCAAAAGAGTTTTTCC GGCAAGAACATGCTTGCTGGTGGCATTGATAAAGAAACATCCCTTGCATGGATGTTATGT GGAAATGAGCTTTTTATCTGGAGTTACCTGGCTTCTGTTGCAAAAGACTGTCTTGTACTT GAGGTCCCTTCTTCTCTTATGGGGAACAAAGAAGAAAAATCTCTATGTGGTAATCAGTGG GCAGTTTGCATAGTGAGATGGGGTAGTAGTGGTGCATCAACACGGAGCAGTGGAGATATA TTGCATCGAAGAAGTTCGACTGGTTTTATCCTGTGCAACAAAAGAACACAAGCTATAGCT TATTGGTCTGATATCTATGCTGAAAGCAGTAAGAGTTCAGTTCTTGATTTAATTGGATAT GGTGATACATCTTCAGGTGATGGCACATCTGGAAACTGCAGGATTAATTCTCTTATTGCA GTGGCAGTTCCAGGAGGTATTAATGAATGCATTGTGATTGCTTCTCAGCCAACAGGCACA TTATGGATGTTCTGGTGTTCACCAGCTGCAGTTCGTCGAAGAGAAATTCATAAGGGTACA TTAGGAGTTTATAATGCTGATCATTCTCAGAAAAATAGTGGTGGAAGGTCCTTGGCTTGG CTACCAAGTAAAGCATCATCTAAGGCTGCTGAACGGACGTTCTTTTTATTGACTAGTCAT GAGCTGCAATGCTGGAGCATCTCATTCGGGCATGATATCAACTGCAAAAAAATAGGGTCT CAGGAAATTGTTGGTAGTGATGGTGATATGGGAATAAAGAAAGACATAGCTGGACAGAAA AACATATGGCTTTTGGACATGCAGATAGATGATCATGGGAAAGAAATTATCATTCTTGTT GCTACCTTCTGCAAAGATCGGGTGAGTGGGTCGAACTACACTCAGTATTCTCTTCTGACG ATGCTGTACAGACCTAACCAAAAGTTTTCATCTGAAGATAATGTGATTAAAACTGAAAGG TTTTTGGAGAAAAAAGCTCCTTCTCAGGTGATAATCCCTAAGGCTAGAGTAGAGGATGAA GAGTTCTTGTTTTCTATGAGGCTAAAAACTGGTGGTAAGCCTTCTGGTTCTGTAATCATA CTGTCAGGTGATGGAACAGCAACAATAGCCATATACTGGAGAGGTTCAACCCGTCTCTAT CAATTTGATCTGCCTTGGGATGCTGGAAAGGTTCTCGATGCTTCAGTTATCCCATCTTCC GAGGACAGAGATGAAGGAGCTTGGGTTGTTCTTACAGAAAAGGCAGGAGTGTGGGCAATT CCTGAGAAAGCTGTGTTAGTTGGTGGGGTTGAGCCACCAGAGCGGAGCTTGTCAAGAAAA GGAAGTTGCAATGAAGCAGTTGCTGAAGAGAAAAGAAGAAATCAGGCATTCAATGCTAGT GTTGTACCCAGAAGAGCTAGTTCTGAGGCTTGGAGTGCTGGAGAGAGGCAAAGACCAGCA TTAACTGGTATAGCTCAGCAGGCTGTGGTTGATGAGGAGTCTGAAATGTTATTAAACCGG TTATTTCATGATTTTGTTTTGTCCGGTACAGTTCATGAAGCACTTCAAAAGCTTAGAGCA GCAGGCGCATTTGACAAAGAGGGTGAGATGAACATATTTGTTCGAATAAGCAAATCCATC GTAAACACTCTATCTAAGCATTGGACAACAACTAGAGAAGCTGAATTTCTTGCTTCAACA ATTGTTTCATCCCTAACTGAGAAGCAGCAAAAACACAAGAAATTCCTTCAGTTTCTTGTC TTGTCTAAGTGCCATGAGGAACTCTCTTCAAAGCAAAGAACTGCGATGCTAACTGTCATG GAGCATGGAGAAAAGCTCTCTGGAATGATCCAGCTCAGAGAATTACAAAATGCTCTTAGC CATCAACGCTCAAGCATACATTTATCACCTCAGTCAAAAAACCAAACAACTGGTGCATTG TGGAACCTTATTCAATTGGTTGGTGAGCAATCTCGAAGAAACACTGTTCTCTTAATGGAC CGTGATAATGCTGAAGTGTTCTACAGCAGAGTTTCAGATATAGAAGATCTATTTAATTGC ATATCTCATCAGCTTCAATACATTATAACCGGAGAAGAAAACCCTTCTGTTCAGATGCAA CGTGCACTTGAGTTATCAAATGCTTGCATGACCCTAGTTCAGGCAGCATTGCGCTACAGA GAGGAGCACAAGGACTGGTATCCTTCTCCTGAAGGACTGATAACATGGAACAGCCAGCCT GTTGTACGATCTGGAATCTGGCGAGTAGCATCCTTTGCCATGGAGCTTTTGAGAGAACCA GGGGCTGCGGACATGTCAATGAAGTCAAACCTATGGTCTCAGTTGGAACGACTCACAGAT ATCCTACTGGATGCATATATTGGGTTGTTAACTGCTAAATTCGAGCGTGGGGATGAGCAT GGTGTGCTAATCCAAGAATACTGTGACAGAAGAGATGAACTTCTTGGGTCCCTCTATGAC CTCGCAAAACAAATTGTAGATGCAAAATATCAGGAGACGACAGAAGTCACTGACAATCTG GAACTGAAAGAATCTATATTCAGAGAAGTCACTTCTCCAATTTTGGCAACAGCTAAACGG CATGAAGGGTACCAAACATTGTGGCAGATTTGCTATGATCTCAGTGATACAGGCCTTCTT CGCAGTCTTATGCATGATAGTGTAGGACCTCACGGGGGATTCAGTTTCTTTGTTTTCAAA CAACTAGTCAACAGGCGTCAACATGCTAAGCTATTAAGATTAGGTGAAGAATTCCCGGAA GAGCTAGCCAATTTTCTGAAAGAGCGGGATGATCTTCTGTGGCTTCATGAGATATGCTTA AATCGGTTCTCTTCTGCTTCGAAGACTCTTCATACTCTCGTGAGTCCTGAGGAAGATGCT AACCTTACAAGCAACAGGAAATCACTGTCCTTTGTTGAAAGAAGACGCTTTCTCTATCTC TCCAAAATTGCAGCAGCAGCAGGTAAGGATGTTGATTATGAAGTGAAGGTTGCCCATATA GATGCAGATATCCGAATTCTAAATCTGCAGGAAGAGATTGTTCAGCATGACCCAGAGTAT GCACCAGATAAATATACTACCAAGCCATTTCGTCCATTGGAACTGATCGAGATGTGCCTG AAGGGAGATCGAGAGCTCTCTCTTAAAGCTTTTGAAGTATTTGCTTGGACGAGGGCCTCG TTCCGGAGCTCCAACAAAGGCCTTCTAGAGGCTTGCTGGATGAATGCAGCCGACCAGGAC GACTGGGTTAGCCTTCAAGAGGAATCTTCAGGAGGTTGGAGCGATGAAGTCATCCAAGAA TCTCTTCAGGGCACTGTCCTGTTCAATGCCTCCAGGCTGTGTTATAGCCCAGACGCCGTG GTGTATGACGGTTCGTTTGAGGACGTGCTGCCTGTGAAGAAAGAAGACGTGCATCTGAGA GGCTTGGAGGGCAGATGTCTCTCAGTGGAGGAAGTGCTGATGCAGCACAAGGATTTCCCT GATGCGGGTAAATTGATGATGACCGCGGTGATAATGGGCAAGGAGCTACCTTATACTGTT TCCACAGCTGAACCTGTTGACATGGACTCTTGA

Peptide Sequence

PEP ID	Os03t0225500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6573239:6580610:1 gene:Os03g0225500 transcript:Os03t0225500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 133 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os03t0225500-01);Nucleoporin, Nup133/Nup155-like, N-terminal domain containing protein. (Os03t0225500-02)
Sequence	MFSPAIKKPHLLHRRDKEEASPSPPPAPAHTPAPRGFAVHDRPATGTPAPWTSSSLLARI STSTRTDRTGDSGQIQPVHVSEFPQIVRNAQANLLQKSFSGKNMLAGGIDKETSLAWMLC GNELFIWSYLASVAKDCLVLEVPSSLMGNKEEKSLCGNQWAVCIVRWGSSGASTRSSGDI LHRRSSTGFILCNKRTQAIAYWSDIYAESSKSSVLDLIGYGDTSSGDGTSGNCRINSLIA VAVPGGINECIVIASQPTGTLWMFWCSPAAVRRREIHKGTLGVYNADHSQKNSGGRSLAW LPSKASSKAAERTFFLLTSHELQCWSISFGHDINCKKIGSQEIVGSDGDMGIKKDIAGQK NIWLLDMQIDDHGKEIIILVATFCKDRVSGSNYTQYSLLTMLYRPNQKFSSEDNVIKTER FLEKKAPSQVIIPKARVEDEEFLFSMRLKTGGKPSGSVIILSGDGTATIAIYWRGSTRLY QFDLPWDAGKVLDASVIPSSEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRK GSCNEAVAEEKRRNQAFNASVVPRRASSEAWSAGERQRPALTGIAQQAVVDEESEMLLNR LFHDFVLSGTVHEALQKLRAAGAFDKEGEMNIFVRISKSIVNTLSKHWTTTREAEFLAST IVSSLTEKQQKHKKFLQFLVLSKCHEELSSKQRTAMLTVMEHGEKLSGMIQLRELQNALS HQRSSIHLSPQSKNQTTGALWNLIQLVGEQSRRNTVLLMDRDNAEVFYSRVSDIEDLFNC ISHQLQYIITGEENPSVQMQRALELSNACMTLVQAALRYREEHKDWYPSPEGLITWNSQP VVRSGIWRVASFAMELLREPGAADMSMKSNLWSQLERLTDILLDAYIGLLTAKFERGDEH GVLIQEYCDRRDELLGSLYDLAKQIVDAKYQETTEVTDNLELKESIFREVTSPILATAKR HEGYQTLWQICYDLSDTGLLRSLMHDSVGPHGGFSFFVFKQLVNRRQHAKLLRLGEEFPE ELANFLKERDDLLWLHEICLNRFSSASKTLHTLVSPEEDANLTSNRKSLSFVERRRFLYL SKIAAAAGKDVDYEVKVAHIDADIRILNLQEEIVQHDPEYAPDKYTTKPFRPLELIEMCL KGDRELSLKAFEVFAWTRASFRSSNKGLLEACWMNAADQDDWVSLQEESSGGWSDEVIQE SLQGTVLFNASRLCYSPDAVVYDGSFEDVLPVKKEDVHLRGLEGRCLSVEEVLMQHKDFP DAGKLMMTAVIMGKELPYTVSTAEPVDMDS

Transcript Sequence

Transcript ID	Os03t0225500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6573239:6580610:1 gene:Os03g0225500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 133 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os03t0225500-01);Nucleoporin, Nup133/Nup155-like, N-terminal domain containing protein. (Os03t0225500-02)
Sequence	GAGCGCCGACGCCGAGACGCCGAGAGCCCAAGGCCGGCTAGTCGGAGAGTGCGGCCGCGT GCGGGTGGCTGCTGCGCTGCGCGAACTCCCCCGCCGCCAAAGATGTTCTCCCCGGCGATC AAGAAGCCCCACCTGCTCCACCGCAGGGACAAGGAGGAGGCGTCCCCCTCACCCCCTCCC GCTCCCGCGCACACGCCCGCGCCTCGTGGATTTGCCGTCCACGACCGCCCCGCCACCGGC ACCCCGGCGCCGTGGACCTCCTCCTCCCTGCTCGCCAGGATTTCAACATCAACACGAACA GACAGGACAGGGGATTCTGGCCAGATCCAACCGGTGCATGTATCCGAATTTCCCCAAATA GTTCGAAATGCTCAAGCCAACCTTCTGCAAAAGAGTTTTTCCGGCAAGAACATGCTTGCT GGTGGCATTGATAAAGAAACATCCCTTGCATGGATGTTATGTGGAAATGAGCTTTTTATC TGGAGTTACCTGGCTTCTGTTGCAAAAGACTGTCTTGTACTTGAGGTCCCTTCTTCTCTT ATGGGGAACAAAGAAGAAAAATCTCTATGTGGTAATCAGTGGGCAGTTTGCATAGTGAGA TGGGGTAGTAGTGGTGCATCAACACGGAGCAGTGGAGATATATTGCATCGAAGAAGTTCG ACTGGTTTTATCCTGTGCAACAAAAGAACACAAGCTATAGCTTATTGGTCTGATATCTAT GCTGAAAGCAGTAAGAGTTCAGTTCTTGATTTAATTGGATATGGTGATACATCTTCAGGT GATGGCACATCTGGAAACTGCAGGATTAATTCTCTTATTGCAGTGGCAGTTCCAGGAGGT ATTAATGAATGCATTGTGATTGCTTCTCAGCCAACAGGCACATTATGGATGTTCTGGTGT TCACCAGCTGCAGTTCGTCGAAGAGAAATTCATAAGGGTACATTAGGAGTTTATAATGCT GATCATTCTCAGAAAAATAGTGGTGGAAGGTCCTTGGCTTGGCTACCAAGTAAAGCATCA TCTAAGGCTGCTGAACGGACGTTCTTTTTATTGACTAGTCATGAGCTGCAATGCTGGAGC ATCTCATTCGGGCATGATATCAACTGCAAAAAAATAGGGTCTCAGGAAATTGTTGGTAGT GATGGTGATATGGGAATAAAGAAAGACATAGCTGGACAGAAAAACATATGGCTTTTGGAC ATGCAGATAGATGATCATGGGAAAGAAATTATCATTCTTGTTGCTACCTTCTGCAAAGAT CGGGTGAGTGGGTCGAACTACACTCAGTATTCTCTTCTGACGATGCTGTACAGACCTAAC CAAAAGTTTTCATCTGAAGATAATGTGATTAAAACTGAAAGGTTTTTGGAGAAAAAAGCT CCTTCTCAGGTGATAATCCCTAAGGCTAGAGTAGAGGATGAAGAGTTCTTGTTTTCTATG AGGCTAAAAACTGGTGGTAAGCCTTCTGGTTCTGTAATCATACTGTCAGGTGATGGAACA GCAACAATAGCCATATACTGGAGAGGTTCAACCCGTCTCTATCAATTTGATCTGCCTTGG GATGCTGGAAAGGTTCTCGATGCTTCAGTTATCCCATCTTCCGAGGACAGAGATGAAGGA GCTTGGGTTGTTCTTACAGAAAAGGCAGGAGTGTGGGCAATTCCTGAGAAAGCTGTGTTA GTTGGTGGGGTTGAGCCACCAGAGCGGAGCTTGTCAAGAAAAGGAAGTTGCAATGAAGCA GTTGCTGAAGAGAAAAGAAGAAATCAGGCATTCAATGCTAGTGTTGTACCCAGAAGAGCT AGTTCTGAGGCTTGGAGTGCTGGAGAGAGGCAAAGACCAGCATTAACTGGTATAGCTCAG CAGGCTGTGGTTGATGAGGAGTCTGAAATGTTATTAAACCGGTTATTTCATGATTTTGTT TTGTCCGGTACAGTTCATGAAGCACTTCAAAAGCTTAGAGCAGCAGGCGCATTTGACAAA GAGGGTGAGATGAACATATTTGTTCGAATAAGCAAATCCATCGTAAACACTCTATCTAAG CATTGGACAACAACTAGAGAAGCTGAATTTCTTGCTTCAACAATTGTTTCATCCCTAACT GAGAAGCAGCAAAAACACAAGAAATTCCTTCAGTTTCTTGTCTTGTCTAAGTGCCATGAG GAACTCTCTTCAAAGCAAAGAACTGCGATGCTAACTGTCATGGAGCATGGAGAAAAGCTC TCTGGAATGATCCAGCTCAGAGAATTACAAAATGCTCTTAGCCATCAACGCTCAAGCATA CATTTATCACCTCAGTCAAAAAACCAAACAACTGGTGCATTGTGGAACCTTATTCAATTG GTTGGTGAGCAATCTCGAAGAAACACTGTTCTCTTAATGGACCGTGATAATGCTGAAGTG TTCTACAGCAGAGTTTCAGATATAGAAGATCTATTTAATTGCATATCTCATCAGCTTCAA TACATTATAACCGGAGAAGAAAACCCTTCTGTTCAGATGCAACGTGCACTTGAGTTATCA AATGCTTGCATGACCCTAGTTCAGGCAGCATTGCGCTACAGAGAGGAGCACAAGGACTGG TATCCTTCTCCTGAAGGACTGATAACATGGAACAGCCAGCCTGTTGTACGATCTGGAATC TGGCGAGTAGCATCCTTTGCCATGGAGCTTTTGAGAGAACCAGGGGCTGCGGACATGTCA ATGAAGTCAAACCTATGGTCTCAGTTGGAACGACTCACAGATATCCTACTGGATGCATAT ATTGGGTTGTTAACTGCTAAATTCGAGCGTGGGGATGAGCATGGTGTGCTAATCCAAGAA TACTGTGACAGAAGAGATGAACTTCTTGGGTCCCTCTATGACCTCGCAAAACAAATTGTA GATGCAAAATATCAGGAGACGACAGAAGTCACTGACAATCTGGAACTGAAAGAATCTATA TTCAGAGAAGTCACTTCTCCAATTTTGGCAACAGCTAAACGGCATGAAGGGTACCAAACA TTGTGGCAGATTTGCTATGATCTCAGTGATACAGGCCTTCTTCGCAGTCTTATGCATGAT AGTGTAGGACCTCACGGGGGATTCAGTTTCTTTGTTTTCAAACAACTAGTCAACAGGCGT CAACATGCTAAGCTATTAAGATTAGGTGAAGAATTCCCGGAAGAGCTAGCCAATTTTCTG AAAGAGCGGGATGATCTTCTGTGGCTTCATGAGATATGCTTAAATCGGTTCTCTTCTGCT TCGAAGACTCTTCATACTCTCGTGAGTCCTGAGGAAGATGCTAACCTTACAAGCAACAGG AAATCACTGTCCTTTGTTGAAAGAAGACGCTTTCTCTATCTCTCCAAAATTGCAGCAGCA GCAGGTAAGGATGTTGATTATGAAGTGAAGGTTGCCCATATAGATGCAGATATCCGAATT CTAAATCTGCAGGAAGAGATTGTTCAGCATGACCCAGAGTATGCACCAGATAAATATACT ACCAAGCCATTTCGTCCATTGGAACTGATCGAGATGTGCCTGAAGGGAGATCGAGAGCTC TCTCTTAAAGCTTTTGAAGTATTTGCTTGGACGAGGGCCTCGTTCCGGAGCTCCAACAAA GGCCTTCTAGAGGCTTGCTGGATGAATGCAGCCGACCAGGACGACTGGGTTAGCCTTCAA GAGGAATCTTCAGGAGGTTGGAGCGATGAAGTCATCCAAGAATCTCTTCAGGGCACTGTC CTGTTCAATGCCTCCAGGCTGTGTTATAGCCCAGACGCCGTGGTGTATGACGGTTCGTTT GAGGACGTGCTGCCTGTGAAGAAAGAAGACGTGCATCTGAGAGGCTTGGAGGGCAGATGT CTCTCAGTGGAGGAAGTGCTGATGCAGCACAAGGATTTCCCTGATGCGGGTAAATTGATG ATGACCGCGGTGATAATGGGCAAGGAGCTACCTTATACTGTTTCCACAGCTGAACCTGTT GACATGGACTCTTGATACTGTCACATTCTGTCAGGGAGAAAGACCTGCAGGTTGGGACCT CCAAATCTGAAATCAGAGTCAATTTTCTTTTCTTTGCAGCACGGAATGTGTGCAGTTCCA GATGTATTCATATTGCGGGCGAAACTATTTGTAGAGACTGCAAGATTTTGTCAGTTCGTG CCCTTTTTTAGCATGAGCTGTGGCTTGAAACGAGTTTTTCTCC