Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0225300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6563392:6565219:-1 gene:Os03g0225300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0225300-01)
Sequence	ATGCCTCAGCGGCGGCCGCGCCTGGCGCCCCTCACCCGCCGCCTCTCCACCTGCCGGGAC GGCGACCTCGCCGCCCTCCTCTCGGTCCTCCGCTCGCCGCCAGCATCCTCCACGTCGCTC CCGCGCGCACTCTCCAGTGCCTTCCCGTCCCCATCCGACTCCTTCCCCCTCGGCAAGCTC CCCTCCCTCCTCCCGCTCCTCCCCTCCCCACTCCTCTCCCTCCGGTTCCTCCTGTGGCGC CTTCCCCCCTCCTCGCCGCTCCCGTCCTCGTACGCCCTCTCCTCGCTCGCCGCCTCGCTC CCCGATCTCCCGTCCGCCGTGCCCCTCCTCCTCTCCTCGTCGCCGCAACCTCTCCCGCTC AGGCACTACGCCCTCCTCCTGGGCATCTCCGCACACGCTGGACTATTCCCCGCCTCCCTC GCTCTCCTGCGGCACATGCGCTCCTTCGGCCTCGCCCCCGATGCTGCTTGCTTCCGCTCC GCCCTCCGCTCGGCCGGCTCTCCCGGCGATGTCTGTGCCGTTCTCGGTATCATGTCGGCG TGCGGTGTCTCGCCGAGCGTCCCACTGGTTGTGACCTCGGTGCATAAGCTGGCAACCGCG GGGGACTTCGTCGGTGCCCGCCAGCTGATCGAGAAAATGCCGGAGTTTGGGTGCGTGACC AATGTGGCCGTGTACACCGCGTTGCTCGACGGGATGTGCAGTTTCGGGGATGTGGATGCA GCGCTGAGGCTGGTGGAAGAGATGGAGGGTTGGAGCTTGGGTGCAGGGTGCGTGCCCAAC GTGGTGTCGTATACGTGTTTGGTGAAATGCCTGTGTGGGAAAAAGAGGATGGGGGAGGCG CTGAGCTTGCTGGATAGGATGACAGGAAGAGGGGTGATGCCCAACCGGGTGTTCGTGCGA ACGCTCGTCGGCGGATTCTGTTCAGAGGAGATGGTCGCAGACGCTTATGCTGTAGTGGAG CGTGTGGTCAGCGATGGGAGTGTGTCGAGCGACCAATGCTACAATGTGCTGCTTATTTGC CTGTGGAGGGTTGGGATGGATGGTGAAGCTGAAGGGCTTGTGCAGAGGATGATGAAGAAA GGGGTGCGGCTGAGCCCTCTTGCGGCCAGTGTTATGGTCAGAGAGCTTTGCAATAGGAAT AGGCTATTGGATGCTTGCTACTGGATAGGAGTCATGGAAGAGAACGGGGTGCTCTGTGAC ACTGATGTCTACAATGGTTTGTTGCTTAGGCTGTGTGTGGAAGGGCATGTTGGTGAGGCC TTGGCGTTGGCTAAGAAGGTTGCTGAGAGGGGGATTCTCATAGAGGCTTCTTGTGCTGAT CGTTTGATGGATTTGCTAAAGCAATATGGTGATGAGGAGCTAGCACCAAAAATATCAGAA CTGAGGAGGTGCTCTGAAGTGCTGTCACATTAA

Peptide Sequence

PEP ID	Os03t0225300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6563392:6565219:-1 gene:Os03g0225300 transcript:Os03t0225300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0225300-01)
Sequence	MPQRRPRLAPLTRRLSTCRDGDLAALLSVLRSPPASSTSLPRALSSAFPSPSDSFPLGKL PSLLPLLPSPLLSLRFLLWRLPPSSPLPSSYALSSLAASLPDLPSAVPLLLSSSPQPLPL RHYALLLGISAHAGLFPASLALLRHMRSFGLAPDAACFRSALRSAGSPGDVCAVLGIMSA CGVSPSVPLVVTSVHKLATAGDFVGARQLIEKMPEFGCVTNVAVYTALLDGMCSFGDVDA ALRLVEEMEGWSLGAGCVPNVVSYTCLVKCLCGKKRMGEALSLLDRMTGRGVMPNRVFVR TLVGGFCSEEMVADAYAVVERVVSDGSVSSDQCYNVLLICLWRVGMDGEAEGLVQRMMKK GVRLSPLAASVMVRELCNRNRLLDACYWIGVMEENGVLCDTDVYNGLLLRLCVEGHVGEA LALAKKVAERGILIEASCADRLMDLLKQYGDEELAPKISELRRCSEVLSH

Transcript Sequence

Transcript ID	Os03t0225300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6563392:6565219:-1 gene:Os03g0225300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0225300-01)
Sequence	GCCTTTCCGCAGAGGAGCGCGATCCCCCACCCCAAACCGGCACGGGATGCCTCAGCGGCG GCCGCGCCTGGCGCCCCTCACCCGCCGCCTCTCCACCTGCCGGGACGGCGACCTCGCCGC CCTCCTCTCGGTCCTCCGCTCGCCGCCAGCATCCTCCACGTCGCTCCCGCGCGCACTCTC CAGTGCCTTCCCGTCCCCATCCGACTCCTTCCCCCTCGGCAAGCTCCCCTCCCTCCTCCC GCTCCTCCCCTCCCCACTCCTCTCCCTCCGGTTCCTCCTGTGGCGCCTTCCCCCCTCCTC GCCGCTCCCGTCCTCGTACGCCCTCTCCTCGCTCGCCGCCTCGCTCCCCGATCTCCCGTC CGCCGTGCCCCTCCTCCTCTCCTCGTCGCCGCAACCTCTCCCGCTCAGGCACTACGCCCT CCTCCTGGGCATCTCCGCACACGCTGGACTATTCCCCGCCTCCCTCGCTCTCCTGCGGCA CATGCGCTCCTTCGGCCTCGCCCCCGATGCTGCTTGCTTCCGCTCCGCCCTCCGCTCGGC CGGCTCTCCCGGCGATGTCTGTGCCGTTCTCGGTATCATGTCGGCGTGCGGTGTCTCGCC GAGCGTCCCACTGGTTGTGACCTCGGTGCATAAGCTGGCAACCGCGGGGGACTTCGTCGG TGCCCGCCAGCTGATCGAGAAAATGCCGGAGTTTGGGTGCGTGACCAATGTGGCCGTGTA CACCGCGTTGCTCGACGGGATGTGCAGTTTCGGGGATGTGGATGCAGCGCTGAGGCTGGT GGAAGAGATGGAGGGTTGGAGCTTGGGTGCAGGGTGCGTGCCCAACGTGGTGTCGTATAC GTGTTTGGTGAAATGCCTGTGTGGGAAAAAGAGGATGGGGGAGGCGCTGAGCTTGCTGGA TAGGATGACAGGAAGAGGGGTGATGCCCAACCGGGTGTTCGTGCGAACGCTCGTCGGCGG ATTCTGTTCAGAGGAGATGGTCGCAGACGCTTATGCTGTAGTGGAGCGTGTGGTCAGCGA TGGGAGTGTGTCGAGCGACCAATGCTACAATGTGCTGCTTATTTGCCTGTGGAGGGTTGG GATGGATGGTGAAGCTGAAGGGCTTGTGCAGAGGATGATGAAGAAAGGGGTGCGGCTGAG CCCTCTTGCGGCCAGTGTTATGGTCAGAGAGCTTTGCAATAGGAATAGGCTATTGGATGC TTGCTACTGGATAGGAGTCATGGAAGAGAACGGGGTGCTCTGTGACACTGATGTCTACAA TGGTTTGTTGCTTAGGCTGTGTGTGGAAGGGCATGTTGGTGAGGCCTTGGCGTTGGCTAA GAAGGTTGCTGAGAGGGGGATTCTCATAGAGGCTTCTTGTGCTGATCGTTTGATGGATTT GCTAAAGCAATATGGTGATGAGGAGCTAGCACCAAAAATATCAGAACTGAGGAGGTGCTC TGAAGTGCTGTCACATTAACCAATGTGTGATCCGAACCCTCCTACAAGTATCATGCTTGG TTGATTTCAAATCAAGAAAAATGCTTCCGTGCTGCATGATTACAGCAAGAAAAGGCTTTG AGGGTTTGTTACGCTGAAATAGATTGGTGGGGATAGGGTGCAGCACAGAGTGATTTGTGT GAGCAAAATGTGGATGAGTTACTTCATTTACTTGCCCATTTCCTGTAGTTTTTCTGAACT CTGTTCAGATCCTCCAGTCCAAGGGATGCTTCAGGACATGTGAACTATGATTGCGATGGA ATTCTCAGGTTCCTCATTAGTATGCTCCCAAACAGATATGTTTGTTTAAGTGGTGATCAA TCAAATGTTTTACATTTTTAAAGAACAC