Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0224300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6519054:6522132:-1 gene:Os03g0224300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 4 description:HAD-superfamily hydrolase subfamily IIB protein. (Os03t0224300-01)
Sequence	GAGTTCATCTACATCGGCTGCCTCCGCGACGACATCCCGCTGGCCGACCAGGACGCCGTC GCGCAGGCGCTCCTCGAGTCGTACAACTGCGTGCCGGCGTTCCTGCCCCCCGACATCGCC GAGCGCTACTACCATGGCTTCTGCAAGCAGCATCTGTGGCCGCTGTTCCACTACATGCTG CCGCTCTCCCCCGACCTCGGCGGCCGCTTCGACCGCGCGCTGTGGCAGTCGTACGTGTCG GCGAACAAGATCTTCGCGGACAAGGTGCTCGAGGTGATCAACCCGGACGACGACTTCGTG TGGGTGCACGACTACCACCTCATGGTGCTCCCAACCTTCCTCCGCAAGCGCTTCAACCGC ATCAAGCTCGGCTTCTTCCTCCACTCGCCGTTCCCCTCGTCGGAGATCTACAAGACGCTC CCCGTCCGGGAGGAGCTCCTGCGCGCGCTGCTCAACTCCGACCTCATCGGCTTCCACACC TTCGACTACGCGCGCCACTTCCTCTCCTGCTGCGGCCGGATGCTGGGGCTCTCCTACGAG TCCAAGCGTGGCCACATCTGCTTGGAGTACTACGGCCGGACGGTGAGCATCAAGATCCTC CCGGTGGGGGTGAACATGGGGCAGCTCAAGACGGTGCTCGCGTTGCCGGAGACGGAGGCG AAGGTGGCAGAGCTGATGGCGACTTACTCCGGGAAGGGGAGGGTCGTCATGCTGGGCGTC GACGACATGGACATCTTCAAGGGGATCAGCCTCAAGCTGCTCGCCATGGAGGAGCTGCTG CGGCAGCACCCCGAGTGGCGCGGCAAGCTGGTGCTCGTCCAGGTCGCGAACCCGGCGCGC GGCCGCGGCAAGGACGTCGACGAGGTGAAGGGGGAGACGTACGCCATGGTGCGGCGGATC AACGAGGCGTACGGCGCGCCCGGGTACGAGCCGGTGGTGCTCATCGACGAGCCGCTCCAG TTCTACGAGCGCGTGGCGTACTACGTCGTCGCCGAGGTGTGCCTGGTGACCGCGGTCCGC GACGGCATGAACCTGATCCCCTACGAGTACATCGTGTCCAGGCAGGGCAACGAGGCGCTC GACAGGATGCTGCAGCCGAGCAAGCCGGAGGAGAAGAAGAGCATGCTGGTGGTGTCCGAG TTCATCGGGTGCTCGCCGTCGCTGAGCGGCGCGGTGAGGGTGAACCCGTGGAACATCGAG GCCGTGGCGGACGCCATGGAGAGCGCGCTCGTGCTGCCGGAGAAGGAGAAGCGGATGCGC CACGACAAGCACTACCGCTACGTGGACACCCACGACGTGGGCTACTGGGCGACCAGCTTC CTGCAGGACCTCGAGAGGACGTGCAAGGATCACGCGCAGCGGCGGTGCTGGGGCATCGGC TTCGGGCTGCGGTTCAGGGTGGTGTCGCTTGACCTCAGCTTCAGGAAGCTCGCCATGGAG CACATTGTCATGGCGTACCGGAGGGCGAAGACGCGCGCCATCCTGCTCGACTACGACGGC ACGCTCATGCCGCAGGCGATCAACAAGAGCCCGAGCGCCAATTCCGTCGAAACGCTGACC AGCTTGTGCAGGGACAAGAGCAACAAGGTTTTCCTCTGCAGCGGGTTCGAGAAGGGAACA CTCCATGACTGGTTCCCCTGCGAGAACCTTGGCTTGGCGGCTGAGCACGGTTACTTCCTG AGGTCATCGAGGGATGCAGAGTGGGAGATTTCCATTCCCCCCGCGGACTGCAGCTGGAAG CAGATCGCGGAGCCGGTGATGTGCCTGTACAGGGAGACCACGGACGGCTCGATCATCGAG AACAGGGAGACGGTGCTCGTCTGGAACTACGAGGACGCAGACCCTGACTTCGGTTCATGC CAAGCCAAGGAGCTCGTCGACCACCTCGAGAGCGTGCTCGCCAACGAGCCCGTCTCGGTG AAGAGCACCGGCCATTCCGTTGAGGTCAAGCCACAGGGCGTGAGCAAGGGCCTGGTGGCG CGGCGGCTGCTGGCGAGCATGCAGGAGAGGGGCATGTGCACCGACTTCGTGCTGTGCATC GGGGACGACCGCTCCGACGAGGAAATGTTCCAGATGATCACAAGCTCCACCTGCGGCGAG TCGCTGGCGGCCACGGCGGAGGTCTTCGCCTGCACCGTCGGCCGCAAGCCGAGCAAGGCC AAGTACTACCTCGACGACACGGCGGAGGTCGTCAGGCTGATGCAGGGCTTGGCCTCCGTC TCCAACGAGCTGGCTCGGGCGGCGAGCCCCCCGGAGGACGACGACGAATGA

Peptide Sequence

PEP ID	Os03t0224300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6519054:6522132:-1 gene:Os03g0224300 transcript:Os03t0224300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 4 description:HAD-superfamily hydrolase subfamily IIB protein. (Os03t0224300-01)
Sequence	EFIYIGCLRDDIPLADQDAVAQALLESYNCVPAFLPPDIAERYYHGFCKQHLWPLFHYML PLSPDLGGRFDRALWQSYVSANKIFADKVLEVINPDDDFVWVHDYHLMVLPTFLRKRFNR IKLGFFLHSPFPSSEIYKTLPVREELLRALLNSDLIGFHTFDYARHFLSCCGRMLGLSYE SKRGHICLEYYGRTVSIKILPVGVNMGQLKTVLALPETEAKVAELMATYSGKGRVVMLGV DDMDIFKGISLKLLAMEELLRQHPEWRGKLVLVQVANPARGRGKDVDEVKGETYAMVRRI NEAYGAPGYEPVVLIDEPLQFYERVAYYVVAEVCLVTAVRDGMNLIPYEYIVSRQGNEAL DRMLQPSKPEEKKSMLVVSEFIGCSPSLSGAVRVNPWNIEAVADAMESALVLPEKEKRMR HDKHYRYVDTHDVGYWATSFLQDLERTCKDHAQRRCWGIGFGLRFRVVSLDLSFRKLAME HIVMAYRRAKTRAILLDYDGTLMPQAINKSPSANSVETLTSLCRDKSNKVFLCSGFEKGT LHDWFPCENLGLAAEHGYFLRSSRDAEWEISIPPADCSWKQIAEPVMCLYRETTDGSIIE NRETVLVWNYEDADPDFGSCQAKELVDHLESVLANEPVSVKSTGHSVEVKPQGVSKGLVA RRLLASMQERGMCTDFVLCIGDDRSDEEMFQMITSSTCGESLAATAEVFACTVGRKPSKA KYYLDDTAEVVRLMQGLASVSNELARAASPPEDDDE

Transcript Sequence

Transcript ID	Os03t0224300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6519054:6522132:-1 gene:Os03g0224300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 4 description:HAD-superfamily hydrolase subfamily IIB protein. (Os03t0224300-01)
Sequence	GGAGTTCATCTACATCGGCTGCCTCCGCGACGACATCCCGCTGGCCGACCAGGACGCCGT CGCGCAGGCGCTCCTCGAGTCGTACAACTGCGTGCCGGCGTTCCTGCCCCCCGACATCGC CGAGCGCTACTACCATGGCTTCTGCAAGCAGCATCTGTGGCCGCTGTTCCACTACATGCT GCCGCTCTCCCCCGACCTCGGCGGCCGCTTCGACCGCGCGCTGTGGCAGTCGTACGTGTC GGCGAACAAGATCTTCGCGGACAAGGTGCTCGAGGTGATCAACCCGGACGACGACTTCGT GTGGGTGCACGACTACCACCTCATGGTGCTCCCAACCTTCCTCCGCAAGCGCTTCAACCG CATCAAGCTCGGCTTCTTCCTCCACTCGCCGTTCCCCTCGTCGGAGATCTACAAGACGCT CCCCGTCCGGGAGGAGCTCCTGCGCGCGCTGCTCAACTCCGACCTCATCGGCTTCCACAC CTTCGACTACGCGCGCCACTTCCTCTCCTGCTGCGGCCGGATGCTGGGGCTCTCCTACGA GTCCAAGCGTGGCCACATCTGCTTGGAGTACTACGGCCGGACGGTGAGCATCAAGATCCT CCCGGTGGGGGTGAACATGGGGCAGCTCAAGACGGTGCTCGCGTTGCCGGAGACGGAGGC GAAGGTGGCAGAGCTGATGGCGACTTACTCCGGGAAGGGGAGGGTCGTCATGCTGGGCGT CGACGACATGGACATCTTCAAGGGGATCAGCCTCAAGCTGCTCGCCATGGAGGAGCTGCT GCGGCAGCACCCCGAGTGGCGCGGCAAGCTGGTGCTCGTCCAGGTCGCGAACCCGGCGCG CGGCCGCGGCAAGGACGTCGACGAGGTGAAGGGGGAGACGTACGCCATGGTGCGGCGGAT CAACGAGGCGTACGGCGCGCCCGGGTACGAGCCGGTGGTGCTCATCGACGAGCCGCTCCA GTTCTACGAGCGCGTGGCGTACTACGTCGTCGCCGAGGTGTGCCTGGTGACCGCGGTCCG CGACGGCATGAACCTGATCCCCTACGAGTACATCGTGTCCAGGCAGGGCAACGAGGCGCT CGACAGGATGCTGCAGCCGAGCAAGCCGGAGGAGAAGAAGAGCATGCTGGTGGTGTCCGA GTTCATCGGGTGCTCGCCGTCGCTGAGCGGCGCGGTGAGGGTGAACCCGTGGAACATCGA GGCCGTGGCGGACGCCATGGAGAGCGCGCTCGTGCTGCCGGAGAAGGAGAAGCGGATGCG CCACGACAAGCACTACCGCTACGTGGACACCCACGACGTGGGCTACTGGGCGACCAGCTT CCTGCAGGACCTCGAGAGGACGTGCAAGGATCACGCGCAGCGGCGGTGCTGGGGCATCGG CTTCGGGCTGCGGTTCAGGGTGGTGTCGCTTGACCTCAGCTTCAGGAAGCTCGCCATGGA GCACATTGTCATGGCGTACCGGAGGGCGAAGACGCGCGCCATCCTGCTCGACTACGACGG CACGCTCATGCCGCAGGCGATCAACAAGAGCCCGAGCGCCAATTCCGTCGAAACGCTGAC CAGCTTGTGCAGGGACAAGAGCAACAAGGTTTTCCTCTGCAGCGGGTTCGAGAAGGGAAC ACTCCATGACTGGTTCCCCTGCGAGAACCTTGGCTTGGCGGCTGAGCACGGTTACTTCCT GAGGTCATCGAGGGATGCAGAGTGGGAGATTTCCATTCCCCCCGCGGACTGCAGCTGGAA GCAGATCGCGGAGCCGGTGATGTGCCTGTACAGGGAGACCACGGACGGCTCGATCATCGA GAACAGGGAGACGGTGCTCGTCTGGAACTACGAGGACGCAGACCCTGACTTCGGTTCATG CCAAGCCAAGGAGCTCGTCGACCACCTCGAGAGCGTGCTCGCCAACGAGCCCGTCTCGGT GAAGAGCACCGGCCATTCCGTTGAGGTCAAGCCACAGGGCGTGAGCAAGGGCCTGGTGGC GCGGCGGCTGCTGGCGAGCATGCAGGAGAGGGGCATGTGCACCGACTTCGTGCTGTGCAT CGGGGACGACCGCTCCGACGAGGAAATGTTCCAGATGATCACAAGCTCCACCTGCGGCGA GTCGCTGGCGGCCACGGCGGAGGTCTTCGCCTGCACCGTCGGCCGCAAGCCGAGCAAGGC CAAGTACTACCTCGACGACACGGCGGAGGTCGTCAGGCTGATGCAGGGCTTGGCCTCCGT CTCCAACGAGCTGGCTCGGGCGGCGAGCCCCCCGGAGGACGACGACGAATGAGCACCCAT AGGGCGCGCGAGGCGTGCCATGGAAAGGATTAGGCAGTGCGGTGCACCGGAGAGCCTCGT TTAGTTCCCCCCGGTTTGAGCGTTTGATGGGTCGTAGTTGCTAGTTAGGTGTACATGATT TCCTATGATTCTTCAGGGTATTGTACCGTACGGAGTAGTGATTTAGTCCTTGGTTAGAGC ATCATGAATTGGTTTGTCATCAGTAAGAGAGTATTATTGATCTAGTAAAGCTCGGGTTAC CGCAACAATTATCATATTTTTCTCCGAGCAACACGTGATCTAGTGTTGAACTATATCTCG ACAAATCTGCTGCTTAATCAATGCATGGTCCTTCATCTGGAGC