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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0224200-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:6515664:6518426:1 gene:Os03g0224200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 1 description:B-type response regulator, Cytokinin signaling (Os03t0224200-01);B-type response regulator, Cytokinin signaling (Os03t0224200-02);Similar to response regulator 8. (Os03t0224200-03)
Sequence

GCTGTTCCCAAGAAAATTTTGGAGTTGATGAATGTTCCTGGTTTAACTAGGGAAAATGTC
GCCAGCCATTTGCAGAAGTTCAGATTGTATCTGAAGAGGATTGCTCAGCATCATGCCGGA
ATAGCTAATCCATTCTGCCCGCCTGCTTCTAGTGGTAAAGTAGGCTCACTGGGAGGACTT
GATTTCCAAGCTTTGGCTGCCTCAGGTCAGATCCCTCCTCAAGCCCTGGCCGCCTTGCAG
GATGAGCTCCTAGGGCGACCTACAAATAGTTTGGTATTGCCTGGAAGGGACCAGTCATCT
TTACGGCTTGCTGCAGTCAAAGGAAACAAGCCCCATGGGGAGAGAGAAATAGCATTTGGT
CAACCTATATACAAGTGCCAGAATAATGCATATGGGGCATTCCCTCAAAGCAGTCCAGCT
GTTGGAGGAATGCCTTCATTTTCAGCTTGGCCCAATAACAAACTTGGTATGGCAGACTCA
ACCGGCACATTGGGAGGCATGAGTAATTCTCAGAATAGCAATATAGTCTTGCATGAATTG
CAACAGCAGCCAGATGCCATGCTGTCAGGAACCCTTCACTCTCTAGATGTCAAACCTTCT
GGGATAGTTATGCCTTCTCAGTCATTAAATACTTTCTCAGCCAGTGAGGGTCTCTCCCCT
AATCAAAATACCTTGATGATACCTGCTCAGTCATCTGGTTTTCTAGCGGCCATGCCTCCA
TCCATGAAGCATGAACCTGTTCTTGCAACTTCTCAACCATCGAGTAGTCTGTTAGGTGGT
ATTGATTTGGTTAATCAAGCTTCAACAAGTCAGCCCTTAATAAGTGCCCATGGAGGGGGG
AATCTTTCTGGCCTTGTAAATCGTAATCCAAATGTAGTACCTTCTCAAGGGATCAGTACT
TTTCATACTCCAAATAATCCATATTTGGTTAGTCCAAATTCTATGGGAATGGGCTCCAAA
CAACCACCTGGTGTTCTTAAGACAGAAAACTCTGACGCTCTGAACCATAGCTATGGTTAT
CTTGGTGGTAGCAACCCCCCTATGGACTCTGGCTTACTCTCTTCACAATCAAAAAATACA
CAGTTTGGTTTACTGGGTCAGGATGACATCACTGGTAGCTGGTCGCCTCTGCCGAATGTT
GACAGTTATGGTAATACTGTTGGGCTAAGCCACCCTGGGTCCAGTTCATCTAGTTTTCAA
AGTTCTAATGTGGCTCTTGGGAAATTGCCTGATCAAGGGCGAGGAAAGAATCATGGATTT
GTTGGTAAAGGTACTTGCATTCCAAGCCGCTTTGCAGTGGATGAGATTGAATCTCCAACT
AACAACTTGAGTCACAGCATTGGAAGCAGTGGAGATATTATGAGCCCTGATATTTTCGGA
TTTAGTGGACAGATGTGA

Peptide Sequence

PEP ID

Os03t0224200-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:6515664:6518426:1 gene:Os03g0224200 transcript:Os03t0224200-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 1 description:B-type response regulator, Cytokinin signaling (Os03t0224200-01);B-type response regulator, Cytokinin signaling (Os03t0224200-02);Similar to response regulator 8. (Os03t0224200-03)
Sequence

AVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQHHAGIANPFCPPASSGKVGSLGGL
DFQALAASGQIPPQALAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNKPHGEREIAFG
QPIYKCQNNAYGAFPQSSPAVGGMPSFSAWPNNKLGMADSTGTLGGMSNSQNSNIVLHEL
QQQPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSASEGLSPNQNTLMIPAQSSGFLAAMPP
SMKHEPVLATSQPSSSLLGGIDLVNQASTSQPLISAHGGGNLSGLVNRNPNVVPSQGIST
FHTPNNPYLVSPNSMGMGSKQPPGVLKTENSDALNHSYGYLGGSNPPMDSGLLSSQSKNT
QFGLLGQDDITGSWSPLPNVDSYGNTVGLSHPGSSSSSFQSSNVALGKLPDQGRGKNHGF
VGKGTCIPSRFAVDEIESPTNNLSHSIGSSGDIMSPDIFGFSGQM

Transcript Sequence

Transcript ID

Os03t0224200-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:6515664:6518426:1 gene:Os03g0224200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 1 description:B-type response regulator, Cytokinin signaling (Os03t0224200-01);B-type response regulator, Cytokinin signaling (Os03t0224200-02);Similar to response regulator 8. (Os03t0224200-03)
Sequence

AAGCTGTTCCCAAGAAAATTTTGGAGTTGATGAATGTTCCTGGTTTAACTAGGGAAAATG
TCGCCAGCCATTTGCAGAAGTTCAGATTGTATCTGAAGAGGATTGCTCAGCATCATGCCG
GAATAGCTAATCCATTCTGCCCGCCTGCTTCTAGTGGTAAAGTAGGCTCACTGGGAGGAC
TTGATTTCCAAGCTTTGGCTGCCTCAGGTCAGATCCCTCCTCAAGCCCTGGCCGCCTTGC
AGGATGAGCTCCTAGGGCGACCTACAAATAGTTTGGTATTGCCTGGAAGGGACCAGTCAT
CTTTACGGCTTGCTGCAGTCAAAGGAAACAAGCCCCATGGGGAGAGAGAAATAGCATTTG
GTCAACCTATATACAAGTGCCAGAATAATGCATATGGGGCATTCCCTCAAAGCAGTCCAG
CTGTTGGAGGAATGCCTTCATTTTCAGCTTGGCCCAATAACAAACTTGGTATGGCAGACT
CAACCGGCACATTGGGAGGCATGAGTAATTCTCAGAATAGCAATATAGTCTTGCATGAAT
TGCAACAGCAGCCAGATGCCATGCTGTCAGGAACCCTTCACTCTCTAGATGTCAAACCTT
CTGGGATAGTTATGCCTTCTCAGTCATTAAATACTTTCTCAGCCAGTGAGGGTCTCTCCC
CTAATCAAAATACCTTGATGATACCTGCTCAGTCATCTGGTTTTCTAGCGGCCATGCCTC
CATCCATGAAGCATGAACCTGTTCTTGCAACTTCTCAACCATCGAGTAGTCTGTTAGGTG
GTATTGATTTGGTTAATCAAGCTTCAACAAGTCAGCCCTTAATAAGTGCCCATGGAGGGG
GGAATCTTTCTGGCCTTGTAAATCGTAATCCAAATGTAGTACCTTCTCAAGGGATCAGTA
CTTTTCATACTCCAAATAATCCATATTTGGTTAGTCCAAATTCTATGGGAATGGGCTCCA
AACAACCACCTGGTGTTCTTAAGACAGAAAACTCTGACGCTCTGAACCATAGCTATGGTT
ATCTTGGTGGTAGCAACCCCCCTATGGACTCTGGCTTACTCTCTTCACAATCAAAAAATA
CACAGTTTGGTTTACTGGGTCAGGATGACATCACTGGTAGCTGGTCGCCTCTGCCGAATG
TTGACAGTTATGGTAATACTGTTGGGCTAAGCCACCCTGGGTCCAGTTCATCTAGTTTTC
AAAGTTCTAATGTGGCTCTTGGGAAATTGCCTGATCAAGGGCGAGGAAAGAATCATGGAT
TTGTTGGTAAAGGTACTTGCATTCCAAGCCGCTTTGCAGTGGATGAGATTGAATCTCCAA
CTAACAACTTGAGTCACAGCATTGGAAGCAGTGGAGATATTATGAGCCCTGATATTTTCG
GATTTAGTGGACAGATGTGAAGGCTTCTTGAATTTGTAAGTAGGGTAATCACTGGAAACA
ATTTTTAGTGGGTTGATGAACGGTTGCCGTGTTTTTCATTTCATCCTTTTTTTTTTCCTT
CTGTAATTGGTTTATAAAGGGAATAATTTATGTGACAGCATGTCGAATCTTGGTTTATAG
AAGGTTGTTCGGTTTAAACAACTTTGGATT