Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0222600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:6418114:6420549:1 gene:Os03g0222600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to caleosin. (Os03t0222600-01)
Sequence

ATGGCGTCGTCTTCGTCGTCGTCGCCGCCGTCGTCTGACCCGTCCTTGGAGACGGTAGCG
CCGCACGCGGCTGTTACGGGGGAGCGGAAGCTCAACCCCAACCTGCAGGAGCAGCTTCCC
AAGCCATATCTCGCGAGGGCTCTCGCGGCGGTGGACCCGAGCCACCCGCAGGGGACCCGT
GGGCGCGACGCCCGCGGCATGAGCGTGCTCCAGCAGCACGCCGCGTTCTTCGACCGCAAC
GGCGACGGCATCATCTACCCCTGGGAGACCTTCCAAGGGCTGAGAGCGATAGGTTGCGGG
TATCCCGTGTCGATTGCTGGTGCCATACTCATCAACCTCGTCCTCAGCTATCCTACTCAA
CCGGGGTGGATGCCTTCTCCTCTGTTTTCCATCCATATAAAGAACATTCACAAGGGTAAG
CATGGGAGTGACTCTGAAGCATATGATACTGAAGGGAGGTTTGATCCATCGAAATTTGAT
GCTATATTCAGCAAGTATGGCAGAACTCATCCAAATGCTTTGACAAAAGATGAGCTGAAC
TCGATGATTAAAGCAAACCGCAATATGTATGATTTCATTGGCTGGATTACTAGCGCTGGT
GAATGGATGCTACTGTACAGCGTGGCCAAGGATAAAGAAGGGCTGTTGCAACGAGAAACT
GTTAGAGGCGCCTTCGATGGCAGCCTGTTTGAGCGACTTCAGGACAGCAAGAAATCTGCT
TGA

Peptide Sequence

PEP ID

Os03t0222600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:6418114:6420549:1 gene:Os03g0222600 transcript:Os03t0222600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to caleosin. (Os03t0222600-01)
Sequence

MASSSSSSPPSSDPSLETVAPHAAVTGERKLNPNLQEQLPKPYLARALAAVDPSHPQGTR
GRDARGMSVLQQHAAFFDRNGDGIIYPWETFQGLRAIGCGYPVSIAGAILINLVLSYPTQ
PGWMPSPLFSIHIKNIHKGKHGSDSEAYDTEGRFDPSKFDAIFSKYGRTHPNALTKDELN
SMIKANRNMYDFIGWITSAGEWMLLYSVAKDKEGLLQRETVRGAFDGSLFERLQDSKKSA

Transcript Sequence

Transcript ID

Os03t0222600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:6418114:6420549:1 gene:Os03g0222600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to caleosin. (Os03t0222600-01)
Sequence

GGATTCCTTCTGTTCGCATTGCCCTGAGAGTTCTAGTTCGATCCCCAACTAAGAGCGTTT
TGTTTTCGTTTTTCTTCTGTTCGTTCGTTCTTTCGATCTGCAGATCCTACAAACTCGCCC
CCCGAATAACCATGGCGTCGTCTTCGTCGTCGTCGCCGCCGTCGTCTGACCCGTCCTTGG
AGACGGTAGCGCCGCACGCGGCTGTTACGGGGGAGCGGAAGCTCAACCCCAACCTGCAGG
AGCAGCTTCCCAAGCCATATCTCGCGAGGGCTCTCGCGGCGGTGGACCCGAGCCACCCGC
AGGGGACCCGTGGGCGCGACGCCCGCGGCATGAGCGTGCTCCAGCAGCACGCCGCGTTCT
TCGACCGCAACGGCGACGGCATCATCTACCCCTGGGAGACCTTCCAAGGGCTGAGAGCGA
TAGGTTGCGGGTATCCCGTGTCGATTGCTGGTGCCATACTCATCAACCTCGTCCTCAGCT
ATCCTACTCAACCGGGGTGGATGCCTTCTCCTCTGTTTTCCATCCATATAAAGAACATTC
ACAAGGGTAAGCATGGGAGTGACTCTGAAGCATATGATACTGAAGGGAGGTTTGATCCAT
CGAAATTTGATGCTATATTCAGCAAGTATGGCAGAACTCATCCAAATGCTTTGACAAAAG
ATGAGCTGAACTCGATGATTAAAGCAAACCGCAATATGTATGATTTCATTGGCTGGATTA
CTAGCGCTGGTGAATGGATGCTACTGTACAGCGTGGCCAAGGATAAAGAAGGGCTGTTGC
AACGAGAAACTGTTAGAGGCGCCTTCGATGGCAGCCTGTTTGAGCGACTTCAGGACAGCA
AGAAATCTGCTTGAATATAGCAATGAGCTGTGCTGCTCGAAGAAAGCGTTGACAGTAAAG
AATCTAATAAGATTAGAAAAAAAAAGGGTCTTTGCTTTGTGTAATTCAAATGAAAAATGT
TAATTACCCCATGACAGTATTTATGATGTTTGCAATGATCACC