Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0221700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:6377414:6380243:1 gene:Os03g0221700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os03t0221700-02)
Sequence	ATGCTCCTCGTCGGCGTCCTCCTGCTGCTCTTCTTCAACCTACATCTCCCCACGGCCGCC ATTGACACCCTCACGCTAGGCCAGTCTCTGCTGTGGAACCAGACGCTGGTCTCCAATGGC GGCAACTTCGAGCTCGGCCTCTTCTCGCCGGGAAAGTCCAACAAGCACTACCTTGGCATC TGGTACAAGAAGATCTCCAAGAAGACGGTTGTTTGGGTTGCCAACCGTGAGCGCCCGATT CTTGAGCCGTCGAGCTGCCACCTCGAGCTGAGCGTCCACGGCGATCTGCGGCTGTTCTCG ACGGCGCCGTCGAACACCTTGCTGTGGTCGTCGAACGCGTCCGCGTCTTCCTCGCCGTCG CCCCCGCGCACCACCGTCGCCACGCTCCAGGACGACGGCAACCTCGTGGTGAACAGCAAC GCGACGCGGTCGCGGTCGCGATCGCCGTCGTCGACTACGACGACGCACGTGGCGTGGCAG AGCTTTGATCACCCGACCGACACATGGCTCCCCGGAGCCAGGCTCGGCTACGACAGGGGC CGCGGCGTCCACAGCTTCCTCACGTCGTGGACGGACTCCGAGAACCCGGCGCCCGGCGCG TTCTCCATGGTGATCGACGCGCGCGGGCTGGCCAAGTTCGACCTCCTCGCCGGCGGCGAG CACCGGTACTGGACGACCGGCCTCTGGGACGGCGAGATCTTCGCGAACGTGCCGGAGATG CGGTCCGGCTACTTCACCGGCGTCCCCTACGCGCCGAACGCCAGCGTCAACTTCTTCAGC TACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATG CGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCAC GACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAAC CCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAG AACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTG GCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGG AACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCAC GACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCT AATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCC CACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTT GGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTG GCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTG CTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGG AGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTC AAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTC GGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAG AGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATG AGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTAC AACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGC ATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGG CTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACC ATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCA AAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAAC AGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCC GTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGAT GCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAG GAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTA ATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGA GGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATA GAAGAAATGTAG

Peptide Sequence

PEP ID	Os03t0221700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:6377414:6380243:1 gene:Os03g0221700 transcript:Os03t0221700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os03t0221700-02)
Sequence	MLLVGVLLLLFFNLHLPTAAIDTLTLGQSLLWNQTLVSNGGNFELGLFSPGKSNKHYLGI WYKKISKKTVVWVANRERPILEPSSCHLELSVHGDLRLFSTAPSNTLLWSSNASASSSPS PPRTTVATLQDDGNLVVNSNATRSRSRSPSSTTTTHVAWQSFDHPTDTWLPGARLGYDRG RGVHSFLTSWTDSENPAPGAFSMVIDARGLAKFDLLAGGEHRYWTTGLWDGEIFANVPEM RSGYFTGVPYAPNASVNFFSYRDRLPGAVGNFMLDVNGQMRRRQWSETAGKWILFCSLPH DACDVYGSCGPFGVCSNATNPECRCPAGFEPRSSEEWRLENAAGGCVRRHPLECHGDGFL ALPYTVRLPNGSVEAPAGAGNDKACAHTCLVDCSCTAYVHDGAKCLVWNGELVNMKAYAA NENGQGDPGLAGAVLHLRVAHSEVPASSTEHSWKKSMVILGSVVAAVVLLLASLVTVVAV AAVLRMRRRRGKVTAVQGSLLLLDYHAVKTATRDFSEKLGSGSFGTVFKGALPDGTPVAV KKLDGLRQGEKQFRTEVVTLGMIQHVNLVRLRGFCCEGNKRALVYDYMANGSLDSHLFVM SGSSSGPDSKQVTLTWSQRYNVAVGVARGLAYLHEKCRECIIHCDVKPENILLDQEMAAR LADFGMAKLVGRDFSSVLTTMRGTVGYLAPEWLAGTPVTAKADVYSFGLLLFELVSGRRN STAPSSSSEGGPGIYFPVHAVVKLNEGDVAGLVDERVAKDADPKEVERLCKVAGWCIQDE EGDRPTMGLVVQQLEGIANVMLPPIPSRLHILAIENEWVRGVPEDERCSKSGSKPETEAI EEM

Transcript Sequence

Transcript ID	Os03t0221700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6377414:6380243:1 gene:Os03g0221700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os03t0221700-02)
Sequence	GCTAAGTAAGTAAGAATTGTGGTTGCCACTCGGCACTCGCCACCATGCTCCTCGTCGGCG TCCTCCTGCTGCTCTTCTTCAACCTACATCTCCCCACGGCCGCCATTGACACCCTCACGC TAGGCCAGTCTCTGCTGTGGAACCAGACGCTGGTCTCCAATGGCGGCAACTTCGAGCTCG GCCTCTTCTCGCCGGGAAAGTCCAACAAGCACTACCTTGGCATCTGGTACAAGAAGATCT CCAAGAAGACGGTTGTTTGGGTTGCCAACCGTGAGCGCCCGATTCTTGAGCCGTCGAGCT GCCACCTCGAGCTGAGCGTCCACGGCGATCTGCGGCTGTTCTCGACGGCGCCGTCGAACA CCTTGCTGTGGTCGTCGAACGCGTCCGCGTCTTCCTCGCCGTCGCCCCCGCGCACCACCG TCGCCACGCTCCAGGACGACGGCAACCTCGTGGTGAACAGCAACGCGACGCGGTCGCGGT CGCGATCGCCGTCGTCGACTACGACGACGCACGTGGCGTGGCAGAGCTTTGATCACCCGA CCGACACATGGCTCCCCGGAGCCAGGCTCGGCTACGACAGGGGCCGCGGCGTCCACAGCT TCCTCACGTCGTGGACGGACTCCGAGAACCCGGCGCCCGGCGCGTTCTCCATGGTGATCG ACGCGCGCGGGCTGGCCAAGTTCGACCTCCTCGCCGGCGGCGAGCACCGGTACTGGACGA CCGGCCTCTGGGACGGCGAGATCTTCGCGAACGTGCCGGAGATGCGGTCCGGCTACTTCA CCGGCGTCCCCTACGCGCCGAACGCCAGCGTCAACTTCTTCAGCTACCGCGACCGGCTGC CGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGA GCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGT ACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCC CCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCT GCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCG TGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCG CGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCC TCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAG GCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGG CGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGG CGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGA TGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACC ATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCA CGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTC TCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACG TCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACG ACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCG GCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTG TGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACG TCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCA TGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGG GATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCAAAAGCCGACGTGTACA GCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGT CGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACG AAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGG TTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGA CCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCC CTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATG AGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACT GAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATG TAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTG CAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGT TTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAGCTGCACCTTTATTGAAGAAATC CATTAGTGCT