Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0221300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6358095:6364239:-1 gene:Os03g0221300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 57 description:Similar to No apical meristem protein, expressed. (Os03t0221300-01)
Sequence	AAGATATTCTACGAGTTAGAAAAAAATCAATTTAAATGGGCTGAGAAATCTCACGCTCAG TCAGCACAGGGTGCTTCTGCAATCGATGATGATTCCAAAGAGGAATTACAGTTGGACAAT CATTCTTTTAATATGATTACTGAAAATAGTTCTGTTCAAGGCAATGAAAACAAGCAAAAG CAGACGCAAACAGGGACATGTCCTAATCTGGACAAACTAAGTTATTTCAATGTGGTAAGC AACATGCATATTGGGAACCAAATTAATGATCATGATGAAATCGAGGAGCTTGATCATATG TCTCTGCAAGAGCGCTACAGAATTCTTATGGCAGAAAATCATTCTTCCTCTGCTGTAGTA TCTTCTGAACAATGTGCAATTGATGGTTTGGAGAATTCATGCAAGCCTGGAACTAATGGG ATGATTCCTAAAAGAATTCATGAAGGGACTGCCTTCAGGGATGGTATGTATAGCATGTTG CAGGAAATTTCTTCTGCACCGGCCATTATAGGTAGTATCGACAATGATAACAACAGGAGG TTGCTAACTGAAGGTCTTTCAAACAACCAGCAAAGTCATGAGGCTGGATGTGAATCAGGT TTCTTGAGTACATCATCTTCTGCTGCTCCACCACAATGTCAAGTTGTGTGCTCTCATGAT CTATTGGTAAACGGCAAGACTCTTATTTATAGTCGCGACCCTTCTTCAAGTTCAACACCA ACTTTTGGGGATAAAAACATTCAGTTGGAAGGGACAGATGATAGGACCCTTTTGGTTGAC ATAAAATTGGAACCTGCATTGGAAGGGGATTTCACAGAGAAAATTACATCTTCTGTACAG AGAACAGATCCAAATCATGGCACTGAGGGCTCTAATCTAGTTGGGTCTATAAACTCTGTT TCTTCAGCGATCTCCAAAAGAATATCAGAAGCAGCAAGATCTAACCCAGAGAATTCTCAT GTTGAAGGCCTACTGCCATCATCACGAATAAAAAGCGAAGTTACCGGGAGTGAGTTACCT CTAGTTGTGTGTGGTCTCACTTCTATCAGTATCGCAGAGCTCACTGCCAAAAAAACCAAT ACTCTAAACCATGACGGGGTCCTTGCTTACTGTTCTCGAAAAAGGAAAAGGAGGAAGACT CTGAGGGATCCAAGTGAAAAGACGCTTGAAGAAGATTCCCTCAGAAATGATGAGGGTACT GCTTACTTTTCTCGTCAAAGGCGAAGGAGAAAAACAGCAACGGATTCAATTGAAACGGCA CTTGAAGAAGATGCCCCAGGACTACTGCAGATTCTTCTGGACAAAGGAATACTGGTTAAA GAGATTAAACTCTACGGTGTTGAAGAAGAAGATGATATGGTCCCAGACTGCACAGAAAGT GACTTTCAAGATCTTGAAAATGTTATTACAAAATTGTTTCCGCAAAGAACATCCCTGTTG AAATCTGCACTTAGGCATGAGAAGGGGGAAAAGGCTATATACTGCTTGACCTGTTTAATT TCTCTCATCGAGCAGTCCCGCTATCTTCAGTTTCGTGATTGTCCTGTTGAATGGGGATGG TGTAGAGACCTGCAATCATTTATTTTTATTTTTAAAAGCCATAACAGGATTGTTCTTGAG CGACCGGAATATGGGTATGCGACATACTTCTTTGAGATTGTGAAATCACTGCCAATACAA TGGCAGATCCAAAGGATGGTTACTGCAATGAAGCTTAGTGGTTGTGGCAGGACAGCTCTG ATTGAAAATAGGCCATTATTGATTGGTGAAGATTTGACGGAAGGAGAGGCGCGGGTTTTG GAAGAATATGGTTGGGTACCAAATTCTGGGCTTGGCACAATGCTCAATTACCGTGACCGG GTAGTTCATGACAGGTGGAACGAGAGATCTGGCACAGATTGGAAGACAAAGATAGGAAAG CTCCTGATGAATGGGTATTCCGAGGGGCATTTGGTCCTATCTCACTTTCCAACTAAAGTT GGGAAAATAGAAGATGACACCGAAATCAAACAGGAGGATCCTCTCTGA

Peptide Sequence

PEP ID	Os03t0221300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6358095:6364239:-1 gene:Os03g0221300 transcript:Os03t0221300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 57 description:Similar to No apical meristem protein, expressed. (Os03t0221300-01)
Sequence	KIFYELEKNQFKWAEKSHAQSAQGASAIDDDSKEELQLDNHSFNMITENSSVQGNENKQK QTQTGTCPNLDKLSYFNVVSNMHIGNQINDHDEIEELDHMSLQERYRILMAENHSSSAVV SSEQCAIDGLENSCKPGTNGMIPKRIHEGTAFRDGMYSMLQEISSAPAIIGSIDNDNNRR LLTEGLSNNQQSHEAGCESGFLSTSSSAAPPQCQVVCSHDLLVNGKTLIYSRDPSSSSTP TFGDKNIQLEGTDDRTLLVDIKLEPALEGDFTEKITSSVQRTDPNHGTEGSNLVGSINSV SSAISKRISEAARSNPENSHVEGLLPSSRIKSEVTGSELPLVVCGLTSISIAELTAKKTN TLNHDGVLAYCSRKRKRRKTLRDPSEKTLEEDSLRNDEGTAYFSRQRRRRKTATDSIETA LEEDAPGLLQILLDKGILVKEIKLYGVEEEDDMVPDCTESDFQDLENVITKLFPQRTSLL KSALRHEKGEKAIYCLTCLISLIEQSRYLQFRDCPVEWGWCRDLQSFIFIFKSHNRIVLE RPEYGYATYFFEIVKSLPIQWQIQRMVTAMKLSGCGRTALIENRPLLIGEDLTEGEARVL EEYGWVPNSGLGTMLNYRDRVVHDRWNERSGTDWKTKIGKLLMNGYSEGHLVLSHFPTKV GKIEDDTEIKQEDPL

Transcript Sequence

Transcript ID	Os03t0221300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6358095:6364239:-1 gene:Os03g0221300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 57 description:Similar to No apical meristem protein, expressed. (Os03t0221300-01)
Sequence	CAAAGATATTCTACGAGTTAGAAAAAAATCAATTTAAATGGGCTGAGAAATCTCACGCTC AGTCAGCACAGGGTGCTTCTGCAATCGATGATGATTCCAAAGAGGAATTACAGTTGGACA ATCATTCTTTTAATATGATTACTGAAAATAGTTCTGTTCAAGGCAATGAAAACAAGCAAA AGCAGACGCAAACAGGGACATGTCCTAATCTGGACAAACTAAGTTATTTCAATGTGGTAA GCAACATGCATATTGGGAACCAAATTAATGATCATGATGAAATCGAGGAGCTTGATCATA TGTCTCTGCAAGAGCGCTACAGAATTCTTATGGCAGAAAATCATTCTTCCTCTGCTGTAG TATCTTCTGAACAATGTGCAATTGATGGTTTGGAGAATTCATGCAAGCCTGGAACTAATG GGATGATTCCTAAAAGAATTCATGAAGGGACTGCCTTCAGGGATGGTATGTATAGCATGT TGCAGGAAATTTCTTCTGCACCGGCCATTATAGGTAGTATCGACAATGATAACAACAGGA GGTTGCTAACTGAAGGTCTTTCAAACAACCAGCAAAGTCATGAGGCTGGATGTGAATCAG GTTTCTTGAGTACATCATCTTCTGCTGCTCCACCACAATGTCAAGTTGTGTGCTCTCATG ATCTATTGGTAAACGGCAAGACTCTTATTTATAGTCGCGACCCTTCTTCAAGTTCAACAC CAACTTTTGGGGATAAAAACATTCAGTTGGAAGGGACAGATGATAGGACCCTTTTGGTTG ACATAAAATTGGAACCTGCATTGGAAGGGGATTTCACAGAGAAAATTACATCTTCTGTAC AGAGAACAGATCCAAATCATGGCACTGAGGGCTCTAATCTAGTTGGGTCTATAAACTCTG TTTCTTCAGCGATCTCCAAAAGAATATCAGAAGCAGCAAGATCTAACCCAGAGAATTCTC ATGTTGAAGGCCTACTGCCATCATCACGAATAAAAAGCGAAGTTACCGGGAGTGAGTTAC CTCTAGTTGTGTGTGGTCTCACTTCTATCAGTATCGCAGAGCTCACTGCCAAAAAAACCA ATACTCTAAACCATGACGGGGTCCTTGCTTACTGTTCTCGAAAAAGGAAAAGGAGGAAGA CTCTGAGGGATCCAAGTGAAAAGACGCTTGAAGAAGATTCCCTCAGAAATGATGAGGGTA CTGCTTACTTTTCTCGTCAAAGGCGAAGGAGAAAAACAGCAACGGATTCAATTGAAACGG CACTTGAAGAAGATGCCCCAGGACTACTGCAGATTCTTCTGGACAAAGGAATACTGGTTA AAGAGATTAAACTCTACGGTGTTGAAGAAGAAGATGATATGGTCCCAGACTGCACAGAAA GTGACTTTCAAGATCTTGAAAATGTTATTACAAAATTGTTTCCGCAAAGAACATCCCTGT TGAAATCTGCACTTAGGCATGAGAAGGGGGAAAAGGCTATATACTGCTTGACCTGTTTAA TTTCTCTCATCGAGCAGTCCCGCTATCTTCAGTTTCGTGATTGTCCTGTTGAATGGGGAT GGTGTAGAGACCTGCAATCATTTATTTTTATTTTTAAAAGCCATAACAGGATTGTTCTTG AGCGACCGGAATATGGGTATGCGACATACTTCTTTGAGATTGTGAAATCACTGCCAATAC AATGGCAGATCCAAAGGATGGTTACTGCAATGAAGCTTAGTGGTTGTGGCAGGACAGCTC TGATTGAAAATAGGCCATTATTGATTGGTGAAGATTTGACGGAAGGAGAGGCGCGGGTTT TGGAAGAATATGGTTGGGTACCAAATTCTGGGCTTGGCACAATGCTCAATTACCGTGACC GGGTAGTTCATGACAGGTGGAACGAGAGATCTGGCACAGATTGGAAGACAAAGATAGGAA AGCTCCTGATGAATGGGTATTCCGAGGGGCATTTGGTCCTATCTCACTTTCCAACTAAAG TTGGGAAAATAGAAGATGACACCGAAATCAAACAGGAGGATCCTCTCTGAGTTATCCCCT GTCTTGTATATGCGCTTGGTAATCCTGCAAAGTTATAACCTTTAGCAGTAAAATGGCTAA TGCCACCCCCCTTCTTCATGTGGGCTTGTAGAGTTGTTGTAGTCATCATTATAATTCAGA AGGCTTACAAAGAATGAACACAGGGGTGCCATGTGTAGCCTATCTGCACCTGTACGTAGG AAATCATGGTGGGGTAACACTGTAATAAGTGTTGTGGATGGATAGACAGGTGAACTAGCA TTTTTTTTTGCTAGCTGTTGATAAACATTAGATCATCTGGCAAATGGTGGGTATTCATAT ATGGATTC