Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0219700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6286013:6288421:-1 gene:Os03g0219700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47B description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0219700-01)
Sequence	ATGAGGCTAACTGTTGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCA TGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGA TTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACT CTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGC ATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCT TCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACT CTGAAGATAGATGAATCTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCT TTGCTTATAGATCGGTTGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCT GCTATTCCTATCATTTCACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGG AAGACACTCGCTTACCTTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACA GAACAAGATGGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGA GAATTAGGAATGCAGATAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGG CTTGTCCAACAACTTGTTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAG AACAAGCCACTTATTGTTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGC AAGCTACACACCCATGGTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCT TTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACT TCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTT TCTGCAACAATACCGTTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTC CTTGTTAGAGCTATGAGTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTG TCCCAGACAGATGCCAACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAAC AGCTTACCACCATCTTTGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGAC ACTTTGAGGAGATGTATCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAAC ACCAAGCCATTGAAAGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAG CTACATGGAGATCTTGGAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGT GAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGT GATCTTGTGATTAATCTGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGC CGAACGGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACA TTTGTTGTAAGAAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACG GAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAA

Peptide Sequence

PEP ID	Os03t0219700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6286013:6288421:-1 gene:Os03g0219700 transcript:Os03t0219700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47B description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0219700-01)
Sequence	MRLTVGQVHRHVLALASSRSCFVLGDNLPLRMLSLPRAVRFHQTAWLGTETVQDKSASLT LASLEGQNKVEYGKKEKATRIGGPKPSSRASALKVKPKVSSFNSKPAKSTLPKSAVVKKT LKIDESLFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSG KTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKR LVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLS FNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPV LVRAMSVVPLDSITVPRPVLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVD TLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDG EFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETET FVVRKMRKQLAVPIKPCEFTEGKLLVHNEEDVE

Transcript Sequence

Transcript ID	Os03t0219700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6286013:6288421:-1 gene:Os03g0219700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47B description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0219700-01)
Sequence	GGCTTCAGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGG CCGCCTCGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGC ATCCTCGCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGA CATTTCGGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTG GCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTG ACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTT GGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAG GGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGC CGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAAC CAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAAT CTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGT TGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTT CACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACC TTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTG ATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGA TAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTG TTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTG TTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATG GTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAG ATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTC TTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGT TTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGA GTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCA ACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTT TGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTA TCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAG ATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTG GAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAG TTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATC TGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAG GGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAA TGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTG TTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTG AAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACC GATGTTTTTTTGCTCGATACAAATATTCAGATAAATGGGAATAGTTGTCTTTCCTGGG