Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0216800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6152114:6155182:1 gene:Os03g0216800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase B (Fragment). (Os03t0216800-01)
Sequence	ATGGGTCCCAGGAAGCTTCATCTGGCCTCCATTTCTGCCCTATCAATCTTTCTCTACGTG TTTGCTCACACCAATTCAGCACAAGCCTTCCCCGTCGCTGACGGCACGTACCCTCCTGAA GCTGAAGGCCCAGCAGCAGAAAGTTCAGACATGGACGAGCAGCTGGAGCTCACCCCTGGA CCGCAGCCGAGGGTCGTCGACGTCGACGACTACAGAGCGAGAGCCGACGCCGGCGACCAC ACGGAGGCGTTTCTTCAGGCCTGGAAGGAGGCCTGCAACTCCTCCGATTACCCATCCGTG CTCCTCGTGCCGGAGGGGAAGACATACCTCCTGATGCCTGTAAGCTTCAATGGCCCCTGC AGAGCCACCACGATCACTGCAACGATAAGGGGGACGCTGGAGGCTCCATCGAATCGATCG GTTTGGCTCGATCGCGATCTGCAGGAATGGATCACGTTCGACAACATCGATCACCTCCGT GTCCTCGGCGGCGGGACGCTCAATGGCAATGGACACCAATGGTGGATCAACTCTTGCAAG ACCAACAGATCCATGAGATGCGTCACCGGCCCAACGGCGCTGTACTTCAGGAGGTGCAAC CATCTGGTCGTGGAGGGCCTCCAGATCAGGGACAGCATGCAGATGCACGTCGTGATCGCC TACTCCTGGAGAGTGCTGGTCTCGAGGCTGCTCATCACGGCGCCAGGATGGAGCCCCAAC ACCGACGGCATCCACGTATCCAACAGCAGGGAAGTGTTGATGAGTGGCTGCATCATCAGC ACAGGTGATGACTGCATATCAATTGTGACCGGCTCTATGTTTATACGGGCAACTGGGATA TTTTGTGGACCAGGCCATGGCATAAGCATTGGTAGTCTAGGAGCAAACAAATCATGGGCC CATGTTTCCGACGTGCTGGTGGAGAAAGCTACACTGGTGGGCACTACCAACGGTGTGCGG ATCAAAACTTGGCAGGGAGGAGATGGCCATGCAGAAAGGATTACCTTTCAAGATATAACA ATGCACAACGTCACTAACCCGGTGATTATCGATCAGAATTACTGTGACTCCATGACACCA TGTCATGAACAGGGATCAGCTGTCGCCATAAATAACATACGCTACAGGAACATACGTGGA ACTAGTTCTTCAAAAGTCGCCATCAACTTCGTCTGCAGCAACTCTGTCCATTGTGATGGC ATAGTGATGCAGGATGTTTCTTTGGTTGGAGAAGGATCCTACGTTTCTTGTTCGTACATG AATGCTAGAGTGGTAGAGTTGGGGTATAACTTCCCGTATTGCAGAGCGGAAATGTAG

Peptide Sequence

PEP ID	Os03t0216800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6152114:6155182:1 gene:Os03g0216800 transcript:Os03t0216800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase B (Fragment). (Os03t0216800-01)
Sequence	MGPRKLHLASISALSIFLYVFAHTNSAQAFPVADGTYPPEAEGPAAESSDMDEQLELTPG PQPRVVDVDDYRARADAGDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPC RATTITATIRGTLEAPSNRSVWLDRDLQEWITFDNIDHLRVLGGGTLNGNGHQWWINSCK TNRSMRCVTGPTALYFRRCNHLVVEGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPN TDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWA HVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERITFQDITMHNVTNPVIIDQNYCDSMTP CHEQGSAVAINNIRYRNIRGTSSSKVAINFVCSNSVHCDGIVMQDVSLVGEGSYVSCSYM NARVVELGYNFPYCRAEM

Transcript Sequence

Transcript ID	Os03t0216800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6152114:6155182:1 gene:Os03g0216800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase B (Fragment). (Os03t0216800-01)
Sequence	ATCATCAGTAAATCACTGGGTTAATCTCTCCTCTCTTAAGTTCTAGCTACTGCTACAATA TGGGTCCCAGGAAGCTTCATCTGGCCTCCATTTCTGCCCTATCAATCTTTCTCTACGTGT TTGCTCACACCAATTCAGCACAAGCCTTCCCCGTCGCTGACGGCACGTACCCTCCTGAAG CTGAAGGCCCAGCAGCAGAAAGTTCAGACATGGACGAGCAGCTGGAGCTCACCCCTGGAC CGCAGCCGAGGGTCGTCGACGTCGACGACTACAGAGCGAGAGCCGACGCCGGCGACCACA CGGAGGCGTTTCTTCAGGCCTGGAAGGAGGCCTGCAACTCCTCCGATTACCCATCCGTGC TCCTCGTGCCGGAGGGGAAGACATACCTCCTGATGCCTGTAAGCTTCAATGGCCCCTGCA GAGCCACCACGATCACTGCAACGATAAGGGGGACGCTGGAGGCTCCATCGAATCGATCGG TTTGGCTCGATCGCGATCTGCAGGAATGGATCACGTTCGACAACATCGATCACCTCCGTG TCCTCGGCGGCGGGACGCTCAATGGCAATGGACACCAATGGTGGATCAACTCTTGCAAGA CCAACAGATCCATGAGATGCGTCACCGGCCCAACGGCGCTGTACTTCAGGAGGTGCAACC ATCTGGTCGTGGAGGGCCTCCAGATCAGGGACAGCATGCAGATGCACGTCGTGATCGCCT ACTCCTGGAGAGTGCTGGTCTCGAGGCTGCTCATCACGGCGCCAGGATGGAGCCCCAACA CCGACGGCATCCACGTATCCAACAGCAGGGAAGTGTTGATGAGTGGCTGCATCATCAGCA CAGGTGATGACTGCATATCAATTGTGACCGGCTCTATGTTTATACGGGCAACTGGGATAT TTTGTGGACCAGGCCATGGCATAAGCATTGGTAGTCTAGGAGCAAACAAATCATGGGCCC ATGTTTCCGACGTGCTGGTGGAGAAAGCTACACTGGTGGGCACTACCAACGGTGTGCGGA TCAAAACTTGGCAGGGAGGAGATGGCCATGCAGAAAGGATTACCTTTCAAGATATAACAA TGCACAACGTCACTAACCCGGTGATTATCGATCAGAATTACTGTGACTCCATGACACCAT GTCATGAACAGGGATCAGCTGTCGCCATAAATAACATACGCTACAGGAACATACGTGGAA CTAGTTCTTCAAAAGTCGCCATCAACTTCGTCTGCAGCAACTCTGTCCATTGTGATGGCA TAGTGATGCAGGATGTTTCTTTGGTTGGAGAAGGATCCTACGTTTCTTGTTCGTACATGA ATGCTAGAGTGGTAGAGTTGGGGTATAACTTCCCGTATTGCAGAGCGGAAATGTAGTGTA TCTGTAGTACTGCAGAGCGGAAATATTATTCATTCTTTCGATAAATAATACTCCCTCCAT TCTAAAATAT