Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0216400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6118856:6120196:-1 gene:Os03g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0216400-01)
Sequence	ATGATCCGTTCCTCGGGAGACGTGGTGCAGTGGACGAAGCGCATCTCGGCGCTGGCGAGG AGCGGGCGCGCGGCGGAGGCGGTGGCGGCGTTCGCCAGGATGGACGCGGCGCCGAACGCG CTCACGCTCGCGAGCGTCCTCCCGGCGTGCGCAAGGCTGGGGGACCTCGCCCTGGGCCGG GCGATCCACGGGCTCTGGCTCAGGCGCGGGGGCGGCCACGGCGCCAACCCGATCGTGGAC AACGCCGTGCTGGACGTGTACGCCAAGTGCGGCGCCCTCGCCAGTGCGCGCAGGCTGTTC GACGAAATGCCGGAGAGGGACGTGTTCGCCTGGACCACGATGGTGTGGGGCCTCGCGAGG AACGGCAGCCCTCAGGACGCCGTCGCGATGTTCCGGGGGATGCTCTCCGACGGCGACGCC GCGCCGAACGACGCCACCGTGGTCAGCGCTCTGCACGCCGTGGCCACCTCCGGCTCTCTG GTCAGCTGCAAGCTGTTGCACTCGTACGCCGTGAAGCAAGGTCTCGGAGGCGAGCTGGTC GTAGGCAACGCGCTGATCGACGCCTACGCCAAGTGCGGGGACGCCTGGCTGGCGTTCAAG GTGTTCGTCGAGCTCCCGGAGACGGACATGGTTTCCTGGGGCACCATCACGCGGGCCATG GCCGTGCACGGCCGGTGCAGGGAGGCGCTGCAGCTCTTCTCCCTGATGCTCCGGCGCGGG GTCCGGCCGGACGGCGCCGTGTTCTTGGCGCTGCTCACCGCCTGCTGCCACGCCGGGCGG GTGGACCAGGCGCTGCTGTTCTTGGGCGCCATGGCGAGGGTGTACGGGATCTCGCCGCGG CGAGAGCACTACACGTGCGTGCTCGACGCCTGCGGCCGAGCCGGGCAGCTTGACAGAGCT GGAGAGATCTTCAGGCAGATGCCAGCGGAATACGACGCCGAGAAGGCGCTGGGAGTTTAC TGCTCCTATGCCGTATCGAACGGCGTTGCCGGTGTCGCCGGCGAGCGGCTGCCGGAGTTG TTCCTCGACGGAGAAGTGGACGCCGGAGGAGGCACATACGCTGTCGTGTCCAAGTCGCTC GCCGATGCAGGGAGGTGGGAGGATGCGTGTGCTGTCCGGGAGAGGATGGCCGAAAGAAGG ATTGAAAAGGAAGCCGCTTGTACCTGGATTGAAGTATAG

Peptide Sequence

PEP ID	Os03t0216400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6118856:6120196:-1 gene:Os03g0216400 transcript:Os03t0216400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0216400-01)
Sequence	MIRSSGDVVQWTKRISALARSGRAAEAVAAFARMDAAPNALTLASVLPACARLGDLALGR AIHGLWLRRGGGHGANPIVDNAVLDVYAKCGALASARRLFDEMPERDVFAWTTMVWGLAR NGSPQDAVAMFRGMLSDGDAAPNDATVVSALHAVATSGSLVSCKLLHSYAVKQGLGGELV VGNALIDAYAKCGDAWLAFKVFVELPETDMVSWGTITRAMAVHGRCREALQLFSLMLRRG VRPDGAVFLALLTACCHAGRVDQALLFLGAMARVYGISPRREHYTCVLDACGRAGQLDRA GEIFRQMPAEYDAEKALGVYCSYAVSNGVAGVAGERLPELFLDGEVDAGGGTYAVVSKSL ADAGRWEDACAVRERMAERRIEKEAACTWIEV

Transcript Sequence

Transcript ID	Os03t0216400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6118856:6120196:-1 gene:Os03g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0216400-01)
Sequence	GGTGCGAAACTGTTAGTCTGTCATGAATGATCCGTTCCTCGGGAGACGTGGTGCAGTGGA CGAAGCGCATCTCGGCGCTGGCGAGGAGCGGGCGCGCGGCGGAGGCGGTGGCGGCGTTCG CCAGGATGGACGCGGCGCCGAACGCGCTCACGCTCGCGAGCGTCCTCCCGGCGTGCGCAA GGCTGGGGGACCTCGCCCTGGGCCGGGCGATCCACGGGCTCTGGCTCAGGCGCGGGGGCG GCCACGGCGCCAACCCGATCGTGGACAACGCCGTGCTGGACGTGTACGCCAAGTGCGGCG CCCTCGCCAGTGCGCGCAGGCTGTTCGACGAAATGCCGGAGAGGGACGTGTTCGCCTGGA CCACGATGGTGTGGGGCCTCGCGAGGAACGGCAGCCCTCAGGACGCCGTCGCGATGTTCC GGGGGATGCTCTCCGACGGCGACGCCGCGCCGAACGACGCCACCGTGGTCAGCGCTCTGC ACGCCGTGGCCACCTCCGGCTCTCTGGTCAGCTGCAAGCTGTTGCACTCGTACGCCGTGA AGCAAGGTCTCGGAGGCGAGCTGGTCGTAGGCAACGCGCTGATCGACGCCTACGCCAAGT GCGGGGACGCCTGGCTGGCGTTCAAGGTGTTCGTCGAGCTCCCGGAGACGGACATGGTTT CCTGGGGCACCATCACGCGGGCCATGGCCGTGCACGGCCGGTGCAGGGAGGCGCTGCAGC TCTTCTCCCTGATGCTCCGGCGCGGGGTCCGGCCGGACGGCGCCGTGTTCTTGGCGCTGC TCACCGCCTGCTGCCACGCCGGGCGGGTGGACCAGGCGCTGCTGTTCTTGGGCGCCATGG CGAGGGTGTACGGGATCTCGCCGCGGCGAGAGCACTACACGTGCGTGCTCGACGCCTGCG GCCGAGCCGGGCAGCTTGACAGAGCTGGAGAGATCTTCAGGCAGATGCCAGCGGAATACG ACGCCGAGAAGGCGCTGGGAGTTTACTGCTCCTATGCCGTATCGAACGGCGTTGCCGGTG TCGCCGGCGAGCGGCTGCCGGAGTTGTTCCTCGACGGAGAAGTGGACGCCGGAGGAGGCA CATACGCTGTCGTGTCCAAGTCGCTCGCCGATGCAGGGAGGTGGGAGGATGCGTGTGCTG TCCGGGAGAGGATGGCCGAAAGAAGGATTGAAAAGGAAGCCGCTTGTACCTGGATTGAAG TATAGCAACACCCTGCATCACCACCAAACATTCAGATCCTTGTTAACTTATAATATGAGT CGTTGATATAGCTAGACCGAAATTACACTCGTGTAAAAGAAAAACATTTGCAGGTAAACA ATTCAAGAGGAGATTTTAGTT