Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0216000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:6098433:6100341:-1 gene:Os03g0216000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc-finger protein KNUCKLES. (Os03t0216000-01)
Sequence	ATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAGCCGCCGCAT GACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCTCCGGCGCCC AGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCGCACGCGTCG TCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCCGCCGCCGCG GCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGCAGCCGCAAG TTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAG AACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCC GCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAGCTGCTCGGC TACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAA CACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAG TTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTGCCGGCGGGG CTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCGGCCGGTC GCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTTCTCTTGTG GCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCGCTTGTGAG CAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTATAA

Peptide Sequence

PEP ID	Os03t0216000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:6098433:6100341:-1 gene:Os03g0216000 transcript:Os03t0216000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc-finger protein KNUCKLES. (Os03t0216000-01)
Sequence	MGSGGEGGGGAASVRDQPPHDFANVASFSELPFLRPAPAPRESPNNSAIRLFGIDVPHAS SSPDGKASKESVVVSTAAAAASTHGAAAAAIAAAADSSRKFECHYCCRHFPTSQALGGHQ NAHKRERQHAKRVQMQTAMAAAAAAASGAHHHHHHHQLLGYPQHHHRFGLAGPTVAALYQ HPSWPTMSGGGGGISSIGPQFYSGIGSVTQPINGSPLPAGLWRPGPMAAPPLLAGERRPV AVSTSSVFRGDEPRASASLVASQTASSSLLLSPQGQFACEQPPATTAAEGVSLDLHL

Transcript Sequence

Transcript ID	Os03t0216000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:6098433:6100341:-1 gene:Os03g0216000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc-finger protein KNUCKLES. (Os03t0216000-01)
Sequence	CTGCCAGTGCTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCC TCCTTCCATTCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTA TATTGCCTAGCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCT GTGTACCTGGCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTA CGGGATCAGCCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTG CGGCCGGCTCCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATC GACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTC TCCACCGCCGCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCC GCCGACAGCAGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAG GCGCTCGGGGGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAG ATGCAGACCGCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCAC CACCACCAGCTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACG GTGGCGGCATTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATC TCCTCAATTGGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGG AGCCCGCTGCCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCC GGAGAGCGGCGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGA GCTTCAGCTTCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAA GGTCAGTTCGCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGAT TTGCACCTATAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAA CTGATTTCTCGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCA GATGAATCGTGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAA CTTTGATCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTT AGGGTTTGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTT ACTAAGTAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCA TATTAATTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAA TTTCGGATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTT TCACGGAATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAA AAAAAAAATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGG GCCGGCCTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTGTAAAATTCT TTCTGAAGCGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGG GCAACAGTTCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGC TTTCGCATGTCGCTAGGGTCAGGTATATGCACAACTGCAGATGCATGAT