Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0213200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5900087:5902461:1 gene:Os03g0213200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0213200-01)
Sequence

ATGGAGGCGGCCACCCCGACCCGCCCTCCCCACGCCGCCCCGTCCTCCTCCCCGTCCCCG
TCGCCGGCGTCGCTGCGCCAGTGGCGGCCGGCGGCGCAGCGCAACCTGCGGAACCAGTGG
TCGCGCCTGCTCGCCGCCAAGGCCCGGTGGCTGTCCGCCGCCGCCGACGGCCGCTCCCAC
GCCTCCGCCCTCGTCAACGCCCACCTCTCCCGCAGGTACATGCCGGGCATGGATTTGGGG
GTGCTCAAGGACATGCCCGGGATCCGCGAGAAGGCGAGCGGTAAGCTTGCGCGCAGGGAG
GAGCAATGCCAGAGCATGCTTCTATCGGCCTATAGGGAGATGGTCCTTGCTACGGCCGAG
TTGGTTAGAGCTTCTCACTCTATGCGTTGTTTTTCCAAAGTAGCCGCGAATAGTCCGTTG
ATACGGTTTACTGAGCGCCAAGATGATATGAATGATTCGGGGGACGGAGGAGGATCCCCT
GTATTCAAATGGTTCTCCGTATTAGAATTCGAGAATCTTGCTCAAGAACTTGTCGATATG
TTCATTTCAGAACTGCAATTGAAGAGATTGCTTGTCTTGGAACTCCTCTCGGTAACCTTC
AAGGAAGGTGTACAACATGACGCATCATTAGAATGGTCCAATGAGCTATTTGATGGGGAG
TTCAATGAGTTTCAGAGTATTGGCCTTCTGTCAGGAGATAGCTACGCACTGCCCAAAAAT
TGGAGTGCTGGTGTCTCAAAGGCATGGCAACCTGATCAAACCCCATCCCATGAGGTTTTA
CAGGTTTATTTGACTTCTTGGCTTGCTAATGTGAACATCAAGACAAGCAGAATTGATGAA
ATATTTGAGCTTGTCGGGGAGGAGATGCAGATAAAATTGTCTTGA

Peptide Sequence

PEP ID

Os03t0213200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5900087:5902461:1 gene:Os03g0213200 transcript:Os03t0213200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0213200-01)
Sequence

MEAATPTRPPHAAPSSSPSPSPASLRQWRPAAQRNLRNQWSRLLAAKARWLSAAADGRSH
ASALVNAHLSRRYMPGMDLGVLKDMPGIREKASGKLARREEQCQSMLLSAYREMVLATAE
LVRASHSMRCFSKVAANSPLIRFTERQDDMNDSGDGGGSPVFKWFSVLEFENLAQELVDM
FISELQLKRLLVLELLSVTFKEGVQHDASLEWSNELFDGEFNEFQSIGLLSGDSYALPKN
WSAGVSKAWQPDQTPSHEVLQVYLTSWLANVNIKTSRIDEIFELVGEEMQIKLS

Transcript Sequence

Transcript ID

Os03t0213200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5900087:5902461:1 gene:Os03g0213200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0213200-01)
Sequence

AGGCGAGACGATGGAGGCGGCCACCCCGACCCGCCCTCCCCACGCCGCCCCGTCCTCCTC
CCCGTCCCCGTCGCCGGCGTCGCTGCGCCAGTGGCGGCCGGCGGCGCAGCGCAACCTGCG
GAACCAGTGGTCGCGCCTGCTCGCCGCCAAGGCCCGGTGGCTGTCCGCCGCCGCCGACGG
CCGCTCCCACGCCTCCGCCCTCGTCAACGCCCACCTCTCCCGCAGGTACATGCCGGGCAT
GGATTTGGGGGTGCTCAAGGACATGCCCGGGATCCGCGAGAAGGCGAGCGGTAAGCTTGC
GCGCAGGGAGGAGCAATGCCAGAGCATGCTTCTATCGGCCTATAGGGAGATGGTCCTTGC
TACGGCCGAGTTGGTTAGAGCTTCTCACTCTATGCGTTGTTTTTCCAAAGTAGCCGCGAA
TAGTCCGTTGATACGGTTTACTGAGCGCCAAGATGATATGAATGATTCGGGGGACGGAGG
AGGATCCCCTGTATTCAAATGGTTCTCCGTATTAGAATTCGAGAATCTTGCTCAAGAACT
TGTCGATATGTTCATTTCAGAACTGCAATTGAAGAGATTGCTTGTCTTGGAACTCCTCTC
GGTAACCTTCAAGGAAGGTGTACAACATGACGCATCATTAGAATGGTCCAATGAGCTATT
TGATGGGGAGTTCAATGAGTTTCAGAGTATTGGCCTTCTGTCAGGAGATAGCTACGCACT
GCCCAAAAATTGGAGTGCTGGTGTCTCAAAGGCATGGCAACCTGATCAAACCCCATCCCA
TGAGGTTTTACAGGTTTATTTGACTTCTTGGCTTGCTAATGTGAACATCAAGACAAGCAG
AATTGATGAAATATTTGAGCTTGTCGGGGAGGAGATGCAGATAAAATTGTCTTGAGGATT
CTGATGCGTATGACTTATAAGTAAGAAAAGTTGATCTATCCTCCTGTTTGTGGTTTCGTT
TCCTTAGAAGTCCTAAATGCTAAAACCTTATGTAATCTGCTCGAACCCCAAGGGAGAAAA
CCATTCTCTCATAATTTAGATTTTACAAACAGAAAGTTTAACAC