Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0212800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5876410:5883222:-1 gene:Os03g0212800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 6 description:Similar to Beta-glucosidase. (Os03t0212800-01)
Sequence

ATGGGGAGGATAAAGAGTAGTAGTGGGCGATGCAGCACGGCGAGGCTGGAGGCGGTCGCC
GTCCTCGTCGTCGTCTTCGGCGTCGCGTCGTCGTCGCTGCGAGGATGCATTGCGCAGCAG
AGCGGAGGAGGGCTAACCAGGGGCAGCTTCCCCGAGGGGTTCGTCTTCGGCACCGCCTCC
GCCGCGTACCAGTACGAGGGAGCTGTGAAGGAGGACGGGAGAGGGCAGACCATCTGGGAC
ACGTTCGCGCACACCTTTGGAAAGATCACCGACTTCAGCAATGCTGATGTTGCAGTTGAT
CAGTACCACCGTTTCGAGGAGGATATACAGCTCATGGCAGACATGGGGATGGATGCGTAT
CGGTTCTCGATAGCATGGTCAAGAATCTACCCAAATGGTGTTGGTCAAGTCAATCAAGCT
GGTATCGACCACTACAACAAGCTGATCGATGCACTTCTAGCAAAAGGAATTCAGCCATAT
GTGACACTCTACCACTGGGACCTCCCCCAGGCCCTTGAAGACAAGTACAAGGGCTGGCTT
GACAGGCAGATAGTGGACGATTTCGCGGCGTACGCGGAGACGTGCTTCAGGGAGTTCGGG
GACAGGGTGAAGCACTGGATCACGCTCAACGAGCCGCACACGGTGGCCATCCAGGGCTAC
GACGCAGGGCTCCAGGCCCCCGGCCGCTGCTCCGTGCTGCTCCACCTCTACTGCAAGGCC
GGCAACTCCGGCACCGAGCCCTACGTCGTCGCCCACCACTTCATCCTCGCCCACGCCGCC
GCCGCCAGCATCTACAGGACAAAATACAAGGCGACGCAGAACGGGCAGCTTGGGATAGCG
TTCGACGTGATGTGGTTCGAGCCGATGTCCAACACCACGATCGACATCGAGGCGGCCAAG
AGAGCGCAGGAGTTTCAGCTAGGATGGTTTGCTGATCCGTTCTTCTTCGGCGACTACCCG
GCGACGATGAGGGCGAGGGTGGGGGAGAGGCTGCCGAGGTTCACGGCGGATGAGGCCGCC
GTCGTCAAGGGGGCGCTGGATTTCGTCGGCATAAACCACTACACCACCTACTACACGAGG
CACAACAACACCAACATCATCGGGACATTGCTCAACAACACCTTGGCAGACACCGGCACC
GTCAGCCTCCCATTCAAGAATGGGAAGCCAATTGGAGATAGGGCAAATTCGATATGGCTG
TACATTGTGCCCCGAGGGATGAGGAGCCTGATGAACTATGTCAAGGAAAGGTACAACAGC
CCACCAGTGTACATCACTGAAAACGGGATGGATGACAGCAACAACCCGTTCATTTCCATC
AAGGACGCCCTCAAGGACAGCAAGAGGATCAAATACCACAATGACTACCTCACCAATCTG
GCTGCTTCCATCAAGGAGGACGGGTGCGACGTACGTGGGTACTTCGCGTGGTCTCTGCTG
GACAACTGGGAGTGGGCGGCCGGATACTCCTCGAGATTCGGGCTCTACTTCGTGGACTAC
AAGGATAACCTCAAGAGATACCCCAAGAACTCGGTGCAGTGGTTCAAGGCCCTCCTGAAG
ACCTGA

Peptide Sequence

PEP ID

Os03t0212800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5876410:5883222:-1 gene:Os03g0212800 transcript:Os03t0212800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 6 description:Similar to Beta-glucosidase. (Os03t0212800-01)
Sequence

MGRIKSSSGRCSTARLEAVAVLVVVFGVASSSLRGCIAQQSGGGLTRGSFPEGFVFGTAS
AAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRFEEDIQLMADMGMDAY
RFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWL
DRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKA
GNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAK
RAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGALDFVGINHYTTYYTR
HNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNS
PPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLL
DNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT

Transcript Sequence

Transcript ID

Os03t0212800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5876410:5883222:-1 gene:Os03g0212800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 6 description:Similar to Beta-glucosidase. (Os03t0212800-01)
Sequence

ATCAGTCCGTGCAGTTTGGAGCCCACACACCACGATCTCCCGTACCTTCTCTCTGCGAGA
TGGGGAGGATAAAGAGTAGTAGTGGGCGATGCAGCACGGCGAGGCTGGAGGCGGTCGCCG
TCCTCGTCGTCGTCTTCGGCGTCGCGTCGTCGTCGCTGCGAGGATGCATTGCGCAGCAGA
GCGGAGGAGGGCTAACCAGGGGCAGCTTCCCCGAGGGGTTCGTCTTCGGCACCGCCTCCG
CCGCGTACCAGTACGAGGGAGCTGTGAAGGAGGACGGGAGAGGGCAGACCATCTGGGACA
CGTTCGCGCACACCTTTGGAAAGATCACCGACTTCAGCAATGCTGATGTTGCAGTTGATC
AGTACCACCGTTTCGAGGAGGATATACAGCTCATGGCAGACATGGGGATGGATGCGTATC
GGTTCTCGATAGCATGGTCAAGAATCTACCCAAATGGTGTTGGTCAAGTCAATCAAGCTG
GTATCGACCACTACAACAAGCTGATCGATGCACTTCTAGCAAAAGGAATTCAGCCATATG
TGACACTCTACCACTGGGACCTCCCCCAGGCCCTTGAAGACAAGTACAAGGGCTGGCTTG
ACAGGCAGATAGTGGACGATTTCGCGGCGTACGCGGAGACGTGCTTCAGGGAGTTCGGGG
ACAGGGTGAAGCACTGGATCACGCTCAACGAGCCGCACACGGTGGCCATCCAGGGCTACG
ACGCAGGGCTCCAGGCCCCCGGCCGCTGCTCCGTGCTGCTCCACCTCTACTGCAAGGCCG
GCAACTCCGGCACCGAGCCCTACGTCGTCGCCCACCACTTCATCCTCGCCCACGCCGCCG
CCGCCAGCATCTACAGGACAAAATACAAGGCGACGCAGAACGGGCAGCTTGGGATAGCGT
TCGACGTGATGTGGTTCGAGCCGATGTCCAACACCACGATCGACATCGAGGCGGCCAAGA
GAGCGCAGGAGTTTCAGCTAGGATGGTTTGCTGATCCGTTCTTCTTCGGCGACTACCCGG
CGACGATGAGGGCGAGGGTGGGGGAGAGGCTGCCGAGGTTCACGGCGGATGAGGCCGCCG
TCGTCAAGGGGGCGCTGGATTTCGTCGGCATAAACCACTACACCACCTACTACACGAGGC
ACAACAACACCAACATCATCGGGACATTGCTCAACAACACCTTGGCAGACACCGGCACCG
TCAGCCTCCCATTCAAGAATGGGAAGCCAATTGGAGATAGGGCAAATTCGATATGGCTGT
ACATTGTGCCCCGAGGGATGAGGAGCCTGATGAACTATGTCAAGGAAAGGTACAACAGCC
CACCAGTGTACATCACTGAAAACGGGATGGATGACAGCAACAACCCGTTCATTTCCATCA
AGGACGCCCTCAAGGACAGCAAGAGGATCAAATACCACAATGACTACCTCACCAATCTGG
CTGCTTCCATCAAGGAGGACGGGTGCGACGTACGTGGGTACTTCGCGTGGTCTCTGCTGG
ACAACTGGGAGTGGGCGGCCGGATACTCCTCGAGATTCGGGCTCTACTTCGTGGACTACA
AGGATAACCTCAAGAGATACCCCAAGAACTCGGTGCAGTGGTTCAAGGCCCTCCTGAAGA
CCTGAACTCCAGCTGAGAAGTAGTGCTACAATAGTTTGGGCGCCATTTCCATACATCCGA
TAGATTTATTGGTCTGCACATATACGAATATACGATACCCTGCATATCTCGGAAATGTTT
TGTGGTTTTTGTTTTGTTTGTGATACGATAGAATGTATCACTGAATCGTCTGGTCTGTTA
GCACACGAGTGAAAAGGGGTAGTACTGC