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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0212700-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:5870912:5874813:1 gene:Os03g0212700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome C reductase-processing peptidase subunit I, MPP subunit I, P55. (Os03t0212700-01);Similar to mitochondrial-processing peptidase beta subunit. (Os03t0212700-02)
Sequence

CTTGCGGACATTCTGCAGCACTCAAAGTTGGAAGAGTCCCGCATTGAACGTGAGCGCGAT
GTTATTCTGCGAGAGATGGAAGAGGTTGAGGGACAATATGAGGAAGTTATATTCGATCAT
CTCCATGCAACTGCATTCCAGTACACTTCTCTTGGCAGACCAATCTTGGGTTCTGCAGAA
AATGTCAAGTCAATTACCCAAGAGGACCTCCAGAAGTATATTGAAACACATTATACGGCT
CCTAGAATGGTTATCACTGCTGCTGGTGCTGTTAAGCATGATGATATTGTAGAGATGGCA
ACAAAACTGTTTAATGACCTACCAACTGACCCTACAACAACAAGCATGTTGGTTTCTACC
CAACCAGCCTGCTTTACTGGTTCTGAGGTCCGCATCATTGATGATGACATGCCCCTTGCT
CAATTTGCTGTTGCCTTTAATGGAGCATCATGGATAGATCCTGATTCTATTGCCTTGATG
GTCATGCAATCCATGCTTGGCTCATGGAACAAGAGTGCTGGAGGAGGGAAACACATGGGT
TCAGAGCTTGTACAAAGGGTAGCGATCAATGACATTGCTGAGAGTATAATGGCATTTAAT
ACAAATTACAAGGACACTGGCCTCTTTGGTGTCTACGCTGTTGCTAAGCCTGACTGCTTG
GATGATTTGGCTTTTGCAATCATGCAAGAGATTAGCAAACTGTCATACCGGGTTACTGAG
GAAGATGTTATCCGTGCACGTAATCAGCTGAAATCTTCCATCCAACTGCACCTCGATGGT
TCCACTGCTGTTGTTGAGGATATTGGCCGTCAGTTACTCATCTATGGTCGAAGAATTCCT
ATTCCTGAGCTTTTTGCAAGAATAGATGCAGTTGACGCAAGCACAGTCAAGCGAGTGGCC
AACCGTTTCATTTTTGACCAGGATATCGCTATTGCTGCAATGGGACCCATTCAGGGTCTT
CCGGACTACAACTGGTTCAGGCGCCGGACCTACATGCTCCGTTACTAG

Peptide Sequence

PEP ID

Os03t0212700-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:5870912:5874813:1 gene:Os03g0212700 transcript:Os03t0212700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome C reductase-processing peptidase subunit I, MPP subunit I, P55. (Os03t0212700-01);Similar to mitochondrial-processing peptidase beta subunit. (Os03t0212700-02)
Sequence

LADILQHSKLEESRIERERDVILREMEEVEGQYEEVIFDHLHATAFQYTSLGRPILGSAE
NVKSITQEDLQKYIETHYTAPRMVITAAGAVKHDDIVEMATKLFNDLPTDPTTTSMLVST
QPACFTGSEVRIIDDDMPLAQFAVAFNGASWIDPDSIALMVMQSMLGSWNKSAGGGKHMG
SELVQRVAINDIAESIMAFNTNYKDTGLFGVYAVAKPDCLDDLAFAIMQEISKLSYRVTE
EDVIRARNQLKSSIQLHLDGSTAVVEDIGRQLLIYGRRIPIPELFARIDAVDASTVKRVA
NRFIFDQDIAIAAMGPIQGLPDYNWFRRRTYMLRY

Transcript Sequence

Transcript ID

Os03t0212700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5870912:5874813:1 gene:Os03g0212700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome C reductase-processing peptidase subunit I, MPP subunit I, P55. (Os03t0212700-01);Similar to mitochondrial-processing peptidase beta subunit. (Os03t0212700-02)
Sequence

TCTTGCGGACATTCTGCAGCACTCAAAGTTGGAAGAGTCCCGCATTGAACGTGAGCGCGA
TGTTATTCTGCGAGAGATGGAAGAGGTTGAGGGACAATATGAGGAAGTTATATTCGATCA
TCTCCATGCAACTGCATTCCAGTACACTTCTCTTGGCAGACCAATCTTGGGTTCTGCAGA
AAATGTCAAGTCAATTACCCAAGAGGACCTCCAGAAGTATATTGAAACACATTATACGGC
TCCTAGAATGGTTATCACTGCTGCTGGTGCTGTTAAGCATGATGATATTGTAGAGATGGC
AACAAAACTGTTTAATGACCTACCAACTGACCCTACAACAACAAGCATGTTGGTTTCTAC
CCAACCAGCCTGCTTTACTGGTTCTGAGGTCCGCATCATTGATGATGACATGCCCCTTGC
TCAATTTGCTGTTGCCTTTAATGGAGCATCATGGATAGATCCTGATTCTATTGCCTTGAT
GGTCATGCAATCCATGCTTGGCTCATGGAACAAGAGTGCTGGAGGAGGGAAACACATGGG
TTCAGAGCTTGTACAAAGGGTAGCGATCAATGACATTGCTGAGAGTATAATGGCATTTAA
TACAAATTACAAGGACACTGGCCTCTTTGGTGTCTACGCTGTTGCTAAGCCTGACTGCTT
GGATGATTTGGCTTTTGCAATCATGCAAGAGATTAGCAAACTGTCATACCGGGTTACTGA
GGAAGATGTTATCCGTGCACGTAATCAGCTGAAATCTTCCATCCAACTGCACCTCGATGG
TTCCACTGCTGTTGTTGAGGATATTGGCCGTCAGTTACTCATCTATGGTCGAAGAATTCC
TATTCCTGAGCTTTTTGCAAGAATAGATGCAGTTGACGCAAGCACAGTCAAGCGAGTGGC
CAACCGTTTCATTTTTGACCAGGATATCGCTATTGCTGCAATGGGACCCATTCAGGGTCT
TCCGGACTACAACTGGTTCAGGCGCCGGACCTACATGCTCCGTTACTAGACTCTCCAACC
GATGTACTATGTTTACATTCTGCAAAGGCAAGATAATTGCCTCTTTTGGCATCAGTATAT
TATGGCCTCGTCCATGCACATTGTGTGTGCGACGTGGAGGAAATTTTTTTGAGCACCATT
TTCCTTGTTTTCTTTGTCCAAAACCAACAAAGCTGTCAATAATGATAGGCAAATTCAACT
GACGTGGCTTACTTGAGTTGCCACCCGTTGTTTCTACGATGAATCGTTACCCCTACTTAT
CCTTTTTTTTATTGCAAGATTGCTTTCTTTTTCTTGGAATAATTTGATGAAGCTGCTTAT
GTAAAGATGATAGTTTTGCTGTGTCGACTATTGACAACTGCACGAGGTGCGAATTGTACC
GATCTGTTAATCTCTTATTGCCTCTTGGAG