Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0212300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5858227:5859977:1 gene:Os03g0212300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0212300-01)
Sequence

ATGGAGGACCAGATGGCTAACCTTCGCTTGACTGACTTCGAGTTCTTCAGGATCATCCTG
CCCGGATCCTCCAAAACGAAACTGAAGCTGCCTTACAAGTTCGCGAGGGAGCTTGGGGAC
CGAGAGCTCCGGGAGGCGAGGCTGCGGGTCGCCGGCGAGGGGCGGCGCCCGTGGGACGTG
AAGGTGTTCGACGACGACGTCAGCGGCGACGTGTACCTGGGCCGCGGCTGGCAGGAGTTC
GCCCGCGCCCACGACCTGCGTGACGGCCACTTCCTCGTCTTCCGCTACGACGGCGCCGCC
GCGTTCACCGTCACCGTCTTCGACGAGACCATGTGCCGCCGCGACTACCGCCGCCACCAC
GACGCCGCCGAGAGCGGAAGCAGCAGCAGCAGCGACAGCAGTGATGCGGCGGCGGCGGTG
GCGACGGCGGCGGCGGAGGGGGTCGGCGACGTGGCGCTGTCGCAGTTCGCCGTGACGCTG
CGGCAGTGCAACCTCGAAGACAAGCAGGCGCAGTACTTGAACGTGCCGATGGAGTTCCAG
GAGGCGCACGAGTACGCGAGGCGGGAGAAGGTGGTGCTGCGGATGCGCGGGGAGGCATGG
ACGGTGAGGCTGAAGCACAGCAGGCGGGAGCGCGGCCAGCGCACGGCGTTCCGGTACGGG
TGGCACCGGTTCTGCGTCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGTC
CTCCGCGAGGGCGACCTCCGCCGCGGCGGTGCCGCCGACGACCACGTGCTCAAGGTCGCC
GTGCGCAAGGCCGACGGCACCACCCTCGAGTGA

Peptide Sequence

PEP ID

Os03t0212300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5858227:5859977:1 gene:Os03g0212300 transcript:Os03t0212300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0212300-01)
Sequence

MEDQMANLRLTDFEFFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDV
KVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDYRRHH
DAAESGSSSSSDSSDAAAAVATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQ
EAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRV
LREGDLRRGGAADDHVLKVAVRKADGTTLE

Transcript Sequence

Transcript ID

Os03t0212300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5858227:5859977:1 gene:Os03g0212300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0212300-01)
Sequence

CTCTTCAATGTAGCTCCCCTCTCTTCACCCACAAGTCCAGCTAGCCTAGCAAAGTTCACA
TTTTTCTTCTATCTTGCATCATCACACGAAGTGAACTGCGTGATCGTCGGAGACATCGAA
TCAAAGCTCTCGCCCATTCTGCTTGCTGCCCTGATCTCCTTCAAATTCTAGCCCAAAGAA
TGGAGGACCAGATGGCTAACCTTCGCTTGACTGACTTCGAGTTCTTCAGGATCATCCTGC
CCGGATCCTCCAAAACGAAACTGAAGCTGCCTTACAAGTTCGCGAGGGAGCTTGGGGACC
GAGAGCTCCGGGAGGCGAGGCTGCGGGTCGCCGGCGAGGGGCGGCGCCCGTGGGACGTGA
AGGTGTTCGACGACGACGTCAGCGGCGACGTGTACCTGGGCCGCGGCTGGCAGGAGTTCG
CCCGCGCCCACGACCTGCGTGACGGCCACTTCCTCGTCTTCCGCTACGACGGCGCCGCCG
CGTTCACCGTCACCGTCTTCGACGAGACCATGTGCCGCCGCGACTACCGCCGCCACCACG
ACGCCGCCGAGAGCGGAAGCAGCAGCAGCAGCGACAGCAGTGATGCGGCGGCGGCGGTGG
CGACGGCGGCGGCGGAGGGGGTCGGCGACGTGGCGCTGTCGCAGTTCGCCGTGACGCTGC
GGCAGTGCAACCTCGAAGACAAGCAGGCGCAGTACTTGAACGTGCCGATGGAGTTCCAGG
AGGCGCACGAGTACGCGAGGCGGGAGAAGGTGGTGCTGCGGATGCGCGGGGAGGCATGGA
CGGTGAGGCTGAAGCACAGCAGGCGGGAGCGCGGCCAGCGCACGGCGTTCCGGTACGGGT
GGCACCGGTTCTGCGTCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGTCC
TCCGCGAGGGCGACCTCCGCCGCGGCGGTGCCGCCGACGACCACGTGCTCAAGGTCGCCG
TGCGCAAGGCCGACGGCACCACCCTCGAGTGATCGATCTTACTAATTAACTACTGAGATT
AATAAATTAATTAGCGCGCTCTCGTAGTCTCGTCTCGTCGTGTGTGTGTGTGTTTAGGTG
TTGGTTAGTCGTTCTAAATGGCCCGTATTTGTCTTACGTTAAATCGTCTGGTACTTGATC
GGATGGTGTTTGTGGGTGTGCCACTGGCAGATCGACAGGTGGCCGAGCTGTGTACCGAAC
TGCTTTATTACTCTCTTTCACGAACAAGGCCCTGTGTTTCGCATTCACAACAATGGGAAA
CAACCCAATCTCGTCATAAGACTGGATGGATTCGTATCGCAAGTGCTCCCTCAGTGTTAA
TGTAAACCAACTTAATATAAAACGTGATATTTTATATTTAAATTTATTGTATT