Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0211600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5817877:5819374:1 gene:Os03g0211600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0211600-01)
Sequence

ATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCG
CGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGA
GACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGC
GTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAG
GAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGG
AGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCC
GCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGG
GGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGGAGATGCTGTCCAGGAGGTTGATC
AAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCGAGCTGTTCGATTCAATGCGTGCC
TCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCCTTCTGGCTTGTTTTGTGCGAAGG
GGTTCTTTCGCCGATGCGATGAAGGTATTCGAGTTCATGAAGGGGAAAGGAATGGCAACC
GGGCATTCGTACACCTTGATACTCAAGGCTGTTGCCACTACTGAGGGCTACTTTGCAGCC
CTGAAAATGTTTGATGAAATTGAAGAGAGCGATAAGAAGAATGTCGATGTGATCGTTTAC
AACACGGTGATATCTGTGTGCGGAAGAGCAAAAGACTGGAGGCAGGTGGAGAGACTTTGG
AGAAGGCTAGGGGAGAATTCTTTGAGTGGAACCTTGATGACTTATGATTTGTTAGTTAGC
ACATTTGTCCAGTGTGGGCAGTCTGAGTTAGCAGTTGATGCTTATCAGGAAATGTTCAAA
AGTGGTATTGATCCAAGTGAAGATATACTGAAGGCCATCATTGCATCATGTACAAAAGAA
GGGAAATGGGAGTTTGCGCTTACCACATTCAGGAGAATGTTGAGTGCTGGAATGAAACCT
AGTATCATTGTGTTCAATTCCATAATCAACTCACTTGGTAAGGCCGGTGAAGATGAACTT
GCCTTTAGGATGTATCATCTGCTAACATCTTCAGGCCTTAAGCCTGATCAATATACATGG
AGTGCTTTACTGTCAGCGTTATATAGGTCTGGTCGTTGTTGGGATGTCCTAGATCTTTTT
CAAGGAATTAAGACCAAGCATTCAGC

Peptide Sequence

PEP ID

Os03t0211600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5817877:5819374:1 gene:Os03g0211600 transcript:Os03t0211600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0211600-01)
Sequence

MAAVWSGCSTSFSQELPPHPRGRRGGDGARIHPWSGGAGRDATTRHAEAARTVVVFARGR
VRVCRAAAPCVLEPDVAGKEEVGVAVWGMDDEPPVADGHRRHGLRRRPVRPAAVEEGPVA
AARSAASASASAAGSKSEVGGSRLHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRA
SGLQPSAHACNSLLACFVRRGSFADAMKVFEFMKGKGMATGHSYTLILKAVATTEGYFAA
LKMFDEIEESDKKNVDVIVYNTVISVCGRAKDWRQVERLWRRLGENSLSGTLMTYDLLVS
TFVQCGQSELAVDAYQEMFKSGIDPSEDILKAIIASCTKEGKWEFALTTFRRMLSAGMKP
SIIVFNSIINSLGKAGEDELAFRMYHLLTSSGLKPDQYTWSALLSALYRSGRCWDVLDLF
QGIKTKHS

Transcript Sequence

Transcript ID

Os03t0211600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5817877:5819374:1 gene:Os03g0211600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0211600-01)
Sequence

ATTGCTGCTCTCTCTTCTCCTCTTCTCTTCTCCCTCTTCCTCTTCTCCACCCTCCTATCC
GTTCTAGCGAGGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCA
GCCGAATCCCTCTTCCAGCGTGATTTCCAGAATCCCTTTGTCTTGTTGAGAGATTTTTGC
AGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCA
CGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAA
GAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTG
CAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCAT
GCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGG
ACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGA
GGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGG
CGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGA
GGGATGAGGAGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGA
GTGCCACCGAGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCT
GTAACTCCCTTCTGGCTTGTTTTGTGCGAAGGGGTTCTTTCGCCGATGCGATGAAGGTAT
TCGAGTTCATGAAGGGGAAAGGAATGGCAACCGGGCATTCGTACACCTTGATACTCAAGG
CTGTTGCCACTACTGAGGGCTACTTTGCAGCCCTGAAAATGTTTGATGAAATTGAAGAGA
GCGATAAGAAGAATGTCGATGTGATCGTTTACAACACGGTGATATCTGTGTGCGGAAGAG
CAAAAGACTGGAGGCAGGTGGAGAGACTTTGGAGAAGGCTAGGGGAGAATTCTTTGAGTG
GAACCTTGATGACTTATGATTTGTTAGTTAGCACATTTGTCCAGTGTGGGCAGTCTGAGT
TAGCAGTTGATGCTTATCAGGAAATGTTCAAAAGTGGTATTGATCCAAGTGAAGATATAC
TGAAGGCCATCATTGCATCATGTACAAAAGAAGGGAAATGGGAGTTTGCGCTTACCACAT
TCAGGAGAATGTTGAGTGCTGGAATGAAACCTAGTATCATTGTGTTCAATTCCATAATCA
ACTCACTTGGTAAGGCCGGTGAAGATGAACTTGCCTTTAGGATGTATCATCTGCTAACAT
CTTCAGGCCTTAAGCCTGATCAATATACATGGAGTGCTTTACTGTCAGCGTTATATAGGT
CTGGTCGTTGTTGGGATGTCCTAGATCTTTTTCAAGGAATTAAGACCAAGCATTCAGC