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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0211100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5798558:5801146:1 gene:Os03g0211100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0211100-01)
Sequence

ATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCA
AAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGA
GAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCC
TATGTCTTGTGGTGCGGTCATACAATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCT
GTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGT
AACCTGTTATCTTTCCGGCTAGTTTACAAGGGAAACCTCAAGTTCCCACGCAAGAACTAT
TTTCTGCTATGGATGGTTGAGAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGT
CATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCAT
CGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAAC
GTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAG
ATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCT
GCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCC
TTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAAT
TGA

Peptide Sequence

PEP ID

Os03t0211100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5798558:5801146:1 gene:Os03g0211100 transcript:Os03t0211100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0211100-01)
Sequence

MWSFASNAIAGSIRKKAQPSKCSQSNPDCSDDDVSSCASREEGLECPICWESFNLVENVP
YVLWCGHTMCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGNLKFPRKNY
FLLWMVESMNGERAKFHSPSHEERHSLCPSGGGPSSSQHHRRPAPRTESASGRERSVAGN
VFNTYSISASLQKIMLSFVQMTAKFPLVIIFLLIVLYAVPASVAVLVLYVLVTVLFALPS
FLILYFAYPSLDWLVREIFN

Transcript Sequence

Transcript ID

Os03t0211100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5798558:5801146:1 gene:Os03g0211100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0211100-01)
Sequence

CTTCTTCCCTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCC
CACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATC
TCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCA
GGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAA
CGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCC
TGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCC
AATATGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGTCA
TACAATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCT
TCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCTGTTATCTTTCCGGCT
AGTTTACAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTTCTGCTATGGATGGTTGA
GAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTT
ATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAAC
AGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCAT
CAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACT
CGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGT
ATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGC
TTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCAT
GTCATTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTG
GGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTT
GTAAGATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAGGTTTTACTGT