Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0210400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5760848:5767440:-1 gene:Os03g0210400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing protein, HAT helix domain containing protein. (Os03t0210400-01)
Sequence	ATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCGCCGGCCAG GGCGCTCACGATTCCGGTAGCGCGGGGGCTGGCGCCGCAGCCTCTTCCATTGCGTCTTTC GATTCGGCCACTGCAAACCCTGACGCAAACGTTTACAGTCAGAATCCGAGCTCCGTCCCG CAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACGCGCCGCTA AACGGGACATCGGGCCAGGTGGTAGATTACCAGTCTGCGGGGGCTGCAGAGAACGGCGCC GCCACAAACGAGATGGGTGAGCCGGTTCCCGAGCAGTCCTATGCGGATGCTGTGCTTTCA GCAGAAGAAGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCAATGCTTGG ACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAACTAAGAAAA GTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGAAATATGCA GATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTT CTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACA TATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACA GACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCA TGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACACAGCTTGAT CGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAATACTTACC TCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGCTTGATGGA GAGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTTCAACAGAG GCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAG TATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAG CCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAA GAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTGCTAGTTAT TCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAGAACTAGCA AACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCAGGCAGAGATCCATCTG TTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTAGAATACCAG CATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCATTCTAATATG GAGCACCGATTGGGAGATAAAGAATCTGCTTGCTCAATTTATGAGAAGGCCATTGCCGCT GAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTACTCACGATTC TTATCTTTGGCCATCGGTGACATCGAGAAGGCAAAGGAGACGCTAACTGGTTTTCTCGAA CAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACTAGAGTCGATCCTTCCA TCTGAAAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTTTCTTACAGCTGAACCA ACCGAAGGGGAAGTCACAAGTCTAGCTGACAAGGAAGACATATCTTCCATATTTTTAGAG TTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACT CATTTTTCGCGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATC ATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACT GATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGGCAACAA TGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGC CATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGCGCCTATCCTCCAACATAC CCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCA CCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAA CCATATTATGGAACAGGAACATACTACTGA

Peptide Sequence

PEP ID	Os03t0210400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5760848:5767440:-1 gene:Os03g0210400 transcript:Os03t0210400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing protein, HAT helix domain containing protein. (Os03t0210400-01)
Sequence	MEQDQGVAAAAASENPSAGQGAHDSGSAGAGAAASSIASFDSATANPDANVYSQNPSSVP QADGAQGADASVYPADHAPLNGTSGQVVDYQSAGAAENGAATNEMGEPVPEQSYADAVLS AEEARLWNAVTANCLDFNAWTALIDETEKTAESNILKLRKVYDAFLAEFPLCFGYWKKYA DHEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAISTYEDPDIIRRLFERGLAYVGT DYRSNILWDEYIKYEESLQAWSHLAIIYTRILEHPITQLDRYFHCLKELAATRSLSEILT SEEAAMYSVTAENTAQTLDGETQPGDVDMSAQPEISGSTEADNLAKYVSVREEMYNKAKE YESKIIGFELAIRRPYFHVKPLDNPELENWHNYLDLIEKEEDINKVIKLYERCVIACASY SEFWIRYVLCMEARGSIELANNALARATHVFVKKQAEIHLFSARFKELSGDVSGARVEYQ HLYSDLYPGLLEAIVKHSNMEHRLGDKESACSIYEKAIAAEKEKDRSQILPTLLIQYSRF LSLAIGDIEKAKETLTGFLEQCDLTKSIIEAIMQLESILPSEKRIEFLDSLVEKFLTAEP TEGEVTSLADKEDISSIFLEFLDLFGDAQAIKKATNRHLTHFSRKRSMLSSKKRRADDVI MSDRDKLARIGDGTQPVVGTDPNAHNPPVWPATSEASGQQWGAAYAPQATYPAYGTYDYS HQMPQSAPQAAAYGAYPPTYPAQAYTQQTYAQPSAMAVAAPAPAVAPAAAYPQQPVAAQQ PYYGTGTYY

Transcript Sequence

Transcript ID	Os03t0210400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5760848:5767440:-1 gene:Os03g0210400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing protein, HAT helix domain containing protein. (Os03t0210400-01)
Sequence	ACCTTTCCCACGCCGCTGATACTGATAGCCTCCCACCGATCCAATTCCAACCCTAACCCT CCGCCTCCGCCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGG CACCTCATCCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGCC ACGGTCCGCAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAA TCCAAGCGCCGGCCAGGGCGCTCACGATTCCGGTAGCGCGGGGGCTGGCGCCGCAGCCTC TTCCATTGCGTCTTTCGATTCGGCCACTGCAAACCCTGACGCAAACGTTTACAGTCAGAA TCCGAGCTCCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGC CGACCACGCGCCGCTAAACGGGACATCGGGCCAGGTGGTAGATTACCAGTCTGCGGGGGC TGCAGAGAACGGCGCCGCCACAAACGAGATGGGTGAGCCGGTTCCCGAGCAGTCCTATGC GGATGCTGTGCTTTCAGCAGAAGAAGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTT AGACTTCAATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATAT CTTGAAACTAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATA CTGGAAGAAATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGT TTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCA GTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTT GGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGA AGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCC TATAACACAGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTT ATCAGAAATACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGC TCAGACGCTTGATGGAGAGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAAT TTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTA TAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACC ATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGA TCTTATTGAGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTAT TGCATGTGCTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGG AAGCATAGAACTAGCAAACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCA GGCAGAGATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGC ACGTGTAGAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGT TAAGCATTCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTTGCTCAATTTATGA GAAGGCCATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGAT TCAGTACTCACGATTCTTATCTTTGGCCATCGGTGACATCGAGAAGGCAAAGGAGACGCT AACTGGTTTTCTCGAACAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACT AGAGTCGATCCTTCCATCTGAAAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTT TCTTACAGCTGAACCAACCGAAGGGGAAGTCACAAGTCTAGCTGACAAGGAAGACATATC TTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTAC CAATCGGCATCTTACTCATTTTTCGCGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAG AGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCA GCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGA AGCATCGGGGCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGG AACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGCGC CTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGC AATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACC TGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATT CAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAA TTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGT ACTACTAGCGTTACCAGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATT TTCCTGCTAGCATAATGGTCCATTGTTTTCATCTCT