Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0209800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5735003:5746155:1 gene:Os03g0209800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Spin6.3 description:RhoGAP domain containing protein. (Os03t0209800-01)
Sequence	ATGTCAGCTTCGGAGTTCAGGATTCCTTATCAGCAAGTATCATCTTCACAGACTGCTGAG AATGCAGGTCAGTACAAGATCTGCCGGTGTGGGGAAGGAGACCCAAACACATCTGAAACT GGTGACAGTTCGCCAACTAGTTGTCCTAATTGCCAGGTTCTTAAGAGTGGGCATCTACTG CTCTCATCTAAAGGAATTGGTTGGACAACATGGAAAAAGCGCTGGTTTATTCTTACAAGG GCATCATTAGTGTTCTTCAGAAGTGATCCTAATGCACCTGTCAGAGGAAATGAACCGGTT GTTACACTAGGTGGAATTGACTTGAATAACACCGGAAGTGTTGTGGTCAAAGAAGACAGG AAACTTTTAACGGTGTTATTTCCTGATAGCCGTGACGGCCGAACCTTCACTCTGAAGGCG GAAACTACAGAAGAGCTCAATGAATGGAAAAGTGCATTAGAGAATGCTCTGGCACAAGCA CCTGCTGTAGCAAATGCTGTTGGCCAAAATCCAATTTTCAGCACTGACATAGCAGAGCCT GCTGAAGCTCCAGCTGAACAGCCGGACGACAAATCTGTTATTGGTAGACCTGCAGAGTTT GCCCTTGTAGATGCTGATGGTAGTCCATCTTTCCTGGAGAAGGCCTTGAAGTTCATTGAA GATTATGGTGTCAAGGTGGAAGGAATCCTCCGTCAGTCTGCTGATGTTGAAGAAGTCAAA CGCAGAGTCCAAGACTATGAAAAGGGGAAAAATGAGTTCTCCCCAGAAGAGGATGCACAT GTTATTGGTGACTGTATCAAGTATGTTCTTCGAGAGATGCCATCATCTCCTGTTCCTGCA CCATGTTGCACTGCGCTGGTTGGAGCTTACCGAACCGACAAAACAAAAAGGCTTGATGCT ATGAGTAAAGTGATTTATGAAGTTTTTCCGGAACCAAACCAGCAACTATTGCAGAGGATT CTTAAGATGATGCAGATTGTTGGATCACACAAAGCTGTGAATAGGATGTCTCCATCGGCT TTGGCGGCTTGCATGGCACCACTCCTTCTCCGACCTCTTCTTCTCGGTGAATGTGAAATT GATAGTGACTTTAGTATGGCTGGGGATGGTTCATTCCAGCTGCTTCAAGCTGCAGCTGCT GCCAACCATGCTCAAGCAATTGTCATCATTATGCTCGAGGAATACGACGAGATATTTGAT GACTTGGAAGACGGTTCCTGCTCTTCAGATGCATATACTGATTCAGAAGATGGCGATGTT GACAAGGAATATTCTACGGACAATGATGTGGATGGCTCTTATGATTCTGGTGAAGATAAC ATTGAAGAAGACATGGAAGATGATACTGAGTACTCCTCTGGTGGCAGTGAATGTGATGAC AAGGTTAAAAGGAATAACTCTGGCAAGGCATCTAATGTGGAGAATACTTCCCAAATGGAG AGCAATGATCCATCCCATCGAAAATTACACGAATCAAATGGATCCACAGATCAAATAGAA AAGTCAAATGTTCGCGCATCATCATCAAGAGCAAAATTTATGGAGAAATCAAGCTCAAGA AATAAGAGCAAAAAGACCTTATTGGGCCGTGCTTCAGCAAGAAGAGACCTGTCGGCAGAT GAGACTGACTTTTGCAGTGATGATGAGACTCTTATTGAGAAGCTTGAGAACAACAAGACG GATCTCCAATCTAAAATTACAAAGGAGGTGAAAGAAAATTCAATCCTCCAGGCAAGTCTT GGAAGGAGGAAAGAAGAATTGCATGAACGCCGCTTAGCACTTGAAAAAGAAGTGGAAAAT TTGCGGGATCAGCTACAGAAGGAGAGAAAATTGAGGGCCTCATTGGAGTCTGGGCTGATG AATTTGCGTAGAGGACAGGTGTCCTTCCCATCAACAATTGATAGCAAGACTAAGGCTGAT CTTGAGGAAGTTGCTACTGCTGAAGCTGATATTTTGAACTTGAAGCAAAAGGTTTCTGAT CTCCGTGGACAACTCAACAACAATGTCCAGATGAGCTCCACCTCATTATGTGACTCTTGC AACAAACGACTCCTAAGTACAGACAAGCTTTTCGAAGATGAACAGAATACTTCACCATCA AATGTTGGGCCCAATTCTATGTCTGACATGGCATCGGCTACAGACATGGCAGATATTGAG CAATCAAGGAAGCAAACCACACAACATTCATCTTCTTCCATAGACAAGCCAACTCTCCAC AAGCATCAAAAGAGTATTGCATCCAATGAACAATCAAGTACCATCAGCCAAAGGGCTCAA AGGATCTTATCTTCTAAGGGTGGGATTATGAAGGATGGCCAAGATGGATCATTTACATCA AAGTGGAACCTTGCACAGAAACAATACTCAAACAATCCACTGTTAGGCAGGCTTGGATCA AATGCCTATTCGAGCACTAGAACAGAGGAATCTGGGGCAGTGCCATTTGCATTAGCCAAG CTGACAAACCGGCTCAATTTTTTGAAAGAAAGGAGGGCGATTCTTGCAAGTGAGATGCAA AACTTAAATTTGGCTCGCCCACCAGGGCCTACAGCTCCAGCACCAAAGAAAGACTCCACA TGA

Peptide Sequence

PEP ID	Os03t0209800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5735003:5746155:1 gene:Os03g0209800 transcript:Os03t0209800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Spin6.3 description:RhoGAP domain containing protein. (Os03t0209800-01)
Sequence	MSASEFRIPYQQVSSSQTAENAGQYKICRCGEGDPNTSETGDSSPTSCPNCQVLKSGHLL LSSKGIGWTTWKKRWFILTRASLVFFRSDPNAPVRGNEPVVTLGGIDLNNTGSVVVKEDR KLLTVLFPDSRDGRTFTLKAETTEELNEWKSALENALAQAPAVANAVGQNPIFSTDIAEP AEAPAEQPDDKSVIGRPAEFALVDADGSPSFLEKALKFIEDYGVKVEGILRQSADVEEVK RRVQDYEKGKNEFSPEEDAHVIGDCIKYVLREMPSSPVPAPCCTALVGAYRTDKTKRLDA MSKVIYEVFPEPNQQLLQRILKMMQIVGSHKAVNRMSPSALAACMAPLLLRPLLLGECEI DSDFSMAGDGSFQLLQAAAAANHAQAIVIIMLEEYDEIFDDLEDGSCSSDAYTDSEDGDV DKEYSTDNDVDGSYDSGEDNIEEDMEDDTEYSSGGSECDDKVKRNNSGKASNVENTSQME SNDPSHRKLHESNGSTDQIEKSNVRASSSRAKFMEKSSSRNKSKKTLLGRASARRDLSAD ETDFCSDDETLIEKLENNKTDLQSKITKEVKENSILQASLGRRKEELHERRLALEKEVEN LRDQLQKERKLRASLESGLMNLRRGQVSFPSTIDSKTKADLEEVATAEADILNLKQKVSD LRGQLNNNVQMSSTSLCDSCNKRLLSTDKLFEDEQNTSPSNVGPNSMSDMASATDMADIE QSRKQTTQHSSSSIDKPTLHKHQKSIASNEQSSTISQRAQRILSSKGGIMKDGQDGSFTS KWNLAQKQYSNNPLLGRLGSNAYSSTRTEESGAVPFALAKLTNRLNFLKERRAILASEMQ NLNLARPPGPTAPAPKKDST

Transcript Sequence

Transcript ID	Os03t0209800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5735003:5746155:1 gene:Os03g0209800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Spin6.3 description:RhoGAP domain containing protein. (Os03t0209800-01)
Sequence	AGAGAGAGAGAGAGAGAGAGGAGCGGAAGAGAAGGGGAGAACCAGGAGGAGGAGGAGGAG GAGGAGGAGGCGGTGGGAGGGATCGATGGCGTCGCGCGTGCTCCCACGAGAGGGTTCCTG ATCGCGTCCGTGGTGGTTCGCAGGTCCAACTAACGGCTTAAAAGCTTATAGGCTGATGCT TAGGTTGGATGTGGAAGCCAACTCGACAGATTTGAAGCTACTGCATGAGGGGCTAATAAA TAAGTTTGCATGCTTCAATTTCTTGTGTCTCTAGAGAAAAATCAACTCATTGGCGGAAAA AAAAAAACATCCTGGTGCGTTCATAAGTCAGCCATCTAGAGGACAATGTCAGCTTCGGAG TTCAGGATTCCTTATCAGCAAGTATCATCTTCACAGACTGCTGAGAATGCAGGTCAGTAC AAGATCTGCCGGTGTGGGGAAGGAGACCCAAACACATCTGAAACTGGTGACAGTTCGCCA ACTAGTTGTCCTAATTGCCAGGTTCTTAAGAGTGGGCATCTACTGCTCTCATCTAAAGGA ATTGGTTGGACAACATGGAAAAAGCGCTGGTTTATTCTTACAAGGGCATCATTAGTGTTC TTCAGAAGTGATCCTAATGCACCTGTCAGAGGAAATGAACCGGTTGTTACACTAGGTGGA ATTGACTTGAATAACACCGGAAGTGTTGTGGTCAAAGAAGACAGGAAACTTTTAACGGTG TTATTTCCTGATAGCCGTGACGGCCGAACCTTCACTCTGAAGGCGGAAACTACAGAAGAG CTCAATGAATGGAAAAGTGCATTAGAGAATGCTCTGGCACAAGCACCTGCTGTAGCAAAT GCTGTTGGCCAAAATCCAATTTTCAGCACTGACATAGCAGAGCCTGCTGAAGCTCCAGCT GAACAGCCGGACGACAAATCTGTTATTGGTAGACCTGCAGAGTTTGCCCTTGTAGATGCT GATGGTAGTCCATCTTTCCTGGAGAAGGCCTTGAAGTTCATTGAAGATTATGGTGTCAAG GTGGAAGGAATCCTCCGTCAGTCTGCTGATGTTGAAGAAGTCAAACGCAGAGTCCAAGAC TATGAAAAGGGGAAAAATGAGTTCTCCCCAGAAGAGGATGCACATGTTATTGGTGACTGT ATCAAGTATGTTCTTCGAGAGATGCCATCATCTCCTGTTCCTGCACCATGTTGCACTGCG CTGGTTGGAGCTTACCGAACCGACAAAACAAAAAGGCTTGATGCTATGAGTAAAGTGATT TATGAAGTTTTTCCGGAACCAAACCAGCAACTATTGCAGAGGATTCTTAAGATGATGCAG ATTGTTGGATCACACAAAGCTGTGAATAGGATGTCTCCATCGGCTTTGGCGGCTTGCATG GCACCACTCCTTCTCCGACCTCTTCTTCTCGGTGAATGTGAAATTGATAGTGACTTTAGT ATGGCTGGGGATGGTTCATTCCAGCTGCTTCAAGCTGCAGCTGCTGCCAACCATGCTCAA GCAATTGTCATCATTATGCTCGAGGAATACGACGAGATATTTGATGACTTGGAAGACGGT TCCTGCTCTTCAGATGCATATACTGATTCAGAAGATGGCGATGTTGACAAGGAATATTCT ACGGACAATGATGTGGATGGCTCTTATGATTCTGGTGAAGATAACATTGAAGAAGACATG GAAGATGATACTGAGTACTCCTCTGGTGGCAGTGAATGTGATGACAAGGTTAAAAGGAAT AACTCTGGCAAGGCATCTAATGTGGAGAATACTTCCCAAATGGAGAGCAATGATCCATCC CATCGAAAATTACACGAATCAAATGGATCCACAGATCAAATAGAAAAGTCAAATGTTCGC GCATCATCATCAAGAGCAAAATTTATGGAGAAATCAAGCTCAAGAAATAAGAGCAAAAAG ACCTTATTGGGCCGTGCTTCAGCAAGAAGAGACCTGTCGGCAGATGAGACTGACTTTTGC AGTGATGATGAGACTCTTATTGAGAAGCTTGAGAACAACAAGACGGATCTCCAATCTAAA ATTACAAAGGAGGTGAAAGAAAATTCAATCCTCCAGGCAAGTCTTGGAAGGAGGAAAGAA GAATTGCATGAACGCCGCTTAGCACTTGAAAAAGAAGTGGAAAATTTGCGGGATCAGCTA CAGAAGGAGAGAAAATTGAGGGCCTCATTGGAGTCTGGGCTGATGAATTTGCGTAGAGGA CAGGTGTCCTTCCCATCAACAATTGATAGCAAGACTAAGGCTGATCTTGAGGAAGTTGCT ACTGCTGAAGCTGATATTTTGAACTTGAAGCAAAAGGTTTCTGATCTCCGTGGACAACTC AACAACAATGTCCAGATGAGCTCCACCTCATTATGTGACTCTTGCAACAAACGACTCCTA AGTACAGACAAGCTTTTCGAAGATGAACAGAATACTTCACCATCAAATGTTGGGCCCAAT TCTATGTCTGACATGGCATCGGCTACAGACATGGCAGATATTGAGCAATCAAGGAAGCAA ACCACACAACATTCATCTTCTTCCATAGACAAGCCAACTCTCCACAAGCATCAAAAGAGT ATTGCATCCAATGAACAATCAAGTACCATCAGCCAAAGGGCTCAAAGGATCTTATCTTCT AAGGGTGGGATTATGAAGGATGGCCAAGATGGATCATTTACATCAAAGTGGAACCTTGCA CAGAAACAATACTCAAACAATCCACTGTTAGGCAGGCTTGGATCAAATGCCTATTCGAGC ACTAGAACAGAGGAATCTGGGGCAGTGCCATTTGCATTAGCCAAGCTGACAAACCGGCTC AATTTTTTGAAAGAAAGGAGGGCGATTCTTGCAAGTGAGATGCAAAACTTAAATTTGGCT CGCCCACCAGGGCCTACAGCTCCAGCACCAAAGAAAGACTCCACATGAGAAGTTAGAATT TTAACATGGCATCATTCTCAGGCTACGGATATTTGTACTGTCAAGTGTCAAATGTGAGCG ATGCACATATATATGATGGACGCTACACAAGCTATTTCACATCCTGCTTCTGGAAGATGG GGGTGGTGCAATATTGTAACCTTACCGGAGGTTACCCAGTCCGAGATGCGTCATCATGCA AGAAAATAAGAGGATGCTGGTGGTGTTTACATAAATCGTGGATTGGACAAATATCCATAG TTCTAGGTAAACGTAATCTGTAAATTTATCAGGTTGTCTTGTTTTTACCACGATGTTTCA TAAGTAATTTTGCAGCGACATTGATTTATCCGGGTTGCACCATTTCATGTAGAAAATAGT TAAACCACAGTGCTATTGCAAATGCAATTACCTGCTGCATTCGACGCCC