Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0208500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5655157:5659147:-1 gene:Os03g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 2 description:Integral membrane protein. (Os03t0208500-01);Integral membrane protein, Metal ion transport (Os03t0208500-02)
Sequence	ATGGCGTCGCGCGACCTCGCCGAGAGCCTCCTCCCCGTGGGGGGCGGCGCCGCCACCGCC ACCGCCACCGCCACCGCCCACGACGAGTACGACGAGCGCGCGTACGACTCCGACGACAAG GTCTCCATCGCCGTCTCGGACTCCGACTCGGAGGACGGCGGCGGCGGCGGCGGCGACGCC ATGCGCCCGGCCTTCTCGTGGCGCAAGCTGTGGCGGTTCACGGGGCCCGGGTTCCTCATG TGCATCGCGTTCCTCGACCCGGGGAACCTGGAGGGCGACCTGCAGGCCGGCGCGGCGGCG GGGTACCAGCTGCTGTGGCTGCTGCTGTGGGCGACGGTCATGGGCGCCCTGGTGCAGCTG CTCTCCGCGCGGCTCGGGGTCGCCACGGGGAAGCACCTCGCCGAGCTCTGCAGGGAGGAG TACCCGCCCTGGGCCACGCGCGCGCTCTGGGCCATGACCGAGCTCGCGCTCGTCGGCGCG GACATCCAGGAGGTGATTGGCAGCGCGATTGCCATCAAGATCCTCTCCGCTGGCACCGTC CCGCTCTGGGGCGGCGTCGTCATCACCGCGTTCGATTGCTTCATCTTTTTATTCCTGGAG AACTATGGAGTGAGAAAATTGGAAGCATTTTTCGGAGTCCTGATTGCAGTCATGGCAGTA TCATTTGCAATTATGTTTGGTGAAACAAAGCCAAGTGGCAAGGAGCTTCTGATTGGTTTG GTGGTTCCAAAGTTGAGTTCAAGGACAATCAAACAAGCAGTTGGAATTGTGGGCTGCATA ATCATGCCCCACAATGTCTTCTTGCACTCAGCACTAGTGCAGTCAAGGAAGATTGACACA AACAAGAAATCCCGTGTTCAAGAAGCAGTGTTCTATTACAACATTGAGTCCATTCTTGCC CTCATTGTCTCGTTCTTTATTAACATCTGTGTCACAACAGTTTTTGCGAAAGGATTTTAT GGATCTGAACAAGCTGATGGTATAGGTCTTGAGAATGCTGGACAGTACTTACAGCAGAAA TATGGGACTGCATTCTTTCCTATACTGTATATCTGGGCTATTGGGCTGTTAGCATCTGGA CAGAGTAGCACTATTACTGGCACATATGCAGGCCAATTTGTTATGGGAGGCTTCCTTAAT CTTCGGTTGAAGAAGTGGTTAAGAGCAATGATTACTCGAAGCTTTGCAATTATTCCAACT ATGATTGTGGCTTTATTTTTTGACACGGAGGATCCTACAATGGACATTCTGAATGAGGCA CTCAATGTTCTTCAATCCATACAGATACCATTTGCACTGATTCCTCTCATCACACTTGTC TCAAAGGAGCAAGTCATGGGATCATTTGTGGTTGGTCCTATCACAAAAGTGATTAGCTGG ATTGTTACAGTATTCTTGATGCTCATCAATGGGTATCTTATACTGTCCTTCTATGCCACT GAAGTCCGGGGAGCATTGGTTCGGTCAAGCTTGTGCGTTGTATTGGCAGTTTACCTTGCA TTCATCGTCTATCTTATCATGCGAAATACCTCACTGTATTCTCGCCTCCGCTCAGCAATG ACAAAGAGCACATGA

Peptide Sequence

PEP ID	Os03t0208500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5655157:5659147:-1 gene:Os03g0208500 transcript:Os03t0208500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 2 description:Integral membrane protein. (Os03t0208500-01);Integral membrane protein, Metal ion transport (Os03t0208500-02)
Sequence	MASRDLAESLLPVGGGAATATATATAHDEYDERAYDSDDKVSIAVSDSDSEDGGGGGGDA MRPAFSWRKLWRFTGPGFLMCIAFLDPGNLEGDLQAGAAAGYQLLWLLLWATVMGALVQL LSARLGVATGKHLAELCREEYPPWATRALWAMTELALVGADIQEVIGSAIAIKILSAGTV PLWGGVVITAFDCFIFLFLENYGVRKLEAFFGVLIAVMAVSFAIMFGETKPSGKELLIGL VVPKLSSRTIKQAVGIVGCIIMPHNVFLHSALVQSRKIDTNKKSRVQEAVFYYNIESILA LIVSFFINICVTTVFAKGFYGSEQADGIGLENAGQYLQQKYGTAFFPILYIWAIGLLASG QSSTITGTYAGQFVMGGFLNLRLKKWLRAMITRSFAIIPTMIVALFFDTEDPTMDILNEA LNVLQSIQIPFALIPLITLVSKEQVMGSFVVGPITKVISWIVTVFLMLINGYLILSFYAT EVRGALVRSSLCVVLAVYLAFIVYLIMRNTSLYSRLRSAMTKST

Transcript Sequence

Transcript ID	Os03t0208500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5655157:5659147:-1 gene:Os03g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 2 description:Integral membrane protein. (Os03t0208500-01);Integral membrane protein, Metal ion transport (Os03t0208500-02)
Sequence	CCCACCTCGCCGTCGCCGCACTCCCCCCCACCATGGCGTCGCGCGACCTCGCCGAGAGCC TCCTCCCCGTGGGGGGCGGCGCCGCCACCGCCACCGCCACCGCCACCGCCCACGACGAGT ACGACGAGCGCGCGTACGACTCCGACGACAAGGTCTCCATCGCCGTCTCGGACTCCGACT CGGAGGACGGCGGCGGCGGCGGCGGCGACGCCATGCGCCCGGCCTTCTCGTGGCGCAAGC TGTGGCGGTTCACGGGGCCCGGGTTCCTCATGTGCATCGCGTTCCTCGACCCGGGGAACC TGGAGGGCGACCTGCAGGCCGGCGCGGCGGCGGGGTACCAGCTGCTGTGGCTGCTGCTGT GGGCGACGGTCATGGGCGCCCTGGTGCAGCTGCTCTCCGCGCGGCTCGGGGTCGCCACGG GGAAGCACCTCGCCGAGCTCTGCAGGGAGGAGTACCCGCCCTGGGCCACGCGCGCGCTCT GGGCCATGACCGAGCTCGCGCTCGTCGGCGCGGACATCCAGGAGGTGATTGGCAGCGCGA TTGCCATCAAGATCCTCTCCGCTGGCACCGTCCCGCTCTGGGGCGGCGTCGTCATCACCG CGTTCGATTGCTTCATCTTTTTATTCCTGGAGAACTATGGAGTGAGAAAATTGGAAGCAT TTTTCGGAGTCCTGATTGCAGTCATGGCAGTATCATTTGCAATTATGTTTGGTGAAACAA AGCCAAGTGGCAAGGAGCTTCTGATTGGTTTGGTGGTTCCAAAGTTGAGTTCAAGGACAA TCAAACAAGCAGTTGGAATTGTGGGCTGCATAATCATGCCCCACAATGTCTTCTTGCACT CAGCACTAGTGCAGTCAAGGAAGATTGACACAAACAAGAAATCCCGTGTTCAAGAAGCAG TGTTCTATTACAACATTGAGTCCATTCTTGCCCTCATTGTCTCGTTCTTTATTAACATCT GTGTCACAACAGTTTTTGCGAAAGGATTTTATGGATCTGAACAAGCTGATGGTATAGGTC TTGAGAATGCTGGACAGTACTTACAGCAGAAATATGGGACTGCATTCTTTCCTATACTGT ATATCTGGGCTATTGGGCTGTTAGCATCTGGACAGAGTAGCACTATTACTGGCACATATG CAGGCCAATTTGTTATGGGAGGCTTCCTTAATCTTCGGTTGAAGAAGTGGTTAAGAGCAA TGATTACTCGAAGCTTTGCAATTATTCCAACTATGATTGTGGCTTTATTTTTTGACACGG AGGATCCTACAATGGACATTCTGAATGAGGCACTCAATGTTCTTCAATCCATACAGATAC CATTTGCACTGATTCCTCTCATCACACTTGTCTCAAAGGAGCAAGTCATGGGATCATTTG TGGTTGGTCCTATCACAAAAGTGATTAGCTGGATTGTTACAGTATTCTTGATGCTCATCA ATGGGTATCTTATACTGTCCTTCTATGCCACTGAAGTCCGGGGAGCATTGGTTCGGTCAA GCTTGTGCGTTGTATTGGCAGTTTACCTTGCATTCATCGTCTATCTTATCATGCGAAATA CCTCACTGTATTCTCGCCTCCGCTCAGCAATGACAAAGAGCACATGAGCGCCTTCAGAAG TTTTTTGAACAAAAAAAGGGCAGGACAATTCCCTTATCGGCCTTCAGAACTGTTAGTTTC TACCATGGTGAAGCAGATCATATTAGAAGAAAGATGCTCCCCCATGTAAAAACTTGTACT ACTGCCTGCTTGTATTAGCTCCAGGAAGAAGCATAGTAAAAAAGTCTATTTGTATTAGCT CCAGGAAGAAGCCTACCGATGAACTACACTGTATATTCCTCTGCTGTTGTATAAGTGCAT TAGCGAATTGGTTGGGCTTCTCCACTTAGGGTTGGGATAAACCACAGTGGCATTCATGTG TTTGAGGTTATAAACAGCAGTAGATAACTTTGTTACCTTTCTCATTTTTTGGATGATGAT GATCTGCAGAATTGCTGTTGACACTTG