Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0206900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5594051:5595994:1 gene:Os03g0206900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0206900-01)
Sequence

ATGACGAGCGCCTCCGAGCTCTTCACCGCCCGCCGCGCCCGCGCCGCCCGCCTCTCCGAC
CCCGATCCGGACCCGGATCCGCCTGCGGACGCGCTCCATGACCCGCACGGCCTCGCCGAT
CGCCGCGGCCGGCGCCGGGGCTGCCGCCCGCGCCGCCAGCTCGACGCCGCCGGGGACGTC
CGCCAGCACCTGCACACCGGGGCCCCGCCCTCCCGCCGCCGCGCTTCGTACACCGATCGT
GTCTTATCATACATAGACAATAGCAACATTGGGGACTCTGCAACTAGGAGGAACCGACTG
GATAGGCTGATGTTCAGAACAAATGAGCGGCTTCCTGGTGCTGTACTGCAAGCACAAGCA
CGTGTTCTAGAGAGACTGAGAGGCATTTCTATTGGTTCATCTGTGTCAAGGCCATCTATC
ACATTGGATGAATTTTCAGCTACTGATGTGTTTAGAATCATTGACTTCGGGAACAGGGAT
GCTCCATATGAAGCAAATAGGTCCAGCTCATCATTGGCCCATCCAAGTAGCGAGTCAGAT
GAAGAAAGGTCACCCATTGACACCAGTTCCTTAAAAAGATCACGTGGGCTGAGCAAGGCG
GCCTTCCTTCGGCTACAGATAGAGATTTTTGAGGCAAGCAAAGATGACAACAGGGAGGCA
TCACCAGAATGCTCGATTTGCCTTGATGGATTCTATGACGGAGATGAGCTCATAAAGCTA
CGTTGTGGGCACAGGTTTCACTCGAATTGCCTGGAGCCATGGGTACGGAAATGTGCTGAT
TGCCCATATTGTCGAACAAACATACAGTCACGATCCTGA

Peptide Sequence

PEP ID

Os03t0206900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5594051:5595994:1 gene:Os03g0206900 transcript:Os03t0206900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0206900-01)
Sequence

MTSASELFTARRARAARLSDPDPDPDPPADALHDPHGLADRRGRRRGCRPRRQLDAAGDV
RQHLHTGAPPSRRRASYTDRVLSYIDNSNIGDSATRRNRLDRLMFRTNERLPGAVLQAQA
RVLERLRGISIGSSVSRPSITLDEFSATDVFRIIDFGNRDAPYEANRSSSSLAHPSSESD
EERSPIDTSSLKRSRGLSKAAFLRLQIEIFEASKDDNREASPECSICLDGFYDGDELIKL
RCGHRFHSNCLEPWVRKCADCPYCRTNIQSRS

Transcript Sequence

Transcript ID

Os03t0206900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5594051:5595994:1 gene:Os03g0206900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0206900-01)
Sequence

CTTGTCCCGTCCGTTCGGTCGCCGCGTCGAGGAGGCAGGGAGCTCGCGGCCTCGCACCAC
CGCCGCCACCCCGCCATGACGAGCGCCTCCGAGCTCTTCACCGCCCGCCGCGCCCGCGCC
GCCCGCCTCTCCGACCCCGATCCGGACCCGGATCCGCCTGCGGACGCGCTCCATGACCCG
CACGGCCTCGCCGATCGCCGCGGCCGGCGCCGGGGCTGCCGCCCGCGCCGCCAGCTCGAC
GCCGCCGGGGACGTCCGCCAGCACCTGCACACCGGGGCCCCGCCCTCCCGCCGCCGCGCT
TCGTACACCGATCGTGTCTTATCATACATAGACAATAGCAACATTGGGGACTCTGCAACT
AGGAGGAACCGACTGGATAGGCTGATGTTCAGAACAAATGAGCGGCTTCCTGGTGCTGTA
CTGCAAGCACAAGCACGTGTTCTAGAGAGACTGAGAGGCATTTCTATTGGTTCATCTGTG
TCAAGGCCATCTATCACATTGGATGAATTTTCAGCTACTGATGTGTTTAGAATCATTGAC
TTCGGGAACAGGGATGCTCCATATGAAGCAAATAGGTCCAGCTCATCATTGGCCCATCCA
AGTAGCGAGTCAGATGAAGAAAGGTCACCCATTGACACCAGTTCCTTAAAAAGATCACGT
GGGCTGAGCAAGGCGGCCTTCCTTCGGCTACAGATAGAGATTTTTGAGGCAAGCAAAGAT
GACAACAGGGAGGCATCACCAGAATGCTCGATTTGCCTTGATGGATTCTATGACGGAGAT
GAGCTCATAAAGCTACGTTGTGGGCACAGGTTTCACTCGAATTGCCTGGAGCCATGGGTA
CGGAAATGTGCTGATTGCCCATATTGTCGAACAAACATACAGTCACGATCCTGACTACCT
TAGTTCTGCATTGGCAGTTTGGCACTCTCATTAGAACTGTAATTAACAGTAAGATGTATT
GTTGTAATTCAGTGTTATGTGCATGCCTGTTACCCGGAGTTGGTATGACATCACTCTATT
GAATTTCATTGTTGCCACTGGAGTTGTGCTGC