Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0206600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5586002:5588859:1 gene:Os03g0206600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0206600-01)
Sequence

ATGTTCGCGAGCAGGCCGGCGGTGCACCCGGTGGAGGCGCCGCCGCCGCCGGATCCGGCG
GAGCAGCCGAGGGGGGTGCTGATGAAGGACCTGCCCGGGATGCCCGGGACGGCGGGGGGG
CTGGGGCTCCGCCTCGCGCAGTTCGCCTTCGCCGCCGTCGCCCTCGCCGTCATGGCGTCC
ACCAACGACTTCCCTTCCGTCACATCGTTCTGCTTTCTTGTTGCGGCAGCCATTTTGCAA
TGTCTCTGGAGCTTTTCACTAGCAATTGTGGACATATATGCACTGCTTGTTAAGCGTTGC
TTACGAAATCGCCGGGCTGTTTGTCTATTTGCAATTGGTGATGGGATCACAGCAGCACTG
ACCTTCAGTGCCGCATGTGCGTCATCTGGCATCACCGTGTTGATTGATAATGATCTAGAC
CTATGCTCGGAAAATCACTGCGCAAGTTTTGAAAGTGCGACAGCAATGGCGTTTCTTAGC
TGGTTTGCTCTTTCGCCATCCTTTCTATTGAATTTCTGGTCAATGGCTTCTGGATGA

Peptide Sequence

PEP ID

Os03t0206600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5586002:5588859:1 gene:Os03g0206600 transcript:Os03t0206600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0206600-01)
Sequence

MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS
TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL
TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMASG

Transcript Sequence

Transcript ID

Os03t0206600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5586002:5588859:1 gene:Os03g0206600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0206600-01)
Sequence

ACTAGCCGCACGCGTTTGGCTGCTTGCTGCGGTTGCTCGCACTCCTCCACCTCCAAAGGC
TCCAACAAGAACAAGAACAAATCCAAGTGAGGCCCTCGCCCACCCACCGACTCCGCGGCC
AAATTCCGGCGAGATGTTCGCGAGCAGGCCGGCGGTGCACCCGGTGGAGGCGCCGCCGCC
GCCGGATCCGGCGGAGCAGCCGAGGGGGGTGCTGATGAAGGACCTGCCCGGGATGCCCGG
GACGGCGGGGGGGCTGGGGCTCCGCCTCGCGCAGTTCGCCTTCGCCGCCGTCGCCCTCGC
CGTCATGGCGTCCACCAACGACTTCCCTTCCGTCACATCGTTCTGCTTTCTTGTTGCGGC
AGCCATTTTGCAATGTCTCTGGAGCTTTTCACTAGCAATTGTGGACATATATGCACTGCT
TGTTAAGCGTTGCTTACGAAATCGCCGGGCTGTTTGTCTATTTGCAATTGGTGATGGGAT
CACAGCAGCACTGACCTTCAGTGCCGCATGTGCGTCATCTGGCATCACCGTGTTGATTGA
TAATGATCTAGACCTATGCTCGGAAAATCACTGCGCAAGTTTTGAAAGTGCGACAGCAAT
GGCGTTTCTTAGCTGGTTTGCTCTTTCGCCATCCTTTCTATTGAATTTCTGGTCAATGGC
TTCTGGATGAATGAAAACCAAAGAGGAGGTTAGAGCTTGATTTTTGAATGTATCATGTGC
CCAATTCACCAATTGTGGTTAGTGAGAATTGGATAGCGTGACGCAGCTAATTGTATTAGA
GTTGAAAGCTGATGTGCGGTCTTGGGATCATATGTTTCTAGTATAACTCTGTAAAAAAAG
AATAGGGGATGGCCTGTTTTGCAAGTGTTCAATGTGGAACTCAGTAAAAGTCTCTTAAGC
AAGGTGCTTTCCGTATAAGACTTCCAGCTGGTTGAGTTTTTGTGTGC