Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0205300-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:5495851:5497269:-1 gene:Os03g0205300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 129, ROOT HAIR DEFECTIVE-SIX LIKE 4 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os03t0205300-00)
Sequence	ATGATGGAGTCCTCGGAGGCGAGCTGGCACTCGTTCGATCCGTCAGTCGCAATGGAGGAC TCGGAGGCGATGGCGCAGCTGCTCGGCGTGCAGTACTTCGGCAATGACCAGGAGCAGCAG CAGCCGGCGGCGGCGGCGCCGCCGGCGATGTACTGGCCGGCGCACGACGCGGCCGACCAG TACTACGGCTCGGCGCCATACTGCTACATGCAGCAGCAGCAGCATTACGGGTGCTACGAC GGCGGCGCGATGGTGGCCGGCGGCGACTTCTTCGTGCCGGAGGAGCAGCTGGTGGCCGAC CCGAGCTTCATGGTGGACCTGAACCTCGAGTTCGAGGACCAGCACGGCGGCGATGCTGGC GGCGCTGGGAGCAGCGCCGCCGCCGCCGCCGCCGCCACCAAGATGACACCGGCGTGCAAG AGGAAGGTTGAGGATCACAAGGATGAGAGCTGCACGGACAACGTCGCGAGGAAGAAGGCG CGCTCCACGGCAGCAACAGTGGTGCAGAAGAAGGGTAATAAGAACGCGCAGTCAAAGAAG GCGCAGAAGGGCGCGTGCAGCCGGAGCAGCAACCAGAAGGAGAGCAATGGCGGCGGCGAC GGCGGCAATGTGCAGAGCTCGAGCACCAACTACCTCTCTGATGACGACTCGCTGTCGCTG GAGATGACTTCGTGCAGCAACGTGAGCTCGGCGTCCAAGAAGTCGTCGTTGTCATCGCCG GCGACCGGGCACGGCGGCGCGAAGGCGAGGGCCGGGCGCGGGGCGGCGACCGATCCGCAA AGCCTCTATGCCAGGAAGAGGAGAGAAAGGATCAATGAACGGCTAAAGATACTGCAGAAT CTTATCCCAAATGGAACCAAGGTGGACATCAGCACGATGCTTGAAGAAGCAGTTCACTAC GTCAAGTTCTTGCAGCTCCAAATCAAGCTTCTGAGCTCGGATGATATGTGGATGTTCGCG CCGATCGCGTACAACGGGGTCAACGTCGGGCTCGACCTCAAGATCTCTCCACCGCAGCAG CAATGA

Peptide Sequence

PEP ID	Os03t0205300-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:5495851:5497269:-1 gene:Os03g0205300 transcript:Os03t0205300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 129, ROOT HAIR DEFECTIVE-SIX LIKE 4 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os03t0205300-00)
Sequence	MMESSEASWHSFDPSVAMEDSEAMAQLLGVQYFGNDQEQQQPAAAAPPAMYWPAHDAADQ YYGSAPYCYMQQQQHYGCYDGGAMVAGGDFFVPEEQLVADPSFMVDLNLEFEDQHGGDAG GAGSSAAAAAAATKMTPACKRKVEDHKDESCTDNVARKKARSTAATVVQKKGNKNAQSKK AQKGACSRSSNQKESNGGGDGGNVQSSSTNYLSDDDSLSLEMTSCSNVSSASKKSSLSSP ATGHGGAKARAGRGAATDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHY VKFLQLQIKLLSSDDMWMFAPIAYNGVNVGLDLKISPPQQQ

Transcript Sequence

Transcript ID	Os03t0205300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5495851:5497269:-1 gene:Os03g0205300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 129, ROOT HAIR DEFECTIVE-SIX LIKE 4 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os03t0205300-00)
Sequence	ATGATGGAGTCCTCGGAGGCGAGCTGGCACTCGTTCGATCCGTCAGTCGCAATGGAGGAC TCGGAGGCGATGGCGCAGCTGCTCGGCGTGCAGTACTTCGGCAATGACCAGGAGCAGCAG CAGCCGGCGGCGGCGGCGCCGCCGGCGATGTACTGGCCGGCGCACGACGCGGCCGACCAG TACTACGGCTCGGCGCCATACTGCTACATGCAGCAGCAGCAGCATTACGGGTGCTACGAC GGCGGCGCGATGGTGGCCGGCGGCGACTTCTTCGTGCCGGAGGAGCAGCTGGTGGCCGAC CCGAGCTTCATGGTGGACCTGAACCTCGAGTTCGAGGACCAGCACGGCGGCGATGCTGGC GGCGCTGGGAGCAGCGCCGCCGCCGCCGCCGCCGCCACCAAGATGACACCGGCGTGCAAG AGGAAGGTTGAGGATCACAAGGATGAGAGCTGCACGGACAACGTCGCGAGGAAGAAGGCG CGCTCCACGGCAGCAACAGTGGTGCAGAAGAAGGGTAATAAGAACGCGCAGTCAAAGAAG GCGCAGAAGGGCGCGTGCAGCCGGAGCAGCAACCAGAAGGAGAGCAATGGCGGCGGCGAC GGCGGCAATGTGCAGAGCTCGAGCACCAACTACCTCTCTGATGACGACTCGCTGTCGCTG GAGATGACTTCGTGCAGCAACGTGAGCTCGGCGTCCAAGAAGTCGTCGTTGTCATCGCCG GCGACCGGGCACGGCGGCGCGAAGGCGAGGGCCGGGCGCGGGGCGGCGACCGATCCGCAA AGCCTCTATGCCAGGAAGAGGAGAGAAAGGATCAATGAACGGCTAAAGATACTGCAGAAT CTTATCCCAAATGGAACCAAGGTGGACATCAGCACGATGCTTGAAGAAGCAGTTCACTAC GTCAAGTTCTTGCAGCTCCAAATCAAGCTTCTGAGCTCGGATGATATGTGGATGTTCGCG CCGATCGCGTACAACGGGGTCAACGTCGGGCTCGACCTCAAGATCTCTCCACCGCAGCAG CAATGA